FFCP PHASE1:Hg19::chr16:75598979..75598985,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr16:75598979..75598985,-|id=chr16:75598979..75598985,-|ontology_enrichment_celltype=CL:0000738!9.57e-42!140;CL:0002057!3.68e-37!42;CL:0000860!2.90e-34!45;CL:0002031!3.16e-33!124;CL:0000037!6.22e-32!172;CL:0000566!6.22e-32!172;CL:0000988!3.58e-31!182;CL:0002087!6.14e-31!119;CL:0002032!8.48e-29!165;CL:0000837!8.48e-29!165;CL:0000766!2.06e-27!76;CL:0000557!2.64e-27!71;CL:0002009!7.59e-26!65;CL:0000839!2.68e-23!70;CL:0002194!2.99e-22!63;CL:0000576!2.99e-22!63;CL:0000040!2.99e-22!63;CL:0000559!2.99e-22!63;CL:0000763!7.37e-21!112;CL:0000049!7.37e-21!112;CL:0000134!1.02e-12!358;CL:0002320!2.99e-12!365;CL:0000623!8.94e-11!3;CL:0000825!8.94e-11!3;CL:0000219!1.31e-10!390;CL:0000034!2.26e-09!444;CL:0000048!2.36e-09!430;CL:0000723!4.59e-09!436;CL:0000771!1.56e-08!2;CL:0001014!6.95e-08!2;CL:0001016!6.95e-08!2;CL:0000224!7.48e-08!4;CL:0000838!8.34e-08!52;CL:0000542!1.32e-07!53;CL:0000051!1.32e-07!53|ontology_enrichment_celltype_v019=CL:0000771;1.11e-34;2!CL:0000860;3.06e-31;33!CL:0002057;3.06e-31;33!CL:0000473;4.93e-24;39!CL:0000234;4.93e-24;39!CL:0000228;1.44e-17;1!CL:0002372;1.44e-17;1!CL:0000576;2.34e-12;48!CL:0000766;2.05e-10;69!CL:0001014;9.46e-10;2!CL:0001016;9.46e-10;2!CL:0000094;1.99e-09;8!CL:0000763;1.27e-07;100!CL:0000081;4.30e-07;11|ontology_enrichment_celltype_v019_2=CL:0000771,1.11e-34,2;CL:0000860,1.65e-24,42;CL:0002057,1.65e-24,42;CL:0000766,7.05e-22,72;CL:0000473,2.16e-21,48;CL:0000234,2.16e-21,48;CL:0002009,7.27e-21,61;CL:0000557,5.69e-19,67;CL:0000763,1.47e-17,108;CL:0000049,1.47e-17,108;CL:0000228,1.70e-17,1;CL:0002372,1.70e-17,1;CL:0002194,5.08e-17,59;CL:0000576,5.08e-17,59;CL:0000040,5.08e-17,59;CL:0000559,5.08e-17,59;CL:0000839,3.44e-15,66;CL:0000738,8.47e-14,136;CL:0002032,1.57e-11,161;CL:0000837,1.57e-11,161;CL:0000037,5.14e-11,168;CL:0000988,2.07e-10,177;CL:0002031,2.32e-10,120;CL:0001014,9.46e-10,2;CL:0001016,9.46e-10,2;CL:0000094,1.99e-09,8;CL:0002087,1.58e-08,115;CL:0000081,4.30e-07,11|ontology_enrichment_development_v019=CL:0002057;5.01e-17;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.79e-23!80;UBERON:0002390!3.16e-23!102;UBERON:0003061!3.16e-23!102;UBERON:0001474!2.31e-21!86;UBERON:0002193!1.84e-20!112;UBERON:0002405!2.46e-18!115;UBERON:0004765!3.46e-17!101;UBERON:0001434!3.46e-17!101;UBERON:0002384!1.30e-11!375;UBERON:0002204!1.07e-08!167;UBERON:0003081!1.76e-08!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-16,76;UBERON:0001474,1.99e-15,82;UBERON:0004765,5.17e-14,90;UBERON:0002405,1.52e-13,93;UBERON:0002390,7.97e-13,98;UBERON:0003061,7.97e-13,98;UBERON:0001434,1.48e-12,100;UBERON:0002193,1.39e-11,108;UBERON:0002204,5.34e-09,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0.242584061187816,0.697287110717054,0,4.95530193432166,0.575384784644301,0.768482119587302,4.25668013799453,6.89491361473237,1.93645405075148,5.41705946377367,0.376484679085209,0.272906150057846,0.224723484445085,1.83650335422542,0.641858054152187,6.39337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0.502497330513487,0,5.42972111762792,0,0,0.632924774881769,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0.197030760201927,0.862510299438069,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr16:75598979..75598985,- | |||
|id=chr16:75598979..75598985,- | |||
|ontology_enrichment_celltype=CL:0000738!9.57e-42!140;CL:0002057!3.68e-37!42;CL:0000860!2.90e-34!45;CL:0002031!3.16e-33!124;CL:0000037!6.22e-32!172;CL:0000566!6.22e-32!172;CL:0000988!3.58e-31!182;CL:0002087!6.14e-31!119;CL:0002032!8.48e-29!165;CL:0000837!8.48e-29!165;CL:0000766!2.06e-27!76;CL:0000557!2.64e-27!71;CL:0002009!7.59e-26!65;CL:0000839!2.68e-23!70;CL:0002194!2.99e-22!63;CL:0000576!2.99e-22!63;CL:0000040!2.99e-22!63;CL:0000559!2.99e-22!63;CL:0000763!7.37e-21!112;CL:0000049!7.37e-21!112;CL:0000134!1.02e-12!358;CL:0002320!2.99e-12!365;CL:0000623!8.94e-11!3;CL:0000825!8.94e-11!3;CL:0000219!1.31e-10!390;CL:0000034!2.26e-09!444;CL:0000048!2.36e-09!430;CL:0000723!4.59e-09!436;CL:0000771!1.56e-08!2;CL:0001014!6.95e-08!2;CL:0001016!6.95e-08!2;CL:0000224!7.48e-08!4;CL:0000838!8.34e-08!52;CL:0000542!1.32e-07!53;CL:0000051!1.32e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000771;1.11e-34;2!CL:0000860;3.06e-31;33!CL:0002057;3.06e-31;33!CL:0000473;4.93e-24;39!CL:0000234;4.93e-24;39!CL:0000228;1.44e-17;1!CL:0002372;1.44e-17;1!CL:0000576;2.34e-12;48!CL:0000766;2.05e-10;69!CL:0001014;9.46e-10;2!CL:0001016;9.46e-10;2!CL:0000094;1.99e-09;8!CL:0000763;1.27e-07;100!CL:0000081;4.30e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.11e-34,2;CL:0000860,1.65e-24,42;CL:0002057,1.65e-24,42;CL:0000766,7.05e-22,72;CL:0000473,2.16e-21,48;CL:0000234,2.16e-21,48;CL:0002009,7.27e-21,61;CL:0000557,5.69e-19,67;CL:0000763,1.47e-17,108;CL:0000049,1.47e-17,108;CL:0000228,1.70e-17,1;CL:0002372,1.70e-17,1;CL:0002194,5.08e-17,59;CL:0000576,5.08e-17,59;CL:0000040,5.08e-17,59;CL:0000559,5.08e-17,59;CL:0000839,3.44e-15,66;CL:0000738,8.47e-14,136;CL:0002032,1.57e-11,161;CL:0000837,1.57e-11,161;CL:0000037,5.14e-11,168;CL:0000988,2.07e-10,177;CL:0002031,2.32e-10,120;CL:0001014,9.46e-10,2;CL:0001016,9.46e-10,2;CL:0000094,1.99e-09,8;CL:0002087,1.58e-08,115;CL:0000081,4.30e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.01e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.79e-23!80;UBERON:0002390!3.16e-23!102;UBERON:0003061!3.16e-23!102;UBERON:0001474!2.31e-21!86;UBERON:0002193!1.84e-20!112;UBERON:0002405!2.46e-18!115;UBERON:0004765!3.46e-17!101;UBERON:0001434!3.46e-17!101;UBERON:0002384!1.30e-11!375;UBERON:0002204!1.07e-08!167;UBERON:0003081!1.76e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-16,76;UBERON:0001474,1.99e-15,82;UBERON:0004765,5.17e-14,90;UBERON:0002405,1.52e-13,93;UBERON:0002390,7.97e-13,98;UBERON:0003061,7.97e-13,98;UBERON:0001434,1.48e-12,100;UBERON:0002193,1.39e-11,108;UBERON:0002204,5.34e-09,167 | |||
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|short_description=p@chr16:75598979..75598985,- | |||
}} |
Revision as of 11:35, 11 September 2013
Short description: | p@chr16:75598979..75598985, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:75598979..75598985, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.11e-34 | 2 |
classical monocyte | 1.65e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-24 | 42 |
myeloid leukocyte | 7.05e-22 | 72 |
defensive cell | 2.16e-21 | 48 |
phagocyte | 2.16e-21 | 48 |
macrophage dendritic cell progenitor | 7.27e-21 | 61 |
granulocyte monocyte progenitor cell | 5.69e-19 | 67 |
myeloid cell | 1.47e-17 | 108 |
common myeloid progenitor | 1.47e-17 | 108 |
multinucleate cell | 1.70e-17 | 1 |
myotube | 1.70e-17 | 1 |
monopoietic cell | 5.08e-17 | 59 |
monocyte | 5.08e-17 | 59 |
monoblast | 5.08e-17 | 59 |
promonocyte | 5.08e-17 | 59 |
myeloid lineage restricted progenitor cell | 3.44e-15 | 66 |
leukocyte | 8.47e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.57e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-11 | 161 |
hematopoietic stem cell | 5.14e-11 | 168 |
hematopoietic cell | 2.07e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 2.32e-10 | 120 |
CD1a-positive Langerhans cell | 9.46e-10 | 2 |
immature CD1a-positive Langerhans cell | 9.46e-10 | 2 |
granulocyte | 1.99e-09 | 8 |
nongranular leukocyte | 1.58e-08 | 115 |
blood cell | 4.30e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-16 | 76 |
bone element | 1.99e-15 | 82 |
skeletal element | 5.17e-14 | 90 |
immune system | 1.52e-13 | 93 |
hematopoietic system | 7.97e-13 | 98 |
blood island | 7.97e-13 | 98 |
skeletal system | 1.48e-12 | 100 |
hemolymphoid system | 1.39e-11 | 108 |
musculoskeletal system | 5.34e-09 | 167 |
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