FFCP PHASE1:Hg19::chr10:26505387..26505457,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2572|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4093|TSSclassifier=S|UniProt=Q05329|association_with_transcript=-136bp_to_ENST00000259271_5end|coexpression_cluster_id=C1309|description=CAGE_peak_2_at_GAD2_5end|id=chr10:26505387..26505457,+|ontology_enrichment_celltype=CL:0000047!6.58e-08!8;CL:0000064!5.54e-07!3;CL:0005012!5.54e-07!3;CL:0000067!5.54e-07!3;CL:0002304!5.54e-07!3;CL:0002322!6.42e-07!5|ontology_enrichment_celltype_v019=CL:0000047;4.64e-07;2|ontology_enrichment_celltype_v019_2=CL:0000047,5.16e-10,8|ontology_enrichment_development_v019=UBERON:0006601;3.23e-15;82!UBERON:0006215;3.14e-09;3!UBERON:0010122;6.27e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.33e-100!57;UBERON:0005068!6.33e-100!57;UBERON:0006241!6.33e-100!57;UBERON:0007135!6.33e-100!57;UBERON:0001017!4.68e-97!82;UBERON:0005743!5.66e-95!86;UBERON:0002616!8.47e-85!59;UBERON:0000073!1.43e-84!94;UBERON:0001016!1.43e-84!94;UBERON:0002780!4.97e-84!41;UBERON:0001890!4.97e-84!41;UBERON:0006240!4.97e-84!41;UBERON:0003080!8.69e-82!42;UBERON:0003075!3.36e-81!86;UBERON:0007284!3.36e-81!86;UBERON:0000955!8.44e-80!69;UBERON:0006238!8.44e-80!69;UBERON:0001893!3.31e-78!34;UBERON:0002020!6.50e-78!34;UBERON:0003528!6.50e-78!34;UBERON:0002346!6.52e-77!90;UBERON:0002791!7.64e-76!33;UBERON:0001869!2.13e-74!32;UBERON:0003056!9.54e-68!61;UBERON:0000956!1.47e-57!25;UBERON:0000203!1.47e-57!25;UBERON:0002619!1.84e-52!22;UBERON:0000033!3.64e-50!123;UBERON:0001950!3.13e-48!20;UBERON:0000153!3.92e-47!129;UBERON:0007811!3.92e-47!129;UBERON:0004121!9.30e-47!169;UBERON:0000924!2.69e-45!173;UBERON:0006601!2.69e-45!173;UBERON:0007023!1.50e-44!115;UBERON:0002420!1.12e-21!9;UBERON:0007245!1.12e-21!9;UBERON:0010009!1.12e-21!9;UBERON:0010011!1.12e-21!9;UBERON:0000454!1.12e-21!9;UBERON:0002308!3.21e-21!9;UBERON:0000125!3.21e-21!9;UBERON:0000025!1.79e-19!194;UBERON:0001871!4.94e-19!7;UBERON:0003076!8.65e-19!15;UBERON:0003057!8.65e-19!15;UBERON:0009663!2.29e-17!7;UBERON:0000200!1.16e-14!6;UBERON:0000064!8.09e-14!219;UBERON:0004733!1.67e-13!12;UBERON:0002028!1.67e-13!12;UBERON:0007277!1.67e-13!12;UBERON:0004111!4.61e-13!241;UBERON:0001872!7.53e-13!5;UBERON:0002021!1.08e-12!5;UBERON:0002298!1.55e-12!8;UBERON:0000349!1.66e-12!5;UBERON:0004732!2.50e-12!13;UBERON:0000483!2.75e-12!309;UBERON:0000119!4.99e-12!312;UBERON:0000477!1.48e-11!286;UBERON:0000369!2.38e-11!4;UBERON:0002435!2.38e-11!4;UBERON:0000204!2.38e-11!4;UBERON:0010082!2.38e-11!4;UBERON:0000475!1.63e-10!365;UBERON:0005383!5.64e-09!3;UBERON:0005382!5.64e-09!3;UBERON:0000922!7.74e-09!612;UBERON:0002680!1.48e-08!9;UBERON:0001895!1.48e-08!9;UBERON:0010092!1.48e-08!9;UBERON:0001894!2.92e-08!7;UBERON:0006222!2.92e-08!7;UBERON:0000062!4.67e-08!511;UBERON:0002771!6.24e-08!3;UBERON:0000988!2.49e-07!3;UBERON:0006331!2.85e-07!3;UBERON:0002240!2.92e-07!3;UBERON:0001896!4.45e-07!3;UBERON:0005290!4.45e-07!3;UBERON:0010096!4.45e-07!3;UBERON:0001778!5.54e-07!3;UBERON:0001775!5.54e-07!3;UBERON:0000468!8.40e-07!659|ontology_enrichment_uberon_v019=UBERON:0001869;7.50e-72;32!UBERON:0001893;1.17e-68;34!UBERON:0003528;1.55e-68;34!UBERON:0002020;1.55e-68;34!UBERON:0002791;1.74e-67;32!UBERON:0002619;2.95e-67;22!UBERON:0001950;9.31e-62;20!UBERON:0002780;1.83e-60;41!UBERON:0001890;1.83e-60;41!UBERON:0000956;9.68e-59;25!UBERON:0000203;9.68e-59;25!UBERON:0000073;5.03e-50;53!UBERON:0002616;5.03e-50;53!UBERON:0001017;2.17e-37;75!UBERON:0000955;8.52e-36;68!UBERON:0001016;1.24e-30;83!UBERON:0002420;2.43e-22;9!UBERON:0007245;2.43e-22;9!UBERON:0010009;2.43e-22;9!UBERON:0010011;2.43e-22;9!UBERON:0000454;2.43e-22;9!UBERON:0000125;8.42e-22;9!UBERON:0002308;8.42e-22;9!UBERON:0001871;1.82e-21;6!UBERON:0000200;1.82e-18;6!UBERON:0009663;8.06e-17;7!UBERON:0001872;4.69e-16;5!UBERON:0002021;7.59e-16;5!UBERON:0000349;1.05e-15;5!UBERON:0000369;3.56e-14;4!UBERON:0002435;3.56e-14;4!UBERON:0000204;3.56e-14;4!UBERON:0007023;2.77e-13;114!UBERON:0011216;2.24e-12;132!UBERON:0005383;4.07e-11;3!UBERON:0005382;4.07e-11;3!UBERON:0004733;1.09e-10;12!UBERON:0002028;1.09e-10;12!UBERON:0001870;3.73e-10;3!UBERON:0004732;8.56e-10;13!UBERON:0010314;6.30e-09;132!UBERON:0001873;6.27e-08;2!UBERON:0002680;8.75e-08;9!UBERON:0001895;8.75e-08;9!UBERON:0002298;1.10e-07;6!UBERON:0001875;2.70e-07;2!UBERON:0006514;2.70e-07;2!UBERON:0001876;2.83e-07;2!UBERON:0001894;3.42e-07;7!UBERON:0002702;3.69e-07;2!UBERON:0002771;4.04e-07;2!UBERON:0001897;4.79e-07;2!UBERON:0001954;4.79e-07;2!UBERON:0003022;4.79e-07;2!UBERON:0002421;4.79e-07;2!UBERON:0010225;4.79e-07;2!UBERON:0002600;4.79e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.98e-95,56;UBERON:0005068,2.98e-95,56;UBERON:0006241,2.98e-95,56;UBERON:0007135,2.98e-95,56;UBERON:0001017,1.44e-94,81;UBERON:0000073,6.34e-92,53;UBERON:0002616,6.34e-92,53;UBERON:0002780,3.55e-84,41;UBERON:0001890,3.55e-84,41;UBERON:0003080,3.55e-84,41;UBERON:0006240,3.55e-84,41;UBERON:0001016,4.50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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2572 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4093 | |||
|TSSclassifier=S | |||
|UniProt=Q05329 | |||
|association_with_transcript=-136bp_to_ENST00000259271_5end | |||
|coexpression_cluster_id=C1309 | |||
|description=CAGE_peak_2_at_GAD2_5end | |||
|id=chr10:26505387..26505457,+ | |||
|ontology_enrichment_celltype=CL:0000047!6.58e-08!8;CL:0000064!5.54e-07!3;CL:0005012!5.54e-07!3;CL:0000067!5.54e-07!3;CL:0002304!5.54e-07!3;CL:0002322!6.42e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.16e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.23e-15;82!UBERON:0006215;3.14e-09;3!UBERON:0010122;6.27e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@GAD2 | |||
}} |
Revision as of 12:57, 10 September 2013
Short description: | p2@GAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GAD2_5end |
Coexpression cluster: | C1309_putamen_parietal_caudate_temporal_duodenum_Neurons_occipital |
Association with transcript: | -136bp_to_ENST00000259271_5end |
EntrezGene: | GAD2 |
HGNC: | 4093 |
UniProt: | Q05329 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.16e-10 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.