FFCP PHASE1:Hg19::chr10:45869811..45869822,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=240|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=435|TSSclassifier=S|UniProt=E5FPY5,B7ZLS0,E5FPY7,E5FPY8|association_with_transcript=83bp_to_HM592258,HM592259,HM592260,HM592261_5end|coexpression_cluster_id=C17|description=CAGE_peak_4_at_ALOX5_5end|id=chr10:45869811..45869822,+|ontology_enrichment_celltype=CL:0002057!2.52e-53!42;CL:0000766!8.77e-50!76;CL:0000557!1.67e-49!71;CL:0000860!5.73e-49!45;CL:0000839!3.65e-45!70;CL:0002009!4.08e-45!65;CL:0000738!1.90e-42!140;CL:0002194!1.14e-41!63;CL:0000576!1.14e-41!63;CL:0000040!1.14e-41!63;CL:0000559!1.14e-41!63;CL:0002031!4.62e-38!124;CL:0000763!6.60e-37!112;CL:0000049!6.60e-37!112;CL:0000037!1.73e-33!172;CL:0000566!1.73e-33!172;CL:0002032!3.80e-33!165;CL:0000837!3.80e-33!165;CL:0002087!4.36e-33!119;CL:0000988!1.32e-30!182;CL:0000134!1.55e-07!358;CL:0002393!4.01e-07!9;CL:0002397!4.01e-07!9;CL:0002320!4.27e-07!365|ontology_enrichment_celltype_v019=CL:0000473;1.63e-22;39!CL:0000234;1.63e-22;39!CL:0000860;1.20e-21;33!CL:0002057;1.20e-21;33!CL:0001014;5.15e-16;2!CL:0001016;5.15e-16;2!CL:0000766;1.98e-13;69!CL:0000576;3.43e-13;48!CL:0000738;4.04e-08;136!CL:0000453;6.47e-07;5|ontology_enrichment_celltype_v019_2=CL:0000557,1.15e-30,67;CL:0000473,2.27e-30,48;CL:0000234,2.27e-30,48;CL:0002009,5.49e-30,61;CL:0000766,2.35e-28,72;CL:0000860,3.70e-26,42;CL:0002057,3.70e-26,42;CL:0000839,3.83e-24,66;CL:0002194,9.85e-24,59;CL:0000576,9.85e-24,59;CL:0000040,9.85e-24,59;CL:0000559,9.85e-24,59;CL:0000763,1.20e-22,108;CL:0000049,1.20e-22,108;CL:0000738,3.18e-19,136;CL:0002031,1.02e-17,120;CL:0001014,5.56e-16,2;CL:0001016,5.56e-16,2;CL:0002032,1.20e-15,161;CL:0000837,1.20e-15,161;CL:0000037,7.75e-15,168;CL:0000988,6.92e-14,177;CL:0002087,1.45e-12,115;CL:0000453,6.67e-07,5|ontology_enrichment_development_v019=CL:0002057;3.11e-21;42!UBERON:0005425;2.20e-08;1!CL:0000049;2.68e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.43e-50!102;UBERON:0003061!7.43e-50!102;UBERON:0002193!1.74e-47!112;UBERON:0002371!2.51e-42!80;UBERON:0001474!2.23e-38!86;UBERON:0002405!1.07e-36!115;UBERON:0004765!4.63e-32!101;UBERON:0001434!4.63e-32!101;UBERON:0003081!5.18e-18!216;UBERON:0002204!1.01e-14!167;UBERON:0000178!2.60e-07!15;UBERON:0000179!2.60e-07!15;UBERON:0000463!2.60e-07!15|ontology_enrichment_uberon_v019=UBERON:0000941;2.20e-08;1!UBERON:0002171;2.20e-08;1!UBERON:0001785;2.20e-08;1!UBERON:0002464;2.20e-08;1!UBERON:0004904;2.20e-08;1!UBERON:0001021;2.20e-08;1!UBERON:0006518;2.20e-08;1!UBERON:0008949;2.20e-08;1!UBERON:0000101;2.20e-08;1!UBERON:0002167;2.20e-08;1!UBERON:0000178;8.52e-08;15!UBERON:0000179;8.52e-08;15!UBERON:0000463;8.52e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.34e-31,98;UBERON:0003061,6.34e-31,98;UBERON:0002193,1.01e-27,108;UBERON:0002371,1.11e-26,76;UBERON:0001474,1.66e-24,82;UBERON:0004765,4.74e-22,90;UBERON:0002405,3.08e-21,93;UBERON:0001434,1.58e-19,100;UBERON:0003081,6.39e-13,203;UBERON:0002204,2.32e-10,167;UBERON:0000941,1.37e-08,1;UBERON:0001785,1.37e-08,1;UBERON:0002464,1.37e-08,1;UBERON:0004904,1.37e-08,1;UBERON:0001021,1.37e-08,1;UBERON:0003902,1.37e-08,1;UBERON:0005425,1.37e-08,1;UBERON:0002171,2.13e-08,1;UBERON:0006518,2.13e-08,1;UBERON:0008949,2.13e-08,1;UBERON:0000101,2.13e-08,1;UBERON:0002167,2.13e-08,1;UBERON:0000178,9.25e-08,15;UBERON:0000179,9.25e-08,15;UBERON:0000463,9.25e-08,15;UBERON:0000926,7.17e-07,315;UBERON:0004120,7.17e-07,315;UBERON:0006603,7.17e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0.387336002901508,0.142169232487422,0,0,1.00272223735071,0.434021741431704,0,0,0,0.436194716338694,1.51150377475524,0.727752183563449,1.39457422143411,1.23350366406548,0.619412741790207,0.863077176966451,0.512321413058201,0.236482229888585,0.689491361473237,1.29096936716765,0,0.941211697713023,0.545812300115692,0.449446968890169,0.306083892370903,0.320929027076094,1.27867425159808,2.30895910130701,1.19678194572979,2.55734850319616,0.870627715885752,0,0,0.75374599577023,2.60741459210101,1.95469960234605,0.605399502633369,1.10483290796269,0.632924774881769,1.05627643155971,0.425208599930087,0.209658645508376,0.673971786878971,0.450530678524519,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,1.1384259382189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0.141775097242386,0,0,0,44.8323546485309,0.264145302039678,0,0.720599767084807,0.37872730027914,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=240 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=435 | |||
|TSSclassifier=S | |||
|UniProt=E5FPY5,B7ZLS0,E5FPY7,E5FPY8 | |||
|association_with_transcript=83bp_to_HM592258,HM592259,HM592260,HM592261_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_ALOX5_5end | |||
|id=chr10:45869811..45869822,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.52e-53!42;CL:0000766!8.77e-50!76;CL:0000557!1.67e-49!71;CL:0000860!5.73e-49!45;CL:0000839!3.65e-45!70;CL:0002009!4.08e-45!65;CL:0000738!1.90e-42!140;CL:0002194!1.14e-41!63;CL:0000576!1.14e-41!63;CL:0000040!1.14e-41!63;CL:0000559!1.14e-41!63;CL:0002031!4.62e-38!124;CL:0000763!6.60e-37!112;CL:0000049!6.60e-37!112;CL:0000037!1.73e-33!172;CL:0000566!1.73e-33!172;CL:0002032!3.80e-33!165;CL:0000837!3.80e-33!165;CL:0002087!4.36e-33!119;CL:0000988!1.32e-30!182;CL:0000134!1.55e-07!358;CL:0002393!4.01e-07!9;CL:0002397!4.01e-07!9;CL:0002320!4.27e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.63e-22;39!CL:0000234;1.63e-22;39!CL:0000860;1.20e-21;33!CL:0002057;1.20e-21;33!CL:0001014;5.15e-16;2!CL:0001016;5.15e-16;2!CL:0000766;1.98e-13;69!CL:0000576;3.43e-13;48!CL:0000738;4.04e-08;136!CL:0000453;6.47e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.15e-30,67;CL:0000473,2.27e-30,48;CL:0000234,2.27e-30,48;CL:0002009,5.49e-30,61;CL:0000766,2.35e-28,72;CL:0000860,3.70e-26,42;CL:0002057,3.70e-26,42;CL:0000839,3.83e-24,66;CL:0002194,9.85e-24,59;CL:0000576,9.85e-24,59;CL:0000040,9.85e-24,59;CL:0000559,9.85e-24,59;CL:0000763,1.20e-22,108;CL:0000049,1.20e-22,108;CL:0000738,3.18e-19,136;CL:0002031,1.02e-17,120;CL:0001014,5.56e-16,2;CL:0001016,5.56e-16,2;CL:0002032,1.20e-15,161;CL:0000837,1.20e-15,161;CL:0000037,7.75e-15,168;CL:0000988,6.92e-14,177;CL:0002087,1.45e-12,115;CL:0000453,6.67e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.11e-21;42!UBERON:0005425;2.20e-08;1!CL:0000049;2.68e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.43e-50!102;UBERON:0003061!7.43e-50!102;UBERON:0002193!1.74e-47!112;UBERON:0002371!2.51e-42!80;UBERON:0001474!2.23e-38!86;UBERON:0002405!1.07e-36!115;UBERON:0004765!4.63e-32!101;UBERON:0001434!4.63e-32!101;UBERON:0003081!5.18e-18!216;UBERON:0002204!1.01e-14!167;UBERON:0000178!2.60e-07!15;UBERON:0000179!2.60e-07!15;UBERON:0000463!2.60e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.20e-08;1!UBERON:0002171;2.20e-08;1!UBERON:0001785;2.20e-08;1!UBERON:0002464;2.20e-08;1!UBERON:0004904;2.20e-08;1!UBERON:0001021;2.20e-08;1!UBERON:0006518;2.20e-08;1!UBERON:0008949;2.20e-08;1!UBERON:0000101;2.20e-08;1!UBERON:0002167;2.20e-08;1!UBERON:0000178;8.52e-08;15!UBERON:0000179;8.52e-08;15!UBERON:0000463;8.52e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.34e-31,98;UBERON:0003061,6.34e-31,98;UBERON:0002193,1.01e-27,108;UBERON:0002371,1.11e-26,76;UBERON:0001474,1.66e-24,82;UBERON:0004765,4.74e-22,90;UBERON:0002405,3.08e-21,93;UBERON:0001434,1.58e-19,100;UBERON:0003081,6.39e-13,203;UBERON:0002204,2.32e-10,167;UBERON:0000941,1.37e-08,1;UBERON:0001785,1.37e-08,1;UBERON:0002464,1.37e-08,1;UBERON:0004904,1.37e-08,1;UBERON:0001021,1.37e-08,1;UBERON:0003902,1.37e-08,1;UBERON:0005425,1.37e-08,1;UBERON:0002171,2.13e-08,1;UBERON:0006518,2.13e-08,1;UBERON:0008949,2.13e-08,1;UBERON:0000101,2.13e-08,1;UBERON:0002167,2.13e-08,1;UBERON:0000178,9.25e-08,15;UBERON:0000179,9.25e-08,15;UBERON:0000463,9.25e-08,15;UBERON:0000926,7.17e-07,315;UBERON:0004120,7.17e-07,315;UBERON:0006603,7.17e-07,315 | |||
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|short_description=p4@ALOX5 | |||
}} |
Revision as of 13:28, 10 September 2013
Short description: | p4@ALOX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ALOX5_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 83bp_to_HM592258, HM592259, HM592260, HM592261_5end |
EntrezGene: | ALOX5 |
HGNC: | 435 |
UniProt: | E5FPY5B7ZLS0E5FPY7E5FPY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.15e-30 | 67 |
defensive cell | 2.27e-30 | 48 |
phagocyte | 2.27e-30 | 48 |
macrophage dendritic cell progenitor | 5.49e-30 | 61 |
myeloid leukocyte | 2.35e-28 | 72 |
classical monocyte | 3.70e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.70e-26 | 42 |
myeloid lineage restricted progenitor cell | 3.83e-24 | 66 |
monopoietic cell | 9.85e-24 | 59 |
monocyte | 9.85e-24 | 59 |
monoblast | 9.85e-24 | 59 |
promonocyte | 9.85e-24 | 59 |
myeloid cell | 1.20e-22 | 108 |
common myeloid progenitor | 1.20e-22 | 108 |
leukocyte | 3.18e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 1.02e-17 | 120 |
CD1a-positive Langerhans cell | 5.56e-16 | 2 |
immature CD1a-positive Langerhans cell | 5.56e-16 | 2 |
hematopoietic oligopotent progenitor cell | 1.20e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-15 | 161 |
hematopoietic stem cell | 7.75e-15 | 168 |
hematopoietic cell | 6.92e-14 | 177 |
nongranular leukocyte | 1.45e-12 | 115 |
Langerhans cell | 6.67e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.34e-31 | 98 |
blood island | 6.34e-31 | 98 |
hemolymphoid system | 1.01e-27 | 108 |
bone marrow | 1.11e-26 | 76 |
bone element | 1.66e-24 | 82 |
skeletal element | 4.74e-22 | 90 |
immune system | 3.08e-21 | 93 |
skeletal system | 1.58e-19 | 100 |
lateral plate mesoderm | 6.39e-13 | 203 |
musculoskeletal system | 2.32e-10 | 167 |
cranial nerve II | 1.37e-08 | 1 |
cranial nerve | 1.37e-08 | 1 |
nerve trunk | 1.37e-08 | 1 |
nerve connecting eye with brain | 1.37e-08 | 1 |
nerve | 1.37e-08 | 1 |
retinal neural layer | 1.37e-08 | 1 |
presumptive neural retina | 1.37e-08 | 1 |
lower lobe of right lung | 2.13e-08 | 1 |
right lung lobe | 2.13e-08 | 1 |
lower lobe of lung | 2.13e-08 | 1 |
lobe of lung | 2.13e-08 | 1 |
right lung | 2.13e-08 | 1 |
blood | 9.25e-08 | 15 |
haemolymphatic fluid | 9.25e-08 | 15 |
organism substance | 9.25e-08 | 15 |
mesoderm | 7.17e-07 | 315 |
mesoderm-derived structure | 7.17e-07 | 315 |
presumptive mesoderm | 7.17e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.