FFCP PHASE1:Hg19::chr1:22214518..22214534,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C547 | |||
|description=CAGE_peak_at_chr1:22214518..22214534,- | |||
|id=chr1:22214518..22214534,- | |||
|ontology_enrichment_celltype=CL:0000222!2.11e-22!119;CL:0000115!8.12e-18!35;CL:0002078!1.07e-17!44;CL:0002139!2.16e-17!24;CL:0002321!3.77e-16!248;CL:0000220!4.86e-16!246;CL:0000213!1.06e-14!57;CL:0000215!1.06e-14!57;CL:0000071!1.13e-13!18;CL:0002546!1.13e-13!18;CL:0000055!3.43e-12!180;CL:0000057!1.66e-08!75;CL:0000680!1.69e-08!57;CL:0000056!1.69e-08!57;CL:0000355!1.69e-08!57;CL:0000183!2.69e-08!59;CL:1000413!8.32e-08!9;CL:0000187!1.46e-07!54;CL:0000359!8.80e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.18e-30;24!CL:0000115;3.18e-27;36!CL:0000071;1.45e-23;18!CL:0002078;1.22e-20;45!CL:0000213;4.72e-16;58!CL:0000215;4.72e-16;58!CL:1000413;5.54e-13;9!CL:0002543;4.57e-09;6!CL:0002544;6.20e-09;6!CL:0002138;2.30e-08;6!CL:0002188;6.51e-08;5!CL:1000746;1.83e-07;7!CL:1000612;1.83e-07;7!CL:0002595;2.69e-07;5!CL:0000359;4.87e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.84e-32,36;CL:0002078,7.52e-31,45;CL:0002139,2.50e-30,24;CL:0000213,5.46e-26,58;CL:0000215,5.46e-26,58;CL:0000071,1.50e-23,18;CL:0002546,1.50e-23,18;CL:0000222,5.93e-23,121;CL:1000413,6.73e-13,9;CL:0002321,1.27e-09,250;CL:0002543,4.84e-09,6;CL:0002544,7.36e-09,6;CL:0000057,1.56e-08,76;CL:0005020,2.54e-08,6;CL:0002138,2.54e-08,6;CL:0005022,2.54e-08,6;CL:0002188,8.43e-08,5;CL:0002595,2.07e-07,5;CL:1000746,2.27e-07,7;CL:1000612,2.27e-07,7;CL:0000359,2.47e-07,32;CL:0000076,4.65e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.45e-23;18!CL:0005022;2.30e-08;6!CL:0000222;1.00e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!8.45e-29!69;UBERON:0004872!2.35e-28!84;UBERON:0002049!1.30e-27!79;UBERON:0007798!1.30e-27!79;UBERON:0001981!9.62e-25!60;UBERON:0007500!9.62e-25!60;UBERON:0004537!9.62e-25!60;UBERON:0006965!9.62e-25!60;UBERON:0003914!1.31e-24!118;UBERON:0001009!4.42e-22!113;UBERON:0004535!1.53e-21!110;UBERON:0001637!1.43e-16!42;UBERON:0003509!1.43e-16!42;UBERON:0004572!1.43e-16!42;UBERON:0004573!1.09e-13!33;UBERON:0004571!1.09e-13!33;UBERON:0001986!1.13e-13!18;UBERON:0004638!1.13e-13!18;UBERON:0004852!1.13e-13!18;UBERON:0004111!1.54e-13!241;UBERON:0006914!4.47e-13!25;UBERON:0000487!5.47e-13!22;UBERON:0000490!6.50e-13!138;UBERON:0000477!8.35e-11!286;UBERON:0005256!1.48e-10!143;UBERON:0002100!2.57e-10!216;UBERON:0000468!2.65e-09!659;UBERON:0000947!5.18e-09!21;UBERON:0010191!5.18e-09!21;UBERON:0002385!5.94e-09!63;UBERON:0001015!5.94e-09!63;UBERON:0000383!5.94e-09!63;UBERON:0000483!7.87e-09!309;UBERON:0003103!7.92e-09!69;UBERON:0000119!1.04e-08!312;UBERON:0001134!1.24e-08!61;UBERON:0002036!1.24e-08!61;UBERON:0003082!1.24e-08!61;UBERON:0000025!1.58e-08!194;UBERON:0004290!5.34e-08!70;UBERON:0000486!7.87e-08!82;UBERON:0003915!8.32e-08!9;UBERON:0004700!8.32e-08!9;UBERON:0001917!8.32e-08!9;UBERON:0000926!1.89e-07!448;UBERON:0004120!1.89e-07!448;UBERON:0006603!1.89e-07!448;UBERON:0007100!2.88e-07!27;UBERON:0000914!6.30e-07!83;UBERON:0002329!6.30e-07!83;UBERON:0003077!6.30e-07!83;UBERON:0003059!6.30e-07!83;UBERON:0007282!6.30e-07!83;UBERON:0009618!6.30e-07!83;UBERON:0007285!6.30e-07!83;UBERON:0000948!7.73e-07!24;UBERON:0005498!7.73e-07!24;UBERON:0004140!7.73e-07!24;UBERON:0009881!7.73e-07!24;UBERON:0004141!7.73e-07!24;UBERON:0003084!7.73e-07!24;UBERON:0007005!7.73e-07!24;UBERON:0004139!7.73e-07!24;UBERON:0004291!7.73e-07!24;UBERON:0000467!7.74e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.45e-23;18!UBERON:0001986;1.45e-23;18!UBERON:0004852;1.45e-23;18!UBERON:0006914;3.12e-21;25!UBERON:0000055;4.97e-21;65!UBERON:0000487;2.21e-20;22!UBERON:0007500;3.18e-18;56!UBERON:0001981;3.18e-18;56!UBERON:0004537;3.18e-18;56!UBERON:0001637;3.36e-18;42!UBERON:0003509;3.36e-18;42!UBERON:0004572;3.36e-18;42!UBERON:0004573;3.15e-16;33!UBERON:0004571;3.15e-16;33!UBERON:0002049;4.58e-15;75!UBERON:0007798;4.58e-15;75!UBERON:0003914;6.57e-14;74!UBERON:0003915;5.54e-13;9!UBERON:0004700;5.54e-13;9!UBERON:0001917;5.54e-13;9!UBERON:0000947;4.24e-12;21!UBERON:0010191;4.24e-12;21!UBERON:0000490;7.57e-12;33!UBERON:0001473;3.40e-10;8!UBERON:0004536;3.40e-10;8!UBERON:0006558;3.40e-10;8!UBERON:0004535;4.81e-10;109!UBERON:0003513;4.82e-10;7!UBERON:0004457;1.05e-08;9!UBERON:0000042;1.05e-08;9!UBERON:0000025;1.62e-08;93!UBERON:0001009;2.04e-08;112!UBERON:0003688;5.40e-08;6!UBERON:0002358;5.40e-08;6!UBERON:0003684;5.40e-08;6!UBERON:0001178;5.40e-08;6!UBERON:0002465;9.25e-08;10!UBERON:0000074;1.83e-07;7!UBERON:0001229;1.83e-07;7!UBERON:0003834;2.69e-07;5!UBERON:0001533;2.69e-07;5!UBERON:0001638;3.41e-07;9!UBERON:0003920;3.41e-07;9!UBERON:0004582;3.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.16e-44,68;UBERON:0002049,3.24e-37,78;UBERON:0007798,3.24e-37,78;UBERON:0007500,3.51e-36,59;UBERON:0001981,3.51e-36,59;UBERON:0004537,3.51e-36,59;UBERON:0006965,3.51e-36,59;UBERON:0004872,2.17e-33,83;UBERON:0004535,2.48e-28,109;UBERON:0001009,4.48e-28,112;UBERON:0003914,5.65e-25,117;UBERON:0004638,1.50e-23,18;UBERON:0001986,1.50e-23,18;UBERON:0004852,1.50e-23,18;UBERON:0001637,2.18e-22,42;UBERON:0003509,2.18e-22,42;UBERON:0004572,2.18e-22,42;UBERON:0006914,2.89e-21,25;UBERON:0000487,2.36e-20,22;UBERON:0004573,3.00e-17,33;UBERON:0004571,3.00e-17,33;UBERON:0000926,1.48e-13,315;UBERON:0004120,1.48e-13,315;UBERON:0006603,1.48e-13,315;UBERON:0003915,6.73e-13,9;UBERON:0004700,6.73e-13,9;UBERON:0001917,6.73e-13,9;UBERON:0000947,1.68e-12,21;UBERON:0010191,1.68e-12,21;UBERON:0003081,1.96e-12,203;UBERON:0004111,6.59e-11,240;UBERON:0004876,1.33e-10,11;UBERON:0001473,2.28e-10,8;UBERON:0004536,2.28e-10,8;UBERON:0006558,2.28e-10,8;UBERON:0003513,3.77e-10,7;UBERON:0000080,9.64e-09,9;UBERON:0002120,9.64e-09,9;UBERON:0004875,9.64e-09,9;UBERON:0005721,9.64e-09,9;UBERON:0005754,9.64e-09,9;UBERON:0007297,9.64e-09,9;UBERON:0000025,3.63e-08,192;UBERON:0000058,4.71e-08,19;UBERON:0002465,6.80e-08,10;UBERON:0005103,6.87e-08,8;UBERON:0000083,6.87e-08,8;UBERON:0009201,6.87e-08,8;UBERON:0006553,6.87e-08,8;UBERON:0003074,6.87e-08,8;UBERON:0003060,6.87e-08,8;UBERON:0003688,8.29e-08,6;UBERON:0002358,8.29e-08,6;UBERON:0003684,8.29e-08,6;UBERON:0001178,8.29e-08,6;UBERON:0004797,1.26e-07,7;UBERON:0003834,2.07e-07,5;UBERON:0001533,2.07e-07,5;UBERON:0010532,2.27e-07,7;UBERON:0000074,2.27e-07,7;UBERON:0001229,2.27e-07,7;UBERON:0001230,2.27e-07,7;UBERON:0003220,2.27e-07,7;UBERON:0005749,2.27e-07,7;UBERON:0004199,2.27e-07,7;UBERON:0004209,2.27e-07,7;UBERON:0004198,2.27e-07,7;UBERON:0001638,3.47e-07,9;UBERON:0003920,3.47e-07,9;UBERON:0004582,3.47e-07,9;UBERON:0000490,6.40e-07,148 | |||
|phase1_expression=1.45342703416445,6.63711624062048,2.81908808191942,9.00659685178174,6.25745532198203,0.872338524100369,0,0,2.87304191019822,0.982935746006035,5.58240934377942,1.96597234917155,1.58260186937072,0,0.331397375727916,1.34465029290355,1.80808358407193,0.730310090387373,0,0.369363174230364,0.408001382488506,0.940364164434263,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,1.44575660953827,1.50401373190767,1.88300474649071,0,2.91980922181582,0.0945348171640679,0.443458794925128,0.175669571386252,0.261958150995425,0,0.741568885568859,0,0,0,0,0,0,2.58391129576717,6.02164216574287,4.16568601929113,10.1755429546322,17.1994768846061,9.62913146790236,7.73281376186199,4.13466814670926,4.26919515224052,5.35552980423472,3.62546385398232,1.52054421143703,8.05404789908959,2.20597848207521,21.0636906449257,4.46498641420399,4.71511682514957,2.36484109014977,6.13266549863533,10.4419222552494,8.06087673293792,0,0,0.872188104285069,2.48485975847659,1.8994576749687,1.19168262731897,14.3418310374407,2.4826786753885,0.560677600142307,2.1349799145941,0.98667019366864,0,6.33140158727534,2.7788523529288,0.454072282934794,1.15235184896,0,0,0.570471821544449,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0,0.619954687054593,0,1.23633464639278,1.82032272387605,3.59309070908119,0,0,0.277064115484183,0,0.30648779579902,1.35214253015937,0.226864366320042,5.74046834204358,2.56268866582281,1.27159140695737,2.10063767259082,0.618315175430633,3.60696756063881,1.67505170698431,1.35021065793013,1.26668106709558,2.77677151668526,1.19664868234989,1.61646056818812,7.4552014428489,1.20902517873168,0.508681776931463,0.386521706326594,0.545492241181669,0.286804595389004,0.121973706129595,0.397589304964456,0.232387885739037,0.310983165046111,0,0.36497735907583,3.12899064659632,0,0,0.928735856063958,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0,0,0,13.2867981832437,11.2193419042757,0.4115740113314,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.658501712451753,0,0,0.555530670951178,0,1.03993478527958,0,0,0.469634776943287,4.76409277611544,1.38895653772983,3.23432058798817,0,0,0,0,0,0,1.34385702559088,0.141775097242386,0.0895585227028483,0,0,0,0,0.621984346622316,0.288239906833923,0.25248486685276,0.063497894292169,0,0,0,0.616964956219941,0.300343057843917,0.857479297891735,0.224262168690721,0,0.1466765716419,0.775630294546667,3.57656445851882,0,1.06375246633948,0,0,0,0,0.57191197463259,1.08524321078289,0,0,0,0.791951872933429,0.602878754119172,0,1.3996218765488,0,0,0,0,3.44585807502342,0,1.30303176000821,2.4657158706046,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,2.49565033836969,1.96271887676878,1.26161932027148,1.52283839490527,0.601892199455438,0,0,0,0.553107505625109,0.60818530127658,0.391602314925481,0.686286847621712,0,0.215714200818617,0,0.606255142892519,1.66435439510497,1.5119514666484,0.744323423456331,1.68808170616869,5.61320188866147,2.30650468660262,2.55853624533352,1.12597744800525,2.96836132889982,0.616838775210622,0.177561725313127,0.0821271560138091,0.519254429183621,0,1.0877350463246,1.80455823272956,0.276242966807689,0.34444334449382,0.182091168006717,0.655622074797121,0.451199612907412,0.308061348417659,0,2.92278449306521,0.633309773357254,13.6480060885076,4.08224892663638,2.15915916102139,26.2186329573492,0,2.50844886927427,0,0.831076008928724,0.895499018888713,0,0,0,0.984043937099117,0,0.103041011647722,0.457847324091717,0.082509499920588,0,1.30012049207304,3.21367859688319,0.386682873168488,0.616194468458578,0.460511024178389,0.827019434907183,0.322260734604821,0.870100163485371,0.426133137080504,0.534192213880424,0.495854746082934,1.34533047155574,0.382838137483752,0.4046311234222,0,9.75918275174984,0.6970372701606,1.84820148105653,0.532306030317022,1.73986598415015,1.48259375283136,0.286249773483982,0,0,0.38126038784765,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,0.179872457583315,0.274537029736055,0.353437207037059,0.404364963146632,3.17020642346017,3.37006764991185,0,3.1682753652067,6.33900880540533,0.136499911407986,0.565621727814851,1.13008116620243,1.65409603063837,9.95158462861829,4.38450885253763,0.578775534266688,0,1.21746226177622,3.40805847909725,2.53526042279017,0.286822704408103,0,0,0.709522128141196,2.74439925886963,2.63435914367922,0.379473173765715,0.349934720244983,0,0.670302275535787,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0.846694330895531,0.324621940274555,0.561594356226918,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.95497793895076,0,0,0,0,0,0,0.211125408127993,1.59398390600856,0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| |||
|short_description=p@chr1:22214518..22214534,- | |||
}} |
Revision as of 03:48, 12 September 2013
Short description: | p@chr1:22214518..22214534, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:22214518..22214534, - |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.84e-32 | 36 |
meso-epithelial cell | 7.52e-31 | 45 |
endothelial cell of vascular tree | 2.50e-30 | 24 |
lining cell | 5.46e-26 | 58 |
barrier cell | 5.46e-26 | 58 |
blood vessel endothelial cell | 1.50e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.50e-23 | 18 |
mesodermal cell | 5.93e-23 | 121 |
endothelial cell of artery | 6.73e-13 | 9 |
embryonic cell | 1.27e-09 | 250 |
vein endothelial cell | 4.84e-09 | 6 |
aortic endothelial cell | 7.36e-09 | 6 |
fibroblast | 1.56e-08 | 76 |
lymphangioblast | 2.54e-08 | 6 |
endothelial cell of lymphatic vessel | 2.54e-08 | 6 |
vascular lymphangioblast | 2.54e-08 | 6 |
glomerular endothelial cell | 8.43e-08 | 5 |
smooth muscle cell of the subclavian artery | 2.07e-07 | 5 |
glomerular cell | 2.27e-07 | 7 |
kidney corpuscule cell | 2.27e-07 | 7 |
vascular associated smooth muscle cell | 2.47e-07 | 32 |
squamous epithelial cell | 4.65e-07 | 63 |
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