FFCP PHASE1:Hg19::chr15:86087074..86087082,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11214|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=371|TSSclassifier=N|UniProt=|association_with_transcript=-188bp_to_ENST00000558166_5end|coexpression_cluster_id=C344|description=CAGE_peak_48_at_AKAP13_5end|id=chr15:86087074..86087082,+|ontology_enrichment_celltype=CL:0002057!1.08e-36!42;CL:0000860!2.00e-33!45;CL:0000766!1.48e-28!76;CL:0002194!1.91e-24!63;CL:0000576!1.91e-24!63;CL:0000040!1.91e-24!63;CL:0000559!1.91e-24!63;CL:0002009!2.52e-23!65;CL:0000839!4.94e-22!70;CL:0000557!1.50e-21!71;CL:0000763!9.59e-17!112;CL:0000049!9.59e-17!112;CL:0000738!2.73e-14!140;CL:0002087!9.71e-12!119;CL:0000037!3.21e-10!172;CL:0000566!3.21e-10!172;CL:0000988!3.54e-10!182;CL:0002031!1.93e-09!124;CL:0002032!7.52e-09!165;CL:0000837!7.52e-09!165;CL:0000094!2.55e-07!8;CL:0002393!3.04e-07!9;CL:0002397!3.04e-07!9|ontology_enrichment_celltype_v019=CL:0000860;2.56e-44;33!CL:0002057;2.56e-44;33!CL:0000473;6.02e-38;39!CL:0000234;6.02e-38;39!CL:0000576;7.96e-21;48!CL:0000766;1.94e-16;69!CL:0000775;3.27e-11;3!CL:0000763;4.25e-11;100!CL:0000094;3.46e-09;8!CL:0000081;8.45e-07;11|ontology_enrichment_celltype_v019_2=CL:0000860,3.00e-37,42;CL:0002057,3.00e-37,42;CL:0000473,9.50e-37,48;CL:0000234,9.50e-37,48;CL:0000766,1.54e-33,72;CL:0002194,8.31e-29,59;CL:0000576,8.31e-29,59;CL:0000040,8.31e-29,59;CL:0000559,8.31e-29,59;CL:0002009,8.81e-28,61;CL:0000839,1.74e-25,66;CL:0000557,4.57e-25,67;CL:0000763,2.65e-21,108;CL:0000049,2.65e-21,108;CL:0000738,3.18e-16,136;CL:0002087,1.90e-13,115;CL:0002032,3.61e-13,161;CL:0000837,3.61e-13,161;CL:0000988,4.09e-13,177;CL:0002031,9.12e-13,120;CL:0000037,1.79e-12,168;CL:0000775,2.81e-11,3;CL:0000094,3.10e-09,8;CL:0000081,7.81e-07,11|ontology_enrichment_development_v019=CL:0002057;5.55e-29;42!CL:0000049;2.70e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.52e-25!102;UBERON:0003061!2.52e-25!102;UBERON:0002193!6.73e-23!112;UBERON:0002371!8.77e-18!80;UBERON:0001474!9.90e-16!86;UBERON:0007023!7.74e-13!115;UBERON:0002405!6.65e-12!115;UBERON:0004765!9.77e-12!101;UBERON:0001434!9.77e-12!101;UBERON:0000178!1.52e-08!15;UBERON:0000179!1.52e-08!15;UBERON:0000463!1.52e-08!15;UBERON:0003081!9.07e-08!216|ontology_enrichment_uberon_v019=UBERON:0000178;4.73e-12;15!UBERON:0000179;4.73e-12;15!UBERON:0000463;4.73e-12;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.95e-29,98;UBERON:0003061,2.95e-29,98;UBERON:0002193,3.15e-26,108;UBERON:0002371,8.71e-22,76;UBERON:0001474,5.40e-20,82;UBERON:0004765,5.69e-18,90;UBERON:0002405,2.66e-17,93;UBERON:0001434,6.81e-16,100;UBERON:0003081,1.20e-13,203;UBERON:0000178,4.97e-12,15;UBERON:0000179,4.97e-12,15;UBERON:0000463,4.97e-12,15;UBERON:0002204,2.37e-08,167;UBERON:0000926,2.25e-07,315;UBERON:0004120,2.25e-07,315;UBERON:0006603,2.25e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.434021741431704,0,0,0.257575567634187,0.726991193897824,0.755751887377619,0.485168122375632,0.697287110717054,0,0.309706370895104,5.17846306179871,1.5369642391746,5.20260905754887,2.06847408441971,0,1.35426486594342,0.188242339542605,0.818718450173537,0.674170453335254,0,0,1.91801137739712,3.62836430205388,3.39088217956774,4.68847225585964,0.290209238628584,0,0,5.27622197039161,2.60741459210101,4.99534342821768,1.81619850790011,0.368277635987565,0.316462387440884,0.633765858935825,0.212604299965044,0,1.23561494261145,0.750884464207532,2.25015821375912,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,2.99602809578873,0,8.70272578215674,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,1.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=371 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-188bp_to_ENST00000558166_5end | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_48_at_AKAP13_5end | |||
|id=chr15:86087074..86087082,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.08e-36!42;CL:0000860!2.00e-33!45;CL:0000766!1.48e-28!76;CL:0002194!1.91e-24!63;CL:0000576!1.91e-24!63;CL:0000040!1.91e-24!63;CL:0000559!1.91e-24!63;CL:0002009!2.52e-23!65;CL:0000839!4.94e-22!70;CL:0000557!1.50e-21!71;CL:0000763!9.59e-17!112;CL:0000049!9.59e-17!112;CL:0000738!2.73e-14!140;CL:0002087!9.71e-12!119;CL:0000037!3.21e-10!172;CL:0000566!3.21e-10!172;CL:0000988!3.54e-10!182;CL:0002031!1.93e-09!124;CL:0002032!7.52e-09!165;CL:0000837!7.52e-09!165;CL:0000094!2.55e-07!8;CL:0002393!3.04e-07!9;CL:0002397!3.04e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.56e-44;33!CL:0002057;2.56e-44;33!CL:0000473;6.02e-38;39!CL:0000234;6.02e-38;39!CL:0000576;7.96e-21;48!CL:0000766;1.94e-16;69!CL:0000775;3.27e-11;3!CL:0000763;4.25e-11;100!CL:0000094;3.46e-09;8!CL:0000081;8.45e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.00e-37,42;CL:0002057,3.00e-37,42;CL:0000473,9.50e-37,48;CL:0000234,9.50e-37,48;CL:0000766,1.54e-33,72;CL:0002194,8.31e-29,59;CL:0000576,8.31e-29,59;CL:0000040,8.31e-29,59;CL:0000559,8.31e-29,59;CL:0002009,8.81e-28,61;CL:0000839,1.74e-25,66;CL:0000557,4.57e-25,67;CL:0000763,2.65e-21,108;CL:0000049,2.65e-21,108;CL:0000738,3.18e-16,136;CL:0002087,1.90e-13,115;CL:0002032,3.61e-13,161;CL:0000837,3.61e-13,161;CL:0000988,4.09e-13,177;CL:0002031,9.12e-13,120;CL:0000037,1.79e-12,168;CL:0000775,2.81e-11,3;CL:0000094,3.10e-09,8;CL:0000081,7.81e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.55e-29;42!CL:0000049;2.70e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.52e-25!102;UBERON:0003061!2.52e-25!102;UBERON:0002193!6.73e-23!112;UBERON:0002371!8.77e-18!80;UBERON:0001474!9.90e-16!86;UBERON:0007023!7.74e-13!115;UBERON:0002405!6.65e-12!115;UBERON:0004765!9.77e-12!101;UBERON:0001434!9.77e-12!101;UBERON:0000178!1.52e-08!15;UBERON:0000179!1.52e-08!15;UBERON:0000463!1.52e-08!15;UBERON:0003081!9.07e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.73e-12;15!UBERON:0000179;4.73e-12;15!UBERON:0000463;4.73e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.95e-29,98;UBERON:0003061,2.95e-29,98;UBERON:0002193,3.15e-26,108;UBERON:0002371,8.71e-22,76;UBERON:0001474,5.40e-20,82;UBERON:0004765,5.69e-18,90;UBERON:0002405,2.66e-17,93;UBERON:0001434,6.81e-16,100;UBERON:0003081,1.20e-13,203;UBERON:0000178,4.97e-12,15;UBERON:0000179,4.97e-12,15;UBERON:0000463,4.97e-12,15;UBERON:0002204,2.37e-08,167;UBERON:0000926,2.25e-07,315;UBERON:0004120,2.25e-07,315;UBERON:0006603,2.25e-07,315 | |||
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|short_description=p48@AKAP13 | |||
}} |
Revision as of 08:39, 11 September 2013
Short description: | p48@AKAP13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_48_at_AKAP13_5end |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | -188bp_to_ENST00000558166_5end |
EntrezGene: | AKAP13 |
HGNC: | 371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.00e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.00e-37 | 42 |
defensive cell | 9.50e-37 | 48 |
phagocyte | 9.50e-37 | 48 |
myeloid leukocyte | 1.54e-33 | 72 |
monopoietic cell | 8.31e-29 | 59 |
monocyte | 8.31e-29 | 59 |
monoblast | 8.31e-29 | 59 |
promonocyte | 8.31e-29 | 59 |
macrophage dendritic cell progenitor | 8.81e-28 | 61 |
myeloid lineage restricted progenitor cell | 1.74e-25 | 66 |
granulocyte monocyte progenitor cell | 4.57e-25 | 67 |
myeloid cell | 2.65e-21 | 108 |
common myeloid progenitor | 2.65e-21 | 108 |
leukocyte | 3.18e-16 | 136 |
nongranular leukocyte | 1.90e-13 | 115 |
hematopoietic oligopotent progenitor cell | 3.61e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.61e-13 | 161 |
hematopoietic cell | 4.09e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 9.12e-13 | 120 |
hematopoietic stem cell | 1.79e-12 | 168 |
neutrophil | 2.81e-11 | 3 |
granulocyte | 3.10e-09 | 8 |
blood cell | 7.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.95e-29 | 98 |
blood island | 2.95e-29 | 98 |
hemolymphoid system | 3.15e-26 | 108 |
bone marrow | 8.71e-22 | 76 |
bone element | 5.40e-20 | 82 |
skeletal element | 5.69e-18 | 90 |
immune system | 2.66e-17 | 93 |
skeletal system | 6.81e-16 | 100 |
lateral plate mesoderm | 1.20e-13 | 203 |
blood | 4.97e-12 | 15 |
haemolymphatic fluid | 4.97e-12 | 15 |
organism substance | 4.97e-12 | 15 |
musculoskeletal system | 2.37e-08 | 167 |
mesoderm | 2.25e-07 | 315 |
mesoderm-derived structure | 2.25e-07 | 315 |
presumptive mesoderm | 2.25e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.