FFCP PHASE1:Hg19::chr17:42988799..42988810,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |||
|TSSclassifier=S | |||
|UniProt=A1L194 | |||
|association_with_transcript=-1bp_to_BC127871_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_23_at_GFAP_5end | |||
|id=chr17:42988799..42988810,- | |||
|ontology_enrichment_celltype=CL:0000128!3.33e-10!7;CL:0000126!3.33e-10!7;CL:0000127!3.33e-10!7;CL:0002453!3.33e-10!7;CL:0002605!1.48e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.16e-17;3!CL:0000128;2.27e-13;7!CL:0000126;2.27e-13;7!CL:0000127;2.27e-13;7 | |||
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|short_description=p23@GFAP | |||
}} |
Revision as of 13:59, 11 September 2013
Short description: | p23@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -1bp_to_BC127871_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | A1L194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.47e-17 | 3 |
oligodendrocyte | 2.85e-13 | 7 |
macroglial cell | 2.85e-13 | 7 |
astrocyte | 2.85e-13 | 7 |
oligodendrocyte precursor cell | 2.85e-13 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.