FFCP PHASE1:Hg19::chr15:65184518..65184539,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C6|description=CAGE_peak_at_chr15:65184518..65184539,+|id=chr15:65184518..65184539,+|ontology_enrichment_celltype=CL:0002057!2.16e-31!42;CL:0000860!1.84e-28!45;CL:0000766!1.89e-22!76;CL:0000738!5.20e-21!140;CL:0000839!1.36e-19!70;CL:0000557!3.88e-19!71;CL:0002087!3.36e-18!119;CL:0002194!6.53e-18!63;CL:0000576!6.53e-18!63;CL:0000040!6.53e-18!63;CL:0000559!6.53e-18!63;CL:0002031!1.60e-17!124;CL:0002009!5.17e-17!65;CL:0000037!2.66e-16!172;CL:0000566!2.66e-16!172;CL:0000988!1.09e-15!182;CL:0002032!2.47e-15!165;CL:0000837!2.47e-15!165;CL:0000763!1.36e-14!112;CL:0000049!1.36e-14!112;CL:0002393!8.27e-13!9;CL:0002397!8.27e-13!9|ontology_enrichment_celltype_v019=CL:0000623;2.29e-24;3!CL:0002393;5.41e-13;6!CL:0002397;5.41e-13;6!CL:0000775;4.11e-12;3!CL:0000576;1.75e-10;48!CL:0000473;4.77e-10;39!CL:0000234;4.77e-10;39!CL:0000860;9.79e-10;33!CL:0002057;9.79e-10;33!CL:0000766;1.55e-09;69!CL:0000738;2.52e-07;136|ontology_enrichment_celltype_v019_2=CL:0000623,1.12e-24,3;CL:0000825,1.12e-24,3;CL:0000473,2.59e-18,48;CL:0000234,2.59e-18,48;CL:0000860,2.15e-17,42;CL:0002057,2.15e-17,42;CL:0000766,2.54e-16,72;CL:0002194,2.75e-14,59;CL:0000576,2.75e-14,59;CL:0000040,2.75e-14,59;CL:0000559,2.75e-14,59;CL:0000738,6.78e-14,136;CL:0002009,9.11e-14,61;CL:0002087,8.41e-13,115;CL:0000839,1.33e-12,66;CL:0000557,2.17e-12,67;CL:0000775,3.90e-12,3;CL:0000037,1.11e-10,168;CL:0002031,1.92e-10,120;CL:0000763,3.59e-10,108;CL:0000049,3.59e-10,108;CL:0000988,5.54e-10,177;CL:0002032,8.27e-10,161;CL:0000837,8.27e-10,161;CL:0002393,6.25e-09,9;CL:0002397,6.25e-09,9|ontology_enrichment_development_v019=CL:0002057;1.30e-13;42!UBERON:0010115;2.76e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.37e-15!80;UBERON:0001474!1.85e-14!86;UBERON:0002390!1.22e-13!102;UBERON:0003061!1.22e-13!102;UBERON:0002193!5.78e-12!112;UBERON:0004765!5.89e-12!101;UBERON:0001434!5.89e-12!101;UBERON:0002405!8.17e-10!115;UBERON:0001049!3.01e-09!57;UBERON:0005068!3.01e-09!57;UBERON:0006241!3.01e-09!57;UBERON:0007135!3.01e-09!57;UBERON:0002616!9.91e-08!59;UBERON:0003075!9.31e-07!86;UBERON:0007284!9.31e-07!86;UBERON:0002298!9.49e-07!8|ontology_enrichment_uberon_v019=UBERON:0002363;2.76e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.95e-11,76;UBERON:0001474,8.05e-10,82;UBERON:0002390,1.49e-09,98;UBERON:0003061,1.49e-09,98;UBERON:0002363,3.53e-09,1;UBERON:0007645,3.53e-09,1;UBERON:0007647,3.53e-09,1;UBERON:0010115,3.53e-09,1;UBERON:0004765,8.50e-09,90;UBERON:0003076,1.15e-08,15;UBERON:0003057,1.15e-08,15;UBERON:0002193,1.73e-08,108;UBERON:0002405,1.85e-08,93;UBERON:0001434,9.55e-08,100|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.0821005894499457,0.157421562627358,0,0,0.309632246632152,0,0,0,0,0.142169232487422,0,0.553995408531877,18.0490002723128,9.54847831149748,0,0,0,1.01778767145695,0.377875943688809,0.242584061187816,0.929716147622738,0.822335776043652,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,1.29096936716765,0,1.88242339542605,0.545812300115692,0.224723484445085,0.612167784741805,0,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0,0,1.25624332628372,1.0429658368404,0,0.605399502633369,0.368277635987565,0,0.845021145247767,1.91343869968539,0.838634582033504,1.46027220490444,0.300353785683013,1.12507910687956,0.285012743741249,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0.786021525498329,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44024217006613,0.207328115540772,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.224170287987055,1.57624608161542,1.2937654491571,1.54011643535698,0,0,0,0,0,7.49007023947182,2.99161459204025,0.828831026872071,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,1.50999940573032,0.426910231213777,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr15:65184518..65184539,+ | |||
|id=chr15:65184518..65184539,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.16e-31!42;CL:0000860!1.84e-28!45;CL:0000766!1.89e-22!76;CL:0000738!5.20e-21!140;CL:0000839!1.36e-19!70;CL:0000557!3.88e-19!71;CL:0002087!3.36e-18!119;CL:0002194!6.53e-18!63;CL:0000576!6.53e-18!63;CL:0000040!6.53e-18!63;CL:0000559!6.53e-18!63;CL:0002031!1.60e-17!124;CL:0002009!5.17e-17!65;CL:0000037!2.66e-16!172;CL:0000566!2.66e-16!172;CL:0000988!1.09e-15!182;CL:0002032!2.47e-15!165;CL:0000837!2.47e-15!165;CL:0000763!1.36e-14!112;CL:0000049!1.36e-14!112;CL:0002393!8.27e-13!9;CL:0002397!8.27e-13!9 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.29e-24;3!CL:0002393;5.41e-13;6!CL:0002397;5.41e-13;6!CL:0000775;4.11e-12;3!CL:0000576;1.75e-10;48!CL:0000473;4.77e-10;39!CL:0000234;4.77e-10;39!CL:0000860;9.79e-10;33!CL:0002057;9.79e-10;33!CL:0000766;1.55e-09;69!CL:0000738;2.52e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.12e-24,3;CL:0000825,1.12e-24,3;CL:0000473,2.59e-18,48;CL:0000234,2.59e-18,48;CL:0000860,2.15e-17,42;CL:0002057,2.15e-17,42;CL:0000766,2.54e-16,72;CL:0002194,2.75e-14,59;CL:0000576,2.75e-14,59;CL:0000040,2.75e-14,59;CL:0000559,2.75e-14,59;CL:0000738,6.78e-14,136;CL:0002009,9.11e-14,61;CL:0002087,8.41e-13,115;CL:0000839,1.33e-12,66;CL:0000557,2.17e-12,67;CL:0000775,3.90e-12,3;CL:0000037,1.11e-10,168;CL:0002031,1.92e-10,120;CL:0000763,3.59e-10,108;CL:0000049,3.59e-10,108;CL:0000988,5.54e-10,177;CL:0002032,8.27e-10,161;CL:0000837,8.27e-10,161;CL:0002393,6.25e-09,9;CL:0002397,6.25e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-13;42!UBERON:0010115;2.76e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.37e-15!80;UBERON:0001474!1.85e-14!86;UBERON:0002390!1.22e-13!102;UBERON:0003061!1.22e-13!102;UBERON:0002193!5.78e-12!112;UBERON:0004765!5.89e-12!101;UBERON:0001434!5.89e-12!101;UBERON:0002405!8.17e-10!115;UBERON:0001049!3.01e-09!57;UBERON:0005068!3.01e-09!57;UBERON:0006241!3.01e-09!57;UBERON:0007135!3.01e-09!57;UBERON:0002616!9.91e-08!59;UBERON:0003075!9.31e-07!86;UBERON:0007284!9.31e-07!86;UBERON:0002298!9.49e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.76e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.95e-11,76;UBERON:0001474,8.05e-10,82;UBERON:0002390,1.49e-09,98;UBERON:0003061,1.49e-09,98;UBERON:0002363,3.53e-09,1;UBERON:0007645,3.53e-09,1;UBERON:0007647,3.53e-09,1;UBERON:0010115,3.53e-09,1;UBERON:0004765,8.50e-09,90;UBERON:0003076,1.15e-08,15;UBERON:0003057,1.15e-08,15;UBERON:0002193,1.73e-08,108;UBERON:0002405,1.85e-08,93;UBERON:0001434,9.55e-08,100 | |||
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|short_description=p@chr15:65184518..65184539,+ | |||
}} |
Revision as of 07:51, 11 September 2013
Short description: | p@chr15:65184518..65184539, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:65184518..65184539, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.12e-24 | 3 |
pro-NK cell | 1.12e-24 | 3 |
defensive cell | 2.59e-18 | 48 |
phagocyte | 2.59e-18 | 48 |
classical monocyte | 2.15e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.15e-17 | 42 |
myeloid leukocyte | 2.54e-16 | 72 |
monopoietic cell | 2.75e-14 | 59 |
monocyte | 2.75e-14 | 59 |
monoblast | 2.75e-14 | 59 |
promonocyte | 2.75e-14 | 59 |
leukocyte | 6.78e-14 | 136 |
macrophage dendritic cell progenitor | 9.11e-14 | 61 |
nongranular leukocyte | 8.41e-13 | 115 |
myeloid lineage restricted progenitor cell | 1.33e-12 | 66 |
granulocyte monocyte progenitor cell | 2.17e-12 | 67 |
neutrophil | 3.90e-12 | 3 |
hematopoietic stem cell | 1.11e-10 | 168 |
hematopoietic lineage restricted progenitor cell | 1.92e-10 | 120 |
myeloid cell | 3.59e-10 | 108 |
common myeloid progenitor | 3.59e-10 | 108 |
hematopoietic cell | 5.54e-10 | 177 |
hematopoietic oligopotent progenitor cell | 8.27e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.27e-10 | 161 |
intermediate monocyte | 6.25e-09 | 9 |
CD14-positive, CD16-positive monocyte | 6.25e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.95e-11 | 76 |
bone element | 8.05e-10 | 82 |
hematopoietic system | 1.49e-09 | 98 |
blood island | 1.49e-09 | 98 |
dura mater | 3.53e-09 | 1 |
future meninx | 3.53e-09 | 1 |
ectomeninx | 3.53e-09 | 1 |
future dura mater | 3.53e-09 | 1 |
skeletal element | 8.50e-09 | 90 |
posterior neural tube | 1.15e-08 | 15 |
chordal neural plate | 1.15e-08 | 15 |
hemolymphoid system | 1.73e-08 | 108 |
immune system | 1.85e-08 | 93 |
skeletal system | 9.55e-08 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.