FFCP PHASE1:Hg19::chr15:90335773..90335792,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C403|description=CAGE_peak_at_chr15:90335773..90335792,-|id=chr15:90335773..90335792,-|ontology_enrichment_celltype=CL:0000048!1.61e-27!430;CL:0000723!2.53e-26!436;CL:0000034!8.73e-25!444;CL:0002057!1.19e-21!42;CL:0000860!2.94e-19!45;CL:0002320!4.96e-19!365;CL:0002194!9.49e-18!63;CL:0000576!9.49e-18!63;CL:0000040!9.49e-18!63;CL:0000559!9.49e-18!63;CL:0000134!1.38e-17!358;CL:0002009!1.02e-16!65;CL:0002371!1.11e-15!591;CL:0000766!1.69e-15!76;CL:0000839!3.21e-15!70;CL:0000055!3.41e-15!180;CL:0000557!8.68e-15!71;CL:0000219!9.50e-15!390;CL:0000057!2.86e-13!75;CL:0000144!6.77e-13!625;CL:0000680!6.03e-10!57;CL:0000056!6.03e-10!57;CL:0000355!6.03e-10!57;CL:0002620!8.08e-10!23;CL:0000763!3.15e-09!112;CL:0000049!3.15e-09!112;CL:0000548!6.00e-09!679;CL:0000004!6.00e-09!679;CL:0000255!6.00e-09!679;CL:0000183!1.20e-08!59;CL:0000012!1.21e-08!682;CL:0000187!3.21e-08!54|ontology_enrichment_celltype_v019=CL:0000860;3.84e-28;33!CL:0002057;3.84e-28;33!CL:0000473;3.03e-21;39!CL:0000234;3.03e-21;39!CL:0000576;6.44e-13;48!CL:0000346;3.25e-10;3!CL:1000428;3.25e-10;3!CL:0002559;3.72e-10;5!CL:0000515;1.56e-09;3!CL:0002570;9.93e-09;8!CL:0000766;7.42e-08;69!CL:0000056;3.06e-07;4!CL:0000680;7.13e-07;7|ontology_enrichment_celltype_v019_2=CL:0000860,1.59e-23,42;CL:0002057,1.59e-23,42;CL:0000473,4.52e-22,48;CL:0000234,4.52e-22,48;CL:0002194,2.47e-18,59;CL:0000576,2.47e-18,59;CL:0000040,2.47e-18,59;CL:0000559,2.47e-18,59;CL:0002009,1.49e-17,61;CL:0000839,8.22e-16,66;CL:0000766,1.07e-15,72;CL:0000557,1.71e-15,67;CL:0000048,1.67e-10,427;CL:0002559,2.24e-10,5;CL:0000346,2.28e-10,3;CL:1000428,2.28e-10,3;CL:0000723,3.59e-10,433;CL:0000034,9.63e-10,441;CL:0002320,6.38e-09,361;CL:0000134,9.93e-09,354;CL:0000763,1.30e-08,108;CL:0000049,1.30e-08,108;CL:0002570,1.44e-08,8;CL:0000515,4.22e-07,4;CL:0000219,5.56e-07,386;CL:0002087,7.22e-07,115|ontology_enrichment_development_v019=CL:0002057;1.10e-18;42!CL:0000515;3.06e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!4.33e-24!167;UBERON:0002384!2.24e-18!375;UBERON:0002371!7.26e-14!80;UBERON:0000926!9.54e-14!448;UBERON:0004120!9.54e-14!448;UBERON:0006603!9.54e-14!448;UBERON:0004290!2.31e-13!70;UBERON:0004765!2.60e-13!101;UBERON:0001434!2.60e-13!101;UBERON:0001474!2.63e-13!86;UBERON:0000914!6.83e-13!83;UBERON:0002329!6.83e-13!83;UBERON:0003077!6.83e-13!83;UBERON:0003059!6.83e-13!83;UBERON:0007282!6.83e-13!83;UBERON:0009618!6.83e-13!83;UBERON:0007285!6.83e-13!83;UBERON:0000486!8.38e-11!82;UBERON:0002390!1.33e-10!102;UBERON:0003061!1.33e-10!102;UBERON:0002193!1.42e-09!112;UBERON:0003081!2.60e-09!216;UBERON:0002405!5.07e-09!115;UBERON:0002385!7.00e-09!63;UBERON:0001015!7.00e-09!63;UBERON:0000383!7.00e-09!63;UBERON:0001134!1.36e-08!61;UBERON:0002036!1.36e-08!61;UBERON:0003082!1.36e-08!61;UBERON:0002067!2.79e-08!9;UBERON:0004016!2.79e-08!9;UBERON:0010083!2.79e-08!9;UBERON:0002199!7.91e-08!45;UBERON:0002416!7.91e-08!45;UBERON:0005256!1.65e-07!143;UBERON:0002097!5.08e-07!40|ontology_enrichment_uberon_v019=UBERON:0000412;3.25e-10;3!UBERON:0001992;3.25e-10;3!UBERON:0002073;3.72e-10;5|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-14,76;UBERON:0001474,5.15e-13,82;UBERON:0002204,1.68e-12,167;UBERON:0004765,1.70e-12,90;UBERON:0002405,4.97e-12,93;UBERON:0001434,1.15e-10,100;UBERON:0002073,2.24e-10,5;UBERON:0005086,2.24e-10,5;UBERON:0000412,2.28e-10,3;UBERON:0001992,2.28e-10,3;UBERON:0002390,5.54e-10,98;UBERON:0003061,5.54e-10,98;UBERON:0002193,1.47e-09,108;UBERON:0002384,5.43e-09,371;UBERON:0000926,1.32e-08,315;UBERON:0004120,1.32e-08,315;UBERON:0006603,1.32e-08,315|phase1_expression=0.908391896352783,0.856402095563933,0.422863212287913,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0,0.246242116153576,0.408001382488506,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0.895661896959697,0,0,3.34415949192999,1.13362783106643,0.970336244751265,2.09186133215116,0.411167888021826,0.929119112685311,3.16461631554365,2.0492856522328,0.47296445977717,1.37898272294647,0,1.35426486594342,5.08254316765033,3.0019676506363,1.12361742222542,1.22433556948361,0.962787081228281,1.27867425159808,0.989553900560148,1.19678194572979,1.27867425159808,1.7412554317715,0.56738522469114,0.622822248995575,3.01498398308092,2.08593167368081,0.434377689410233,3.63239701580021,1.84138817993782,1.26584954976354,0,0.212604299965044,0.209658645508376,0.22465726229299,0.600707571366025,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0.324547393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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C403 | |||
|description=CAGE_peak_at_chr15:90335773..90335792,- | |||
|id=chr15:90335773..90335792,- | |||
|ontology_enrichment_celltype=CL:0000048!1.61e-27!430;CL:0000723!2.53e-26!436;CL:0000034!8.73e-25!444;CL:0002057!1.19e-21!42;CL:0000860!2.94e-19!45;CL:0002320!4.96e-19!365;CL:0002194!9.49e-18!63;CL:0000576!9.49e-18!63;CL:0000040!9.49e-18!63;CL:0000559!9.49e-18!63;CL:0000134!1.38e-17!358;CL:0002009!1.02e-16!65;CL:0002371!1.11e-15!591;CL:0000766!1.69e-15!76;CL:0000839!3.21e-15!70;CL:0000055!3.41e-15!180;CL:0000557!8.68e-15!71;CL:0000219!9.50e-15!390;CL:0000057!2.86e-13!75;CL:0000144!6.77e-13!625;CL:0000680!6.03e-10!57;CL:0000056!6.03e-10!57;CL:0000355!6.03e-10!57;CL:0002620!8.08e-10!23;CL:0000763!3.15e-09!112;CL:0000049!3.15e-09!112;CL:0000548!6.00e-09!679;CL:0000004!6.00e-09!679;CL:0000255!6.00e-09!679;CL:0000183!1.20e-08!59;CL:0000012!1.21e-08!682;CL:0000187!3.21e-08!54 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.84e-28;33!CL:0002057;3.84e-28;33!CL:0000473;3.03e-21;39!CL:0000234;3.03e-21;39!CL:0000576;6.44e-13;48!CL:0000346;3.25e-10;3!CL:1000428;3.25e-10;3!CL:0002559;3.72e-10;5!CL:0000515;1.56e-09;3!CL:0002570;9.93e-09;8!CL:0000766;7.42e-08;69!CL:0000056;3.06e-07;4!CL:0000680;7.13e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.59e-23,42;CL:0002057,1.59e-23,42;CL:0000473,4.52e-22,48;CL:0000234,4.52e-22,48;CL:0002194,2.47e-18,59;CL:0000576,2.47e-18,59;CL:0000040,2.47e-18,59;CL:0000559,2.47e-18,59;CL:0002009,1.49e-17,61;CL:0000839,8.22e-16,66;CL:0000766,1.07e-15,72;CL:0000557,1.71e-15,67;CL:0000048,1.67e-10,427;CL:0002559,2.24e-10,5;CL:0000346,2.28e-10,3;CL:1000428,2.28e-10,3;CL:0000723,3.59e-10,433;CL:0000034,9.63e-10,441;CL:0002320,6.38e-09,361;CL:0000134,9.93e-09,354;CL:0000763,1.30e-08,108;CL:0000049,1.30e-08,108;CL:0002570,1.44e-08,8;CL:0000515,4.22e-07,4;CL:0000219,5.56e-07,386;CL:0002087,7.22e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-18;42!CL:0000515;3.06e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.33e-24!167;UBERON:0002384!2.24e-18!375;UBERON:0002371!7.26e-14!80;UBERON:0000926!9.54e-14!448;UBERON:0004120!9.54e-14!448;UBERON:0006603!9.54e-14!448;UBERON:0004290!2.31e-13!70;UBERON:0004765!2.60e-13!101;UBERON:0001434!2.60e-13!101;UBERON:0001474!2.63e-13!86;UBERON:0000914!6.83e-13!83;UBERON:0002329!6.83e-13!83;UBERON:0003077!6.83e-13!83;UBERON:0003059!6.83e-13!83;UBERON:0007282!6.83e-13!83;UBERON:0009618!6.83e-13!83;UBERON:0007285!6.83e-13!83;UBERON:0000486!8.38e-11!82;UBERON:0002390!1.33e-10!102;UBERON:0003061!1.33e-10!102;UBERON:0002193!1.42e-09!112;UBERON:0003081!2.60e-09!216;UBERON:0002405!5.07e-09!115;UBERON:0002385!7.00e-09!63;UBERON:0001015!7.00e-09!63;UBERON:0000383!7.00e-09!63;UBERON:0001134!1.36e-08!61;UBERON:0002036!1.36e-08!61;UBERON:0003082!1.36e-08!61;UBERON:0002067!2.79e-08!9;UBERON:0004016!2.79e-08!9;UBERON:0010083!2.79e-08!9;UBERON:0002199!7.91e-08!45;UBERON:0002416!7.91e-08!45;UBERON:0005256!1.65e-07!143;UBERON:0002097!5.08e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.25e-10;3!UBERON:0001992;3.25e-10;3!UBERON:0002073;3.72e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-14,76;UBERON:0001474,5.15e-13,82;UBERON:0002204,1.68e-12,167;UBERON:0004765,1.70e-12,90;UBERON:0002405,4.97e-12,93;UBERON:0001434,1.15e-10,100;UBERON:0002073,2.24e-10,5;UBERON:0005086,2.24e-10,5;UBERON:0000412,2.28e-10,3;UBERON:0001992,2.28e-10,3;UBERON:0002390,5.54e-10,98;UBERON:0003061,5.54e-10,98;UBERON:0002193,1.47e-09,108;UBERON:0002384,5.43e-09,371;UBERON:0000926,1.32e-08,315;UBERON:0004120,1.32e-08,315;UBERON:0006603,1.32e-08,315 | |||
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| |||
|short_description=p@chr15:90335773..90335792,- | |||
}} |
Revision as of 08:48, 11 September 2013
Short description: | p@chr15:90335773..90335792, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:90335773..90335792, - |
Coexpression cluster: | C403_small_Neutrophils_temporal_leiomyoma_Hair_colon_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.59e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-23 | 42 |
defensive cell | 4.52e-22 | 48 |
phagocyte | 4.52e-22 | 48 |
monopoietic cell | 2.47e-18 | 59 |
monocyte | 2.47e-18 | 59 |
monoblast | 2.47e-18 | 59 |
promonocyte | 2.47e-18 | 59 |
macrophage dendritic cell progenitor | 1.49e-17 | 61 |
myeloid lineage restricted progenitor cell | 8.22e-16 | 66 |
myeloid leukocyte | 1.07e-15 | 72 |
granulocyte monocyte progenitor cell | 1.71e-15 | 67 |
multi fate stem cell | 1.67e-10 | 427 |
hair follicle cell | 2.24e-10 | 5 |
hair follicle dermal papilla cell | 2.28e-10 | 3 |
stem cell of epidermis | 2.28e-10 | 3 |
somatic stem cell | 3.59e-10 | 433 |
stem cell | 9.63e-10 | 441 |
connective tissue cell | 6.38e-09 | 361 |
mesenchymal cell | 9.93e-09 | 354 |
myeloid cell | 1.30e-08 | 108 |
common myeloid progenitor | 1.30e-08 | 108 |
mesenchymal stem cell of adipose | 1.44e-08 | 8 |
skeletal muscle myoblast | 4.22e-07 | 4 |
motile cell | 5.56e-07 | 386 |
nongranular leukocyte | 7.22e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-14 | 76 |
bone element | 5.15e-13 | 82 |
musculoskeletal system | 1.68e-12 | 167 |
skeletal element | 1.70e-12 | 90 |
immune system | 4.97e-12 | 93 |
skeletal system | 1.15e-10 | 100 |
hair follicle | 2.24e-10 | 5 |
hair follicle placode | 2.24e-10 | 5 |
dermal papilla | 2.28e-10 | 3 |
papillary layer of dermis | 2.28e-10 | 3 |
hematopoietic system | 5.54e-10 | 98 |
blood island | 5.54e-10 | 98 |
hemolymphoid system | 1.47e-09 | 108 |
connective tissue | 5.43e-09 | 371 |
mesoderm | 1.32e-08 | 315 |
mesoderm-derived structure | 1.32e-08 | 315 |
presumptive mesoderm | 1.32e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.