FFCP PHASE1:Hg19::chr17:73584515..73584582,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80022|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14083|TSSclassifier=W|UniProt=Q96JP2|association_with_transcript=376bp_to_ENST00000293201,NR_003587,uc002jom.1,uc002jon.1,uc002joo.1,uc010dgh.2,uc010wse.1_5end|coexpression_cluster_id=C805|description=CAGE_peak_1_at_MYO15B_5end|id=chr17:73584515..73584582,+|ontology_enrichment_celltype=CL:0000037!1.81e-39!172;CL:0000566!1.81e-39!172;CL:0002032!4.27e-36!165;CL:0000837!4.27e-36!165;CL:0000988!5.03e-35!182;CL:0000763!1.26e-33!112;CL:0000049!1.26e-33!112;CL:0000738!3.84e-31!140;CL:0000766!7.60e-28!76;CL:0002031!2.88e-25!124;CL:0002087!7.40e-24!119;CL:0000839!8.59e-24!70;CL:0000557!1.32e-23!71;CL:0002057!8.68e-23!42;CL:0002194!1.23e-20!63;CL:0000576!1.23e-20!63;CL:0000040!1.23e-20!63;CL:0000559!1.23e-20!63;CL:0002009!5.96e-20!65;CL:0000860!8.32e-20!45;CL:0002393!1.50e-07!9;CL:0002397!1.50e-07!9|ontology_enrichment_celltype_v019=CL:0000576;4.81e-19;48!CL:0000860;1.69e-18;33!CL:0002057;1.69e-18;33!CL:0000766;8.29e-17;69!CL:0000473;5.13e-16;39!CL:0000234;5.13e-16;39!CL:0000763;5.42e-14;100!CL:0002087;9.83e-10;104!CL:0000738;1.46e-08;136!CL:0000988;2.69e-07;177!CL:0000236;4.89e-07;13|ontology_enrichment_celltype_v019_2=CL:0000037,7.73e-47,168;CL:0002032,1.47e-42,161;CL:0000837,1.47e-42,161;CL:0000988,4.92e-42,177;CL:0000763,1.83e-41,108;CL:0000049,1.83e-41,108;CL:0000766,9.11e-39,72;CL:0000738,3.27e-38,136;CL:0000839,1.55e-33,66;CL:0000557,1.41e-32,67;CL:0002031,9.74e-32,120;CL:0002087,1.21e-30,115;CL:0002194,1.52e-29,59;CL:0000576,1.52e-29,59;CL:0000040,1.52e-29,59;CL:0000559,1.52e-29,59;CL:0002009,7.32e-28,61;CL:0000860,1.19e-27,42;CL:0002057,1.19e-27,42;CL:0000473,1.40e-27,48;CL:0000234,1.40e-27,48;CL:0002393,6.39e-09,9;CL:0002397,6.39e-09,9|ontology_enrichment_development_v019=CL:0002057;6.50e-20;42!CL:0000049;3.05e-12;108|ontology_enrichment_disease=DOID:8692!3.63e-07!31|ontology_enrichment_disease_v019=DOID:8692;8.62e-07;31|ontology_enrichment_disease_v019_2=DOID:8692,3.44e-07,31|ontology_enrichment_uberon=UBERON:0007023!1.07e-37!115;UBERON:0002390!9.39e-26!102;UBERON:0003061!9.39e-26!102;UBERON:0002193!3.07e-25!112;UBERON:0002371!1.86e-19!80;UBERON:0001474!3.81e-16!86;UBERON:0002405!1.73e-15!115;UBERON:0001049!8.70e-12!57;UBERON:0005068!8.70e-12!57;UBERON:0006241!8.70e-12!57;UBERON:0007135!8.70e-12!57;UBERON:0004765!4.96e-11!101;UBERON:0001434!4.96e-11!101;UBERON:0002616!8.04e-10!59;UBERON:0003080!3.00e-09!42;UBERON:0002780!4.52e-09!41;UBERON:0001890!4.52e-09!41;UBERON:0006240!4.52e-09!41;UBERON:0001893!1.37e-07!34;UBERON:0002020!1.54e-07!34;UBERON:0003528!1.54e-07!34;UBERON:0002791!2.42e-07!33;UBERON:0003081!2.51e-07!216;UBERON:0001017!3.42e-07!82;UBERON:0000955!7.01e-07!69;UBERON:0006238!7.01e-07!69;UBERON:0003075!8.70e-07!86;UBERON:0007284!8.70e-07!86|ontology_enrichment_uberon_v019=UBERON:0007023;1.56e-10;114!UBERON:0000178;2.51e-08;15!UBERON:0000179;2.51e-08;15!UBERON:0000463;2.51e-08;15!UBERON:0000073;8.40e-07;53!UBERON:0002616;8.40e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.72e-39,114;UBERON:0002390,2.22e-35,98;UBERON:0003061,2.22e-35,98;UBERON:0002193,9.05e-34,108;UBERON:0002371,2.61e-27,76;UBERON:0002405,1.99e-26,93;UBERON:0001474,1.46e-23,82;UBERON:0004765,4.90e-20,90;UBERON:0001434,1.07e-16,100;UBERON:0003081,4.30e-12,203;UBERON:0001049,1.36e-11,56;UBERON:0005068,1.36e-11,56;UBERON:0006241,1.36e-11,56;UBERON:0007135,1.36e-11,56;UBERON:0000073,1.97e-10,53;UBERON:0002616,1.97e-10,53;UBERON:0002780,1.17e-08,41;UBERON:0001890,1.17e-08,41;UBERON:0003080,1.17e-08,41;UBERON:0006240,1.17e-08,41;UBERON:0000178,2.41e-08,15;UBERON:0000179,2.41e-08,15;UBERON:0000463,2.41e-08,15;UBERON:0001893,2.12e-07,34;UBERON:0003528,2.42e-07,34;UBERON:0002020,2.42e-07,34;UBERON:0003075,5.16e-07,82;UBERON:0007284,5.16e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.157421562627358,11.4075640286182,12.2825407391108,12.23047374197,0,0,0,0,0,14.9736224060772,24.3757979754026,22.2604336691857,19.9650001058584,5.82180233023803,3.88672399222775,5.6666624879521,8.57849608799432,5.29026321164333,8.24785808038575,7.90258725479328,9.86802931252382,8.05236564327269,7.48000220037591,7.94098190240212,2.60130452877444,9.65287906062532,6.45484683583826,10.8341189275473,7.34145124216158,5.18521685109907,3.59557575112135,10.1007684482398,6.41858054152187,8.31138263538754,4.61791820261403,7.77908264724364,5.11469700639233,9.86711411337186,5.6738522469114,4.9825779919646,8.79370328398601,7.30076085788282,5.42972111762792,10.8971910474006,4.05105399586321,5.37986058649504,5.28138215779854,11.4806321981124,9.43463904787692,7.97533281140115,11.7137976416375,5.30394436100364,18.5258283431812,17.3057509163208,12.0558341484658,5.27988733383968,4.91524750135918,12.4531295540898,13.2286368995617,12.0118796110804,8.04653415936277,9.25462821898807,8.58648379081828,21.0608798570496,4.11066032559657,15.2909291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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80022 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14083 | |||
|TSSclassifier=W | |||
|UniProt=Q96JP2 | |||
|association_with_transcript=376bp_to_ENST00000293201,NR_003587,uc002jom.1,uc002jon.1,uc002joo.1,uc010dgh.2,uc010wse.1_5end | |||
|coexpression_cluster_id=C805 | |||
|description=CAGE_peak_1_at_MYO15B_5end | |||
|id=chr17:73584515..73584582,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.81e-39!172;CL:0000566!1.81e-39!172;CL:0002032!4.27e-36!165;CL:0000837!4.27e-36!165;CL:0000988!5.03e-35!182;CL:0000763!1.26e-33!112;CL:0000049!1.26e-33!112;CL:0000738!3.84e-31!140;CL:0000766!7.60e-28!76;CL:0002031!2.88e-25!124;CL:0002087!7.40e-24!119;CL:0000839!8.59e-24!70;CL:0000557!1.32e-23!71;CL:0002057!8.68e-23!42;CL:0002194!1.23e-20!63;CL:0000576!1.23e-20!63;CL:0000040!1.23e-20!63;CL:0000559!1.23e-20!63;CL:0002009!5.96e-20!65;CL:0000860!8.32e-20!45;CL:0002393!1.50e-07!9;CL:0002397!1.50e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.81e-19;48!CL:0000860;1.69e-18;33!CL:0002057;1.69e-18;33!CL:0000766;8.29e-17;69!CL:0000473;5.13e-16;39!CL:0000234;5.13e-16;39!CL:0000763;5.42e-14;100!CL:0002087;9.83e-10;104!CL:0000738;1.46e-08;136!CL:0000988;2.69e-07;177!CL:0000236;4.89e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.73e-47,168;CL:0002032,1.47e-42,161;CL:0000837,1.47e-42,161;CL:0000988,4.92e-42,177;CL:0000763,1.83e-41,108;CL:0000049,1.83e-41,108;CL:0000766,9.11e-39,72;CL:0000738,3.27e-38,136;CL:0000839,1.55e-33,66;CL:0000557,1.41e-32,67;CL:0002031,9.74e-32,120;CL:0002087,1.21e-30,115;CL:0002194,1.52e-29,59;CL:0000576,1.52e-29,59;CL:0000040,1.52e-29,59;CL:0000559,1.52e-29,59;CL:0002009,7.32e-28,61;CL:0000860,1.19e-27,42;CL:0002057,1.19e-27,42;CL:0000473,1.40e-27,48;CL:0000234,1.40e-27,48;CL:0002393,6.39e-09,9;CL:0002397,6.39e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.50e-20;42!CL:0000049;3.05e-12;108 | |||
|ontology_enrichment_disease=DOID:8692!3.63e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.62e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.44e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-37!115;UBERON:0002390!9.39e-26!102;UBERON:0003061!9.39e-26!102;UBERON:0002193!3.07e-25!112;UBERON:0002371!1.86e-19!80;UBERON:0001474!3.81e-16!86;UBERON:0002405!1.73e-15!115;UBERON:0001049!8.70e-12!57;UBERON:0005068!8.70e-12!57;UBERON:0006241!8.70e-12!57;UBERON:0007135!8.70e-12!57;UBERON:0004765!4.96e-11!101;UBERON:0001434!4.96e-11!101;UBERON:0002616!8.04e-10!59;UBERON:0003080!3.00e-09!42;UBERON:0002780!4.52e-09!41;UBERON:0001890!4.52e-09!41;UBERON:0006240!4.52e-09!41;UBERON:0001893!1.37e-07!34;UBERON:0002020!1.54e-07!34;UBERON:0003528!1.54e-07!34;UBERON:0002791!2.42e-07!33;UBERON:0003081!2.51e-07!216;UBERON:0001017!3.42e-07!82;UBERON:0000955!7.01e-07!69;UBERON:0006238!7.01e-07!69;UBERON:0003075!8.70e-07!86;UBERON:0007284!8.70e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.56e-10;114!UBERON:0000178;2.51e-08;15!UBERON:0000179;2.51e-08;15!UBERON:0000463;2.51e-08;15!UBERON:0000073;8.40e-07;53!UBERON:0002616;8.40e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.72e-39,114;UBERON:0002390,2.22e-35,98;UBERON:0003061,2.22e-35,98;UBERON:0002193,9.05e-34,108;UBERON:0002371,2.61e-27,76;UBERON:0002405,1.99e-26,93;UBERON:0001474,1.46e-23,82;UBERON:0004765,4.90e-20,90;UBERON:0001434,1.07e-16,100;UBERON:0003081,4.30e-12,203;UBERON:0001049,1.36e-11,56;UBERON:0005068,1.36e-11,56;UBERON:0006241,1.36e-11,56;UBERON:0007135,1.36e-11,56;UBERON:0000073,1.97e-10,53;UBERON:0002616,1.97e-10,53;UBERON:0002780,1.17e-08,41;UBERON:0001890,1.17e-08,41;UBERON:0003080,1.17e-08,41;UBERON:0006240,1.17e-08,41;UBERON:0000178,2.41e-08,15;UBERON:0000179,2.41e-08,15;UBERON:0000463,2.41e-08,15;UBERON:0001893,2.12e-07,34;UBERON:0003528,2.42e-07,34;UBERON:0002020,2.42e-07,34;UBERON:0003075,5.16e-07,82;UBERON:0007284,5.16e-07,82 | |||
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| |||
|short_description=p1@MYO15B | |||
}} |
Revision as of 15:39, 11 September 2013
Short description: | p1@MYO15B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MYO15B_5end |
Coexpression cluster: | C805_granulocyte_acute_CD14_Eosinophils_Dendritic_Peripheral_Basophils |
Association with transcript: | 376bp_to_ENST00000293201, NR_003587, uc002jom.1, uc002jon.1, uc002joo.1, uc010dgh.2, uc010wse.1_5end |
EntrezGene: | MYO15B |
HGNC: | 14083 |
UniProt: | Q96JP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.73e-47 | 168 |
hematopoietic oligopotent progenitor cell | 1.47e-42 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-42 | 161 |
hematopoietic cell | 4.92e-42 | 177 |
myeloid cell | 1.83e-41 | 108 |
common myeloid progenitor | 1.83e-41 | 108 |
myeloid leukocyte | 9.11e-39 | 72 |
leukocyte | 3.27e-38 | 136 |
myeloid lineage restricted progenitor cell | 1.55e-33 | 66 |
granulocyte monocyte progenitor cell | 1.41e-32 | 67 |
hematopoietic lineage restricted progenitor cell | 9.74e-32 | 120 |
nongranular leukocyte | 1.21e-30 | 115 |
monopoietic cell | 1.52e-29 | 59 |
monocyte | 1.52e-29 | 59 |
monoblast | 1.52e-29 | 59 |
promonocyte | 1.52e-29 | 59 |
macrophage dendritic cell progenitor | 7.32e-28 | 61 |
classical monocyte | 1.19e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-27 | 42 |
defensive cell | 1.40e-27 | 48 |
phagocyte | 1.40e-27 | 48 |
intermediate monocyte | 6.39e-09 | 9 |
CD14-positive, CD16-positive monocyte | 6.39e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.72e-39 | 114 |
hematopoietic system | 2.22e-35 | 98 |
blood island | 2.22e-35 | 98 |
hemolymphoid system | 9.05e-34 | 108 |
bone marrow | 2.61e-27 | 76 |
immune system | 1.99e-26 | 93 |
bone element | 1.46e-23 | 82 |
skeletal element | 4.90e-20 | 90 |
skeletal system | 1.07e-16 | 100 |
lateral plate mesoderm | 4.30e-12 | 203 |
neural tube | 1.36e-11 | 56 |
neural rod | 1.36e-11 | 56 |
future spinal cord | 1.36e-11 | 56 |
neural keel | 1.36e-11 | 56 |
regional part of nervous system | 1.97e-10 | 53 |
regional part of brain | 1.97e-10 | 53 |
regional part of forebrain | 1.17e-08 | 41 |
forebrain | 1.17e-08 | 41 |
anterior neural tube | 1.17e-08 | 41 |
future forebrain | 1.17e-08 | 41 |
blood | 2.41e-08 | 15 |
haemolymphatic fluid | 2.41e-08 | 15 |
organism substance | 2.41e-08 | 15 |
telencephalon | 2.12e-07 | 34 |
brain grey matter | 2.42e-07 | 34 |
gray matter | 2.42e-07 | 34 |
neural plate | 5.16e-07 | 82 |
presumptive neural plate | 5.16e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.44e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.