FFCP PHASE1:Hg19::chr10:86004802..86004815,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5995|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9990|TSSclassifier=W|UniProt=P47804,Q96HT6|association_with_transcript=0bp_to_ENST00000359452,ENST00000469446,ENST00000478727,NM_001012720,NM_001012722,NM_002921,uc001kdb.1,uc001kdc.1,uc001kdd.1,uc001kde.1_5end|coexpression_cluster_id=C41|description=CAGE_peak_1_at_RGR_5end|id=chr10:86004802..86004815,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;3.44e-19;82!UBERON:0010122;2.03e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.11e-78!57;UBERON:0005068!4.11e-78!57;UBERON:0006241!4.11e-78!57;UBERON:0007135!4.11e-78!57;UBERON:0005743!7.33e-72!86;UBERON:0001017!3.47e-67!82;UBERON:0003075!4.81e-67!86;UBERON:0007284!4.81e-67!86;UBERON:0000073!5.02e-66!94;UBERON:0001016!5.02e-66!94;UBERON:0002780!7.25e-66!41;UBERON:0001890!7.25e-66!41;UBERON:0006240!7.25e-66!41;UBERON:0002616!2.09e-65!59;UBERON:0003080!4.70e-64!42;UBERON:0002346!2.31e-63!90;UBERON:0000955!1.23e-61!69;UBERON:0006238!1.23e-61!69;UBERON:0001893!7.74e-60!34;UBERON:0002020!1.44e-59!34;UBERON:0003528!1.44e-59!34;UBERON:0002791!9.46e-58!33;UBERON:0001869!2.69e-56!32;UBERON:0007023!2.39e-54!115;UBERON:0003056!1.99e-51!61;UBERON:0000956!1.17e-41!25;UBERON:0000203!1.17e-41!25;UBERON:0000153!1.80e-39!129;UBERON:0007811!1.80e-39!129;UBERON:0000033!1.12e-38!123;UBERON:0004121!4.38e-38!169;UBERON:0002619!5.89e-37!22;UBERON:0000924!8.29e-37!173;UBERON:0006601!8.29e-37!173;UBERON:0001950!7.73e-33!20;UBERON:0002420!7.56e-20!9;UBERON:0007245!7.56e-20!9;UBERON:0010009!7.56e-20!9;UBERON:0010011!7.56e-20!9;UBERON:0000454!7.56e-20!9;UBERON:0002308!3.86e-19!9;UBERON:0000125!3.86e-19!9;UBERON:0000025!2.11e-18!194;UBERON:0000483!1.83e-17!309;UBERON:0000119!4.01e-17!312;UBERON:0009663!1.73e-15!7;UBERON:0003076!5.67e-15!15;UBERON:0003057!5.67e-15!15;UBERON:0000200!2.06e-14!6;UBERON:0001871!3.42e-14!7;UBERON:0000064!5.12e-14!219;UBERON:0000475!1.28e-13!365;UBERON:0004111!1.56e-13!241;UBERON:0002298!2.73e-12!8;UBERON:0000349!3.29e-12!5;UBERON:0000477!4.73e-11!286;UBERON:0004733!2.59e-10!12;UBERON:0002028!2.59e-10!12;UBERON:0007277!2.59e-10!12;UBERON:0000369!4.13e-10!4;UBERON:0002435!4.13e-10!4;UBERON:0000204!4.13e-10!4;UBERON:0010082!4.13e-10!4;UBERON:0000481!1.15e-09!347;UBERON:0004732!2.11e-09!13;UBERON:0000922!2.52e-09!612;UBERON:0000062!2.91e-09!511;UBERON:0002771!3.66e-08!3;UBERON:0000468!3.69e-08!659;UBERON:0000467!4.21e-08!625;UBERON:0005383!4.29e-08!3;UBERON:0005382!4.29e-08!3;UBERON:0000480!4.70e-08!626;UBERON:0001872!5.06e-08!5;UBERON:0000923!5.64e-08!604;UBERON:0005291!5.64e-08!604;UBERON:0006598!5.64e-08!604;UBERON:0002532!5.64e-08!604;UBERON:0002050!6.30e-08!605;UBERON:0005423!6.30e-08!605;UBERON:0001894!7.83e-08!7;UBERON:0006222!7.83e-08!7;UBERON:0002021!7.98e-08!5;UBERON:0001896!2.24e-07!3;UBERON:0005290!2.24e-07!3;UBERON:0010096!2.24e-07!3;UBERON:0000988!4.83e-07!3;UBERON:0002240!8.47e-07!3;UBERON:0006331!8.83e-07!3|ontology_enrichment_uberon_v019=UBERON:0001869;4.85e-67;32!UBERON:0001893;7.63e-67;34!UBERON:0003528;5.42e-65;34!UBERON:0002020;5.42e-65;34!UBERON:0002791;2.20e-62;32!UBERON:0002619;2.37e-58;22!UBERON:0002780;5.93e-58;41!UBERON:0001890;5.93e-58;41!UBERON:0001950;3.09e-51;20!UBERON:0000956;4.77e-51;25!UBERON:0000203;4.77e-51;25!UBERON:0000073;8.52e-43;53!UBERON:0002616;8.52e-43;53!UBERON:0001017;4.64e-32;75!UBERON:0000955;2.00e-31;68!UBERON:0002420;2.86e-27;9!UBERON:0007245;2.86e-27;9!UBERON:0010009;2.86e-27;9!UBERON:0010011;2.86e-27;9!UBERON:0000454;2.86e-27;9!UBERON:0000125;3.23e-26;9!UBERON:0002308;3.23e-26;9!UBERON:0000200;7.73e-24;6!UBERON:0001016;4.36e-21;83!UBERON:0000349;4.90e-20;5!UBERON:0009663;7.91e-20;7!UBERON:0000369;2.32e-16;4!UBERON:0002435;2.32e-16;4!UBERON:0000204;2.32e-16;4!UBERON:0001871;1.50e-14;6!UBERON:0001872;4.47e-13;5!UBERON:0001870;6.15e-13;3!UBERON:0005383;6.79e-13;3!UBERON:0005382;6.79e-13;3!UBERON:0002021;9.35e-13;5!UBERON:0007023;1.64e-12;114!UBERON:0002298;4.02e-10;6!UBERON:0001873;2.03e-09;2!UBERON:0001876;2.39e-09;2!UBERON:0002702;2.44e-09;2!UBERON:0002784;2.96e-09;4!UBERON:0002771;4.02e-09;2!UBERON:0011216;4.33e-09;132!UBERON:0001954;6.10e-09;2!UBERON:0003022;6.10e-09;2!UBERON:0002421;6.10e-09;2!UBERON:0002600;6.10e-09;2!UBERON:0001894;8.27e-09;7!UBERON:0001897;1.05e-08;2!UBERON:0010225;1.05e-08;2!UBERON:0001875;1.30e-08;2!UBERON:0006514;1.30e-08;2!UBERON:0010314;3.19e-08;132!UBERON:0002148;3.77e-08;2!UBERON:0006331;3.77e-08;2!UBERON:0009662;3.77e-08;2!UBERON:0000966;1.67e-07;5!UBERON:0005388;1.67e-07;5!UBERON:0001802;1.67e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002780,6.18e-83,41;UBERON:0001890,6.18e-83,41;UBERON:0003080,6.18e-83,41;UBERON:0006240,6.18e-83,41;UBERON:0000073,9.30e-81,53;UBERON:0002616,9.30e-81,53;UBERON:0001049,1.46e-80,56;UBERON:0005068,1.46e-80,56;UBERON:0006241,1.46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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5995 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9990 | |||
|TSSclassifier=W | |||
|UniProt=P47804,Q96HT6 | |||
|association_with_transcript=0bp_to_ENST00000359452,ENST00000469446,ENST00000478727,NM_001012720,NM_001012722,NM_002921,uc001kdb.1,uc001kdc.1,uc001kdd.1,uc001kde.1_5end | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_1_at_RGR_5end | |||
|id=chr10:86004802..86004815,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.44e-19;82!UBERON:0010122;2.03e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@RGR | |||
}} |
Revision as of 14:43, 10 September 2013
Short description: | p1@RGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RGR_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000359452, ENST00000469446, ENST00000478727, NM_001012720, NM_001012722, NM_002921, uc001kdb.1, uc001kdc.1, uc001kdd.1, uc001kde.1_5end |
EntrezGene: | RGR |
HGNC: | 9990 |
UniProt: | P47804Q96HT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.