FFCP PHASE1:Hg19::chr12:16760195..16760207,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55885|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6643|TSSclassifier=S|UniProt=Q05D86|association_with_transcript=-76bp_to_ENST00000536172_5end|description=CAGE_peak_13_at_LMO3_5end|id=chr12:16760195..16760207,-|ontology_enrichment_celltype=CL:0000136!1.11e-07!15|ontology_enrichment_celltype_v019=CL:0002615;3.24e-08;3!CL:0000136;8.30e-07;13|ontology_enrichment_celltype_v019_2=CL:0002615,4.72e-08,3|ontology_enrichment_development_v019=UBERON:0000358;6.60e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.16e-63!115;UBERON:0001049!9.05e-36!57;UBERON:0005068!9.05e-36!57;UBERON:0006241!9.05e-36!57;UBERON:0007135!9.05e-36!57;UBERON:0001017!8.43e-33!82;UBERON:0000955!1.96e-32!69;UBERON:0006238!1.96e-32!69;UBERON:0002616!2.20e-32!59;UBERON:0005743!2.81e-32!86;UBERON:0003080!2.84e-31!42;UBERON:0001893!1.44e-30!34;UBERON:0002020!4.31e-30!34;UBERON:0003528!4.31e-30!34;UBERON:0002780!5.50e-30!41;UBERON:0001890!5.50e-30!41;UBERON:0006240!5.50e-30!41;UBERON:0002791!3.29e-29!33;UBERON:0001869!3.66e-28!32;UBERON:0000073!7.91e-28!94;UBERON:0001016!7.91e-28!94;UBERON:0002346!1.74e-27!90;UBERON:0002619!3.98e-25!22;UBERON:0003075!8.72e-25!86;UBERON:0007284!8.72e-25!86;UBERON:0000956!1.48e-23!25;UBERON:0000203!1.48e-23!25;UBERON:0001950!4.55e-22!20;UBERON:0000153!7.22e-21!129;UBERON:0007811!7.22e-21!129;UBERON:0003056!4.76e-20!61;UBERON:0000033!2.84e-18!123;UBERON:0000924!3.81e-16!173;UBERON:0006601!3.81e-16!173;UBERON:0004121!2.63e-14!169;UBERON:0000475!1.97e-11!365;UBERON:0000200!6.39e-10!6;UBERON:0000349!1.64e-09!5;UBERON:0002420!6.58e-09!9;UBERON:0007245!6.58e-09!9;UBERON:0010009!6.58e-09!9;UBERON:0010011!6.58e-09!9;UBERON:0000454!6.58e-09!9;UBERON:0004111!7.79e-09!241;UBERON:0001872!9.51e-09!5;UBERON:0002298!2.45e-08!8;UBERON:0000477!2.57e-08!286;UBERON:0000025!4.86e-08!194;UBERON:0002308!5.72e-08!9;UBERON:0000125!5.72e-08!9;UBERON:0000922!1.03e-07!612;UBERON:0002050!1.28e-07!605;UBERON:0005423!1.28e-07!605;UBERON:0001871!1.53e-07!7;UBERON:0000468!1.76e-07!659;UBERON:0000923!3.09e-07!604;UBERON:0005291!3.09e-07!604;UBERON:0006598!3.09e-07!604;UBERON:0002532!3.09e-07!604|ontology_enrichment_uberon_v019=UBERON:0000349;9.40e-26;5!UBERON:0002791;9.22e-19;32!UBERON:0001869;5.03e-18;32!UBERON:0003528;2.27e-17;34!UBERON:0002020;2.27e-17;34!UBERON:0002619;7.46e-17;22!UBERON:0001893;8.16e-17;34!UBERON:0000956;9.77e-15;25!UBERON:0000203;9.77e-15;25!UBERON:0002420;1.88e-14;9!UBERON:0007245;1.88e-14;9!UBERON:0010009;1.88e-14;9!UBERON:0010011;1.88e-14;9!UBERON:0000454;1.88e-14;9!UBERON:0002780;7.73e-13;41!UBERON:0001890;7.73e-13;41!UBERON:0000369;1.50e-12;4!UBERON:0002435;1.50e-12;4!UBERON:0000204;1.50e-12;4!UBERON:0001876;2.34e-11;2!UBERON:0001954;2.34e-11;2!UBERON:0003022;2.34e-11;2!UBERON:0002421;2.34e-11;2!UBERON:0002600;2.34e-11;2!UBERON:0001950;2.40e-11;20!UBERON:0000073;3.62e-09;53!UBERON:0002616;3.62e-09;53!UBERON:0007023;2.07e-08;114!UBERON:0005383;4.09e-08;3!UBERON:0005382;4.09e-08;3!UBERON:0001870;7.44e-08;3!UBERON:0009663;2.29e-07;7!UBERON:0001871;3.32e-07;6!UBERON:0002022;6.60e-07;1!UBERON:0000955;9.47e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0000349,7.90e-26,5;UBERON:0007023,1.71e-23,114;UBERON:0002791,3.18e-20,32;UBERON:0001869,3.18e-20,32;UBERON:0003528,6.23e-19,34;UBERON:0002020,6.23e-19,34;UBERON:0001893,6.23e-19,34;UBERON:0002619,9.41e-17,22;UBERON:0002780,2.21e-15,41;UBERON:0001890,2.21e-15,41;UBERON:0003080,2.21e-15,41;UBERON:0006240,2.21e-15,41;UBERON:0000956,1.20e-14,25;UBERON:0000203,1.20e-14,25;UBERON:0002420,1.91e-14,9;UBERON:0007245,1.91e-14,9;UBERON:0010009,1.91e-14,9;UBERON:0010011,1.91e-14,9;UBERON:0000454,1.91e-14,9;UBERON:0000073,1.51e-13,53;UBERON:0002616,1.51e-13,53;UBERON:0001049,1.07e-12,56;UBERON:0005068,1.07e-12,56;UBERON:0006241,1.07e-12,56;UBERON:0007135,1.07e-12,56;UBERON:0000369,2.19e-12,4;UBERON:0002435,2.19e-12,4;UBERON:0000204,2.19e-12,4;UBERON:0010082,2.19e-12,4;UBERON:0000955,1.30e-11,68;UBERON:0006238,1.30e-11,68;UBERON:0001876,1.46e-11,2;UBERON:0001954,2.01e-11,2;UBERON:0003022,2.01e-11,2;UBERON:0002421,2.01e-11,2;UBERON:0002600,2.01e-11,2;UBERON:0001950,3.05e-11,20;UBERON:0001017,5.68e-11,81;UBERON:0003056,1.14e-09,61;UBERON:0001016,1.35e-09,89;UBERON:0002346,8.70e-09,86;UBERON:0005383,4.25e-08,3;UBERON:0005382,4.25e-08,3;UBERON:0003075,6.39e-08,82;UBERON:0007284,6.39e-08,82;UBERON:0001870,1.34e-07,3;UBERON:0009663,2.82e-07,7;UBERON:0011216,3.11e-07,223;UBERON:0001871,3.44e-07,6;UBERON:0002022,7.60e-07,1;UBERON:0000996,8.97e-07,1|phase1_expression=1.63510541343501,0.642301571672949,1.12763523276777,0,3.12872766099101,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |||
|TSSclassifier=S | |||
|UniProt=Q05D86 | |||
|association_with_transcript=-76bp_to_ENST00000536172_5end | |||
|description=CAGE_peak_13_at_LMO3_5end | |||
|id=chr12:16760195..16760207,- | |||
|ontology_enrichment_celltype=CL:0000136!1.11e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002615;3.24e-08;3!CL:0000136;8.30e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,4.72e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.60e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.16e-63!115;UBERON:0001049!9.05e-36!57;UBERON:0005068!9.05e-36!57;UBERON:0006241!9.05e-36!57;UBERON:0007135!9.05e-36!57;UBERON:0001017!8.43e-33!82;UBERON:0000955!1.96e-32!69;UBERON:0006238!1.96e-32!69;UBERON:0002616!2.20e-32!59;UBERON:0005743!2.81e-32!86;UBERON:0003080!2.84e-31!42;UBERON:0001893!1.44e-30!34;UBERON:0002020!4.31e-30!34;UBERON:0003528!4.31e-30!34;UBERON:0002780!5.50e-30!41;UBERON:0001890!5.50e-30!41;UBERON:0006240!5.50e-30!41;UBERON:0002791!3.29e-29!33;UBERON:0001869!3.66e-28!32;UBERON:0000073!7.91e-28!94;UBERON:0001016!7.91e-28!94;UBERON:0002346!1.74e-27!90;UBERON:0002619!3.98e-25!22;UBERON:0003075!8.72e-25!86;UBERON:0007284!8.72e-25!86;UBERON:0000956!1.48e-23!25;UBERON:0000203!1.48e-23!25;UBERON:0001950!4.55e-22!20;UBERON:0000153!7.22e-21!129;UBERON:0007811!7.22e-21!129;UBERON:0003056!4.76e-20!61;UBERON:0000033!2.84e-18!123;UBERON:0000924!3.81e-16!173;UBERON:0006601!3.81e-16!173;UBERON:0004121!2.63e-14!169;UBERON:0000475!1.97e-11!365;UBERON:0000200!6.39e-10!6;UBERON:0000349!1.64e-09!5;UBERON:0002420!6.58e-09!9;UBERON:0007245!6.58e-09!9;UBERON:0010009!6.58e-09!9;UBERON:0010011!6.58e-09!9;UBERON:0000454!6.58e-09!9;UBERON:0004111!7.79e-09!241;UBERON:0001872!9.51e-09!5;UBERON:0002298!2.45e-08!8;UBERON:0000477!2.57e-08!286;UBERON:0000025!4.86e-08!194;UBERON:0002308!5.72e-08!9;UBERON:0000125!5.72e-08!9;UBERON:0000922!1.03e-07!612;UBERON:0002050!1.28e-07!605;UBERON:0005423!1.28e-07!605;UBERON:0001871!1.53e-07!7;UBERON:0000468!1.76e-07!659;UBERON:0000923!3.09e-07!604;UBERON:0005291!3.09e-07!604;UBERON:0006598!3.09e-07!604;UBERON:0002532!3.09e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000349;9.40e-26;5!UBERON:0002791;9.22e-19;32!UBERON:0001869;5.03e-18;32!UBERON:0003528;2.27e-17;34!UBERON:0002020;2.27e-17;34!UBERON:0002619;7.46e-17;22!UBERON:0001893;8.16e-17;34!UBERON:0000956;9.77e-15;25!UBERON:0000203;9.77e-15;25!UBERON:0002420;1.88e-14;9!UBERON:0007245;1.88e-14;9!UBERON:0010009;1.88e-14;9!UBERON:0010011;1.88e-14;9!UBERON:0000454;1.88e-14;9!UBERON:0002780;7.73e-13;41!UBERON:0001890;7.73e-13;41!UBERON:0000369;1.50e-12;4!UBERON:0002435;1.50e-12;4!UBERON:0000204;1.50e-12;4!UBERON:0001876;2.34e-11;2!UBERON:0001954;2.34e-11;2!UBERON:0003022;2.34e-11;2!UBERON:0002421;2.34e-11;2!UBERON:0002600;2.34e-11;2!UBERON:0001950;2.40e-11;20!UBERON:0000073;3.62e-09;53!UBERON:0002616;3.62e-09;53!UBERON:0007023;2.07e-08;114!UBERON:0005383;4.09e-08;3!UBERON:0005382;4.09e-08;3!UBERON:0001870;7.44e-08;3!UBERON:0009663;2.29e-07;7!UBERON:0001871;3.32e-07;6!UBERON:0002022;6.60e-07;1!UBERON:0000955;9.47e-07;68 | |||
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|phase1_expression=1.63510541343501,0.642301571672949,1.12763523276777,0,3.12872766099101,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,3.90419561572865,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,1.9882952955326,1.40669416410513,0,0,0,2.98871982376605,0.276283915531148,0,0,0,0,0,0,0,3.45251919729268,0,0,0.969332746095218,0.834912883456661,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0.583209226766509,0,0,2.05013945663194,1.52581736317083,0.221158519862449,0.295547618953547,0.658156191461918,0,0,2.92410982314429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0,0,0,0,0.404406797884062,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,1.16386819786103,0.0882561266915003,0,0,0,1.2029051231617,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.36203406111576,0,0,0,0,0,2.06548492637284,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.640724475406168,2.20086027139532,1.24271716604159,0,0,0,0,0,0.2506898940227,0.612691153526923,0.983617892129413,0,0.886068179966986,0.732157589411779,1.001527445652,0,0.332787154610557,0.558867626472451,0.553394539744923,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86705782949428,0.637724760305049,0.743614585554013,0,0,0,0,0,0,1.15612605173627,0,0.319267718114302,0.615349092722265,0.252071696221718,0.553258019713743,0.968853873791107,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.810451015420736,0.781078098613847,0.620060389503552,0.951237152908602,1.64092442705466,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0,0.455324382702595,0,0,0,0.339848664884159,0.789273282754189,0.945550727071746,0,1.56986185701028,1.57115589916002,0,0,0,0,0.929195074296532,0,0,0,0,0,0,0,1.29068207646083,0,0,1.69354820076372,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,7.84474629612498,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,0,1.08786384305464,0.872701380680755,0,0,0.462175628631418,0,0,0,0.253397002022874,0,0,0,0,0.378893491091197,0,0,0.724030971033267,0.639701945702943,0.952257725854961,0.322944549180031,0.682821857254437,0.448527450322454,2.67318064768293,0.808468755832877,0.217716747896961,0,0.0673520530145875,0.215166616178029,0.332660356546013,0,0,0,0,2.34640942403454,1.58913877437726,0.406896178315738,1.99727032255654,0.201273793591026,0 | |||
|short_description=p13@LMO3 | |||
}} |
Revision as of 22:00, 10 September 2013
Short description: | p13@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_LMO3_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENST00000536172_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | Q05D86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 4.72e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.