FFCP PHASE1:Hg19::chr15:90334271..90334330,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C403|description=CAGE_peak_at_chr15:90334271..90334330,-|id=chr15:90334271..90334330,-|ontology_enrichment_celltype=CL:0000048!7.95e-31!430;CL:0000723!3.59e-29!436;CL:0000034!1.80e-28!444;CL:0002371!2.15e-22!591;CL:0000055!9.33e-20!180;CL:0002320!5.49e-19!365;CL:0000134!1.63e-17!358;CL:0000144!4.13e-17!625;CL:0000057!6.22e-16!75;CL:0002057!9.78e-15!42;CL:0000680!1.16e-14!57;CL:0000056!1.16e-14!57;CL:0000355!1.16e-14!57;CL:0000183!1.39e-13!59;CL:0000219!2.05e-13!390;CL:0000187!5.31e-13!54;CL:0000860!1.03e-12!45;CL:0000766!9.34e-12!76;CL:0002194!2.01e-11!63;CL:0000576!2.01e-11!63;CL:0000040!2.01e-11!63;CL:0000559!2.01e-11!63;CL:0002009!4.79e-11!65;CL:0000192!3.63e-10!42;CL:0000514!3.63e-10!42;CL:0000393!4.61e-10!60;CL:0000211!4.61e-10!60;CL:0000012!8.39e-10!682;CL:0000557!1.24e-09!71;CL:0000548!1.35e-09!679;CL:0000004!1.35e-09!679;CL:0000255!1.35e-09!679;CL:0000839!1.47e-09!70;CL:0002620!1.55e-09!23;CL:0000222!4.17e-09!119;CL:0000359!3.37e-08!32|ontology_enrichment_celltype_v019=CL:0000860;8.21e-21;33!CL:0002057;8.21e-21;33!CL:0000473;3.50e-14;39!CL:0000234;3.50e-14;39!CL:0000576;1.97e-09;48!CL:0002620;2.29e-07;23!CL:0002539;6.21e-07;10|ontology_enrichment_celltype_v019_2=CL:0000048,2.02e-18,427;CL:0000723,1.18e-17,433;CL:0000860,3.74e-17,42;CL:0002057,3.74e-17,42;CL:0000034,1.14e-16,441;CL:0000473,2.61e-15,48;CL:0000234,2.61e-15,48;CL:0002194,2.25e-12,59;CL:0000576,2.25e-12,59;CL:0000040,2.25e-12,59;CL:0000559,2.25e-12,59;CL:0000766,4.82e-12,72;CL:0002320,1.07e-11,361;CL:0002009,1.15e-11,61;CL:0000134,3.81e-11,354;CL:0000839,4.24e-10,66;CL:0000557,8.12e-10,67;CL:0000680,7.55e-09,58;CL:0000056,7.55e-09,58;CL:0000355,7.55e-09,58;CL:0000219,2.88e-08,386;CL:0000057,1.34e-07,76;CL:0002620,2.52e-07,23;CL:0002539,3.94e-07,10;CL:0000187,4.75e-07,55|ontology_enrichment_development_v019=CL:0002057;3.14e-13;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.07e-24!167;UBERON:0002384!2.72e-18!375;UBERON:0000926!1.76e-16!448;UBERON:0004120!1.76e-16!448;UBERON:0006603!1.76e-16!448;UBERON:0000914!1.19e-15!83;UBERON:0002329!1.19e-15!83;UBERON:0003077!1.19e-15!83;UBERON:0003059!1.19e-15!83;UBERON:0007282!1.19e-15!83;UBERON:0009618!1.19e-15!83;UBERON:0007285!1.19e-15!83;UBERON:0004290!1.93e-15!70;UBERON:0003081!2.08e-14!216;UBERON:0002385!3.54e-13!63;UBERON:0001015!3.54e-13!63;UBERON:0000383!3.54e-13!63;UBERON:0005256!7.07e-13!143;UBERON:0001134!1.71e-12!61;UBERON:0002036!1.71e-12!61;UBERON:0003082!1.71e-12!61;UBERON:0000486!7.90e-12!82;UBERON:0002405!1.41e-11!115;UBERON:0002371!1.82e-11!80;UBERON:0004765!2.21e-10!101;UBERON:0001434!2.21e-10!101;UBERON:0001474!6.07e-10!86;UBERON:0002193!9.35e-09!112;UBERON:0002390!1.01e-08!102;UBERON:0003061!1.01e-08!102;UBERON:0003914!1.07e-08!118;UBERON:0004535!1.82e-08!110;UBERON:0002049!2.44e-08!79;UBERON:0007798!2.44e-08!79;UBERON:0000479!2.63e-08!787;UBERON:0001981!3.19e-08!60;UBERON:0007500!3.19e-08!60;UBERON:0004537!3.19e-08!60;UBERON:0006965!3.19e-08!60;UBERON:0000490!3.76e-08!138;UBERON:0000055!5.08e-08!69;UBERON:0004573!5.50e-08!33;UBERON:0004571!5.50e-08!33;UBERON:0002100!8.20e-08!216;UBERON:0001637!1.00e-07!42;UBERON:0003509!1.00e-07!42;UBERON:0004572!1.00e-07!42;UBERON:0001009!1.02e-07!113;UBERON:0001135!2.08e-07!15;UBERON:0000468!3.83e-07!659;UBERON:0004872!5.23e-07!84;UBERON:0000467!5.28e-07!625;UBERON:0002199!5.93e-07!45;UBERON:0002416!5.93e-07!45;UBERON:0000480!6.97e-07!626|ontology_enrichment_uberon_v019=UBERON:0004237;6.21e-07;10!UBERON:0004695;6.21e-07;10!UBERON:0002111;6.21e-07;10!UBERON:0004178;6.21e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.85e-17,167;UBERON:0000926,3.60e-13,315;UBERON:0004120,3.60e-13,315;UBERON:0006603,3.60e-13,315;UBERON:0002371,5.91e-13,76;UBERON:0001474,6.93e-12,82;UBERON:0002384,1.18e-11,371;UBERON:0007524,2.99e-11,73;UBERON:0002329,3.95e-11,71;UBERON:0003059,3.95e-11,71;UBERON:0007282,3.95e-11,71;UBERON:0004290,3.95e-11,71;UBERON:0009618,3.95e-11,71;UBERON:0002390,6.47e-11,98;UBERON:0003061,6.47e-11,98;UBERON:0003081,7.26e-11,203;UBERON:0003077,7.77e-11,72;UBERON:0007285,7.77e-11,72;UBERON:0004765,1.69e-10,90;UBERON:0002193,2.47e-10,108;UBERON:0002405,3.16e-10,93;UBERON:0007503,2.96e-09,78;UBERON:0001434,2.19e-08,100;UBERON:0002385,3.21e-08,64;UBERON:0001015,3.21e-08,64;UBERON:0000383,3.21e-08,64;UBERON:0000486,3.88e-08,83;UBERON:0001134,8.62e-08,62;UBERON:0002036,8.62e-08,62;UBERON:0003082,8.62e-08,62;UBERON:0005256,2.27e-07,122;UBERON:0002199,2.33e-07,46;UBERON:0002416,2.33e-07,46;UBERON:0004237,3.94e-07,10;UBERON:0004695,3.94e-07,10;UBERON:0002111,3.94e-07,10;UBERON:0004178,3.94e-07,10;UBERON:0004573,4.04e-07,33;UBERON:0004571,4.04e-07,33|phase1_expression=2.54349730978779,1.71280419112787,0.986680828671798,2.00146596706261,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C403 | |||
|description=CAGE_peak_at_chr15:90334271..90334330,- | |||
|id=chr15:90334271..90334330,- | |||
|ontology_enrichment_celltype=CL:0000048!7.95e-31!430;CL:0000723!3.59e-29!436;CL:0000034!1.80e-28!444;CL:0002371!2.15e-22!591;CL:0000055!9.33e-20!180;CL:0002320!5.49e-19!365;CL:0000134!1.63e-17!358;CL:0000144!4.13e-17!625;CL:0000057!6.22e-16!75;CL:0002057!9.78e-15!42;CL:0000680!1.16e-14!57;CL:0000056!1.16e-14!57;CL:0000355!1.16e-14!57;CL:0000183!1.39e-13!59;CL:0000219!2.05e-13!390;CL:0000187!5.31e-13!54;CL:0000860!1.03e-12!45;CL:0000766!9.34e-12!76;CL:0002194!2.01e-11!63;CL:0000576!2.01e-11!63;CL:0000040!2.01e-11!63;CL:0000559!2.01e-11!63;CL:0002009!4.79e-11!65;CL:0000192!3.63e-10!42;CL:0000514!3.63e-10!42;CL:0000393!4.61e-10!60;CL:0000211!4.61e-10!60;CL:0000012!8.39e-10!682;CL:0000557!1.24e-09!71;CL:0000548!1.35e-09!679;CL:0000004!1.35e-09!679;CL:0000255!1.35e-09!679;CL:0000839!1.47e-09!70;CL:0002620!1.55e-09!23;CL:0000222!4.17e-09!119;CL:0000359!3.37e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.21e-21;33!CL:0002057;8.21e-21;33!CL:0000473;3.50e-14;39!CL:0000234;3.50e-14;39!CL:0000576;1.97e-09;48!CL:0002620;2.29e-07;23!CL:0002539;6.21e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.02e-18,427;CL:0000723,1.18e-17,433;CL:0000860,3.74e-17,42;CL:0002057,3.74e-17,42;CL:0000034,1.14e-16,441;CL:0000473,2.61e-15,48;CL:0000234,2.61e-15,48;CL:0002194,2.25e-12,59;CL:0000576,2.25e-12,59;CL:0000040,2.25e-12,59;CL:0000559,2.25e-12,59;CL:0000766,4.82e-12,72;CL:0002320,1.07e-11,361;CL:0002009,1.15e-11,61;CL:0000134,3.81e-11,354;CL:0000839,4.24e-10,66;CL:0000557,8.12e-10,67;CL:0000680,7.55e-09,58;CL:0000056,7.55e-09,58;CL:0000355,7.55e-09,58;CL:0000219,2.88e-08,386;CL:0000057,1.34e-07,76;CL:0002620,2.52e-07,23;CL:0002539,3.94e-07,10;CL:0000187,4.75e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;3.14e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.07e-24!167;UBERON:0002384!2.72e-18!375;UBERON:0000926!1.76e-16!448;UBERON:0004120!1.76e-16!448;UBERON:0006603!1.76e-16!448;UBERON:0000914!1.19e-15!83;UBERON:0002329!1.19e-15!83;UBERON:0003077!1.19e-15!83;UBERON:0003059!1.19e-15!83;UBERON:0007282!1.19e-15!83;UBERON:0009618!1.19e-15!83;UBERON:0007285!1.19e-15!83;UBERON:0004290!1.93e-15!70;UBERON:0003081!2.08e-14!216;UBERON:0002385!3.54e-13!63;UBERON:0001015!3.54e-13!63;UBERON:0000383!3.54e-13!63;UBERON:0005256!7.07e-13!143;UBERON:0001134!1.71e-12!61;UBERON:0002036!1.71e-12!61;UBERON:0003082!1.71e-12!61;UBERON:0000486!7.90e-12!82;UBERON:0002405!1.41e-11!115;UBERON:0002371!1.82e-11!80;UBERON:0004765!2.21e-10!101;UBERON:0001434!2.21e-10!101;UBERON:0001474!6.07e-10!86;UBERON:0002193!9.35e-09!112;UBERON:0002390!1.01e-08!102;UBERON:0003061!1.01e-08!102;UBERON:0003914!1.07e-08!118;UBERON:0004535!1.82e-08!110;UBERON:0002049!2.44e-08!79;UBERON:0007798!2.44e-08!79;UBERON:0000479!2.63e-08!787;UBERON:0001981!3.19e-08!60;UBERON:0007500!3.19e-08!60;UBERON:0004537!3.19e-08!60;UBERON:0006965!3.19e-08!60;UBERON:0000490!3.76e-08!138;UBERON:0000055!5.08e-08!69;UBERON:0004573!5.50e-08!33;UBERON:0004571!5.50e-08!33;UBERON:0002100!8.20e-08!216;UBERON:0001637!1.00e-07!42;UBERON:0003509!1.00e-07!42;UBERON:0004572!1.00e-07!42;UBERON:0001009!1.02e-07!113;UBERON:0001135!2.08e-07!15;UBERON:0000468!3.83e-07!659;UBERON:0004872!5.23e-07!84;UBERON:0000467!5.28e-07!625;UBERON:0002199!5.93e-07!45;UBERON:0002416!5.93e-07!45;UBERON:0000480!6.97e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;6.21e-07;10!UBERON:0004695;6.21e-07;10!UBERON:0002111;6.21e-07;10!UBERON:0004178;6.21e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.85e-17,167;UBERON:0000926,3.60e-13,315;UBERON:0004120,3.60e-13,315;UBERON:0006603,3.60e-13,315;UBERON:0002371,5.91e-13,76;UBERON:0001474,6.93e-12,82;UBERON:0002384,1.18e-11,371;UBERON:0007524,2.99e-11,73;UBERON:0002329,3.95e-11,71;UBERON:0003059,3.95e-11,71;UBERON:0007282,3.95e-11,71;UBERON:0004290,3.95e-11,71;UBERON:0009618,3.95e-11,71;UBERON:0002390,6.47e-11,98;UBERON:0003061,6.47e-11,98;UBERON:0003081,7.26e-11,203;UBERON:0003077,7.77e-11,72;UBERON:0007285,7.77e-11,72;UBERON:0004765,1.69e-10,90;UBERON:0002193,2.47e-10,108;UBERON:0002405,3.16e-10,93;UBERON:0007503,2.96e-09,78;UBERON:0001434,2.19e-08,100;UBERON:0002385,3.21e-08,64;UBERON:0001015,3.21e-08,64;UBERON:0000383,3.21e-08,64;UBERON:0000486,3.88e-08,83;UBERON:0001134,8.62e-08,62;UBERON:0002036,8.62e-08,62;UBERON:0003082,8.62e-08,62;UBERON:0005256,2.27e-07,122;UBERON:0002199,2.33e-07,46;UBERON:0002416,2.33e-07,46;UBERON:0004237,3.94e-07,10;UBERON:0004695,3.94e-07,10;UBERON:0002111,3.94e-07,10;UBERON:0004178,3.94e-07,10;UBERON:0004573,4.04e-07,33;UBERON:0004571,4.04e-07,33 | |||
|phase1_expression=2.54349730978779,1.71280419112787,0.986680828671798,2.00146596706261,0.893922188854576,0,0,1.26343974685366,0.522371256399677,0,0,0.436882744260345,0.527533956456907,1.23766352960047,0.994192127183747,2.6893005858071,1.80808358407193,2.19093027116212,1.46379839637152,0.61560529038394,1.22400414746552,0,0,0.547497700291537,0.251085279189606,0,0,0,0.393364276848904,0,0.928896739896456,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0.447830948479849,0,0,3.92575244704825,1.13362783106643,2.66842467306598,3.95129362739664,0.822335776043652,1.85823822537062,4.02769349251011,5.37937483711111,4.02019790810595,2.41321976515633,0.645484683583826,0,7.52969358170419,2.18324920046277,3.37085226667627,5.20342617030534,2.88836124368484,1.27867425159808,3.95821560224059,4.3882004676759,2.13112375266347,5.5139755339431,1.70215567407342,1.24564449799115,5.27622197039161,4.17186334736161,2.17188844705117,2.42159801053347,2.57794345191295,3.16462387440884,0.211255286311942,1.06302149982522,0,0.561643155732475,0.901061357049038,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.255725123687061,0.722878304769133,0.50133791063589,0.289693037921647,0,1.45990461090791,0.0945348171640679,0,0,0.458426764241994,0,0,1.29818957461873,0.870648686496336,4.25465473660369,0,0,0,0.198762407366705,0,1.38856200643038,0.56530794192401,1.25849830862972,0,0.417989933073621,0.775250277507987,0,0,1.20848795132744,0.760272105718513,0.24406205754817,0,0,0.535798369704479,0.22452937262617,0.112611480483322,1.53316637465883,0.949265659568129,1.09921046358244,1.31780417436063,0,0,0,0.506522046658319,0.264818361626438,1.72101972449288,1.41867352879343,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0.908144565869588,1.72852777344,0.468642863667593,1.24864030732128,2.85235910772225,1.64393548606981,0.469737994575059,1.29498355494505,1.40450806702248,3.47062091133319,0.368502951935304,1.03325781175765,0,0.741800787835671,2.73048408581408,4.31170885089743,0.505008341862199,0.500474079487857,0.554128230968366,0,0.30648779579902,0.45071417671979,0.113432183160021,1.61450672119976,1.49490172172997,0.635795703478686,3.60109315301283,1.13357782162283,2.31876486041066,1.30281799432113,3.88185564154912,0.487185025805993,1.26216887122057,0.552299391853796,0.161646056818812,1.77504796258307,0.806016785821122,0.847802961552438,0,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,8.36213219650751,4.14404764057442,3.25057549622385,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,8.87285243752816,2.94848165003288,2.36315962672562,0,0.122988438543114,0,0,0,0,0,0.977424915930974,2.07986957055916,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.984868024349589,0.936017060556951,0.891786973732369,0,0.16798212819886,0,0.179117045405697,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0.87192013766656,0.51336800074665,0,10.7296933755565,5.071816515336,0,0,1.28603687131071,1.41849132023278,1.5985330740966,0.714889968290738,2.71310802695722,0.823240336780769,0.65147236858747,0.710783897485092,0.791951872933429,0,0,0,0,0,8.43335757932127,0,0,0,2.02693829334611,4.52047909610843,2.50685348535854,0,0,0,0,0,0,0,0,0,3.74503511973591,17.9496875522415,2.07207756718018,0.858840442033979,0.500170521059677,0,0.207970861530807,1.78428988797162,0.157702415033935,0.35142424497814,0.601892199455438,2.27407504055985,1.03473071292505,0,0.184369168541703,2.34585759063824,1.37060810223918,1.37257369524342,0,0.215714200818617,0.106727557803444,0,0,0,0.992431231275107,1.07423381301644,1.68396056659844,0.512556597022804,0.511707249066704,0.321707842287215,0,3.39261326365842,3.37367278094941,1.56041596426237,1.55776328755086,4.99704627377825,0,0,0,0.34444334449382,1.45672934405374,0.393373244878272,0,0.15403067420883,0,0,0,0,0.850468526382578,0.647747748306418,0,0.270946437543853,0,1.01950509218015,1.66215201785745,0.895499018888713,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0,1.6068392984416,1.06337790121334,1.3864375540318,0.614014698904518,0.551346289938122,1.93356440762893,2.90033387828457,0.511359764496605,0.267096106940212,0,0,0,0,0.929691098594572,3.77774816196768,2.0911118104818,0.308033580176089,2.66153015158511,2.60979897622522,0.9266210955196,0,0,0.632758849437452,0.190630193923825,0.255897791311334,1.28381696410176,1.90921948755562,0.78494864019923,0.719489830333259,0.54907405947211,0.353437207037059,0.808729926293264,1.58510321173008,1.26377536871694,0.48763373908959,3.1682753652067,2.11300293513511,0.136499911407986,0.707027159768564,1.13008116620243,1.65409603063837,0,1.31535265576129,1.15755106853338,1.31178950409327,0,0.6196469961995,0.845086807596724,0.717056761020258,0.392996164052485,0,1.41904425628239,0.633322905892992,0.658589785919804,0.379473173765715,1.39973888097993,0,0,0,0.659006605437454,0,0,0,0,1.5223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| |||
|short_description=p@chr15:90334271..90334330,- | |||
}} |
Revision as of 08:47, 11 September 2013
Short description: | p@chr15:90334271..90334330, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:90334271..90334330, - |
Coexpression cluster: | C403_small_Neutrophils_temporal_leiomyoma_Hair_colon_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.02e-18 | 427 |
somatic stem cell | 1.18e-17 | 433 |
classical monocyte | 3.74e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.74e-17 | 42 |
stem cell | 1.14e-16 | 441 |
defensive cell | 2.61e-15 | 48 |
phagocyte | 2.61e-15 | 48 |
monopoietic cell | 2.25e-12 | 59 |
monocyte | 2.25e-12 | 59 |
monoblast | 2.25e-12 | 59 |
promonocyte | 2.25e-12 | 59 |
myeloid leukocyte | 4.82e-12 | 72 |
connective tissue cell | 1.07e-11 | 361 |
macrophage dendritic cell progenitor | 1.15e-11 | 61 |
mesenchymal cell | 3.81e-11 | 354 |
myeloid lineage restricted progenitor cell | 4.24e-10 | 66 |
granulocyte monocyte progenitor cell | 8.12e-10 | 67 |
muscle precursor cell | 7.55e-09 | 58 |
myoblast | 7.55e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.55e-09 | 58 |
motile cell | 2.88e-08 | 386 |
fibroblast | 1.34e-07 | 76 |
skin fibroblast | 2.52e-07 | 23 |
aortic smooth muscle cell | 3.94e-07 | 10 |
muscle cell | 4.75e-07 | 55 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.