FFCP PHASE1:Hg19::chr21:18885287..18885300,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1525|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2559|TSSclassifier=S|UniProt=P78310|association_with_transcript=-29bp_to_uc002ykh.1,uc002yki.2,uc010gld.1,uc010gle.1_5end|description=CAGE_peak_2_at_CXADR_5end|id=chr21:18885287..18885300,+|ontology_enrichment_celltype=CL:0000066!3.34e-12!254;CL:0000047!3.53e-07!8|ontology_enrichment_celltype_v019=CL:0000540;7.52e-12;6!CL:0000404;7.52e-12;6!CL:0002322;1.81e-09;5!CL:0000039;4.95e-07;7!CL:0000586;4.95e-07;7!CL:0002319;7.65e-07;25|ontology_enrichment_celltype_v019_2=CL:0000047,1.19e-16,8;CL:0000540,6.21e-12,6;CL:0000031,6.21e-12,6;CL:0000404,6.21e-12,6;CL:0002322,1.46e-09,5;CL:0000039,3.47e-07,7;CL:0000586,3.47e-07,7;CL:0002319,7.32e-07,25|ontology_enrichment_development_v019=CL:0000031;7.52e-12;6|ontology_enrichment_disease=DOID:0050687!7.75e-14!143;DOID:305!4.00e-12!106;DOID:162!5.83e-09!235;DOID:14566!1.44e-08!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.17e-29!94;UBERON:0001016!7.17e-29!94;UBERON:0005743!7.83e-28!86;UBERON:0001017!2.63e-27!82;UBERON:0002346!1.99e-24!90;UBERON:0003075!6.72e-23!86;UBERON:0007284!6.72e-23!86;UBERON:0001049!5.45e-21!57;UBERON:0005068!5.45e-21!57;UBERON:0006241!5.45e-21!57;UBERON:0007135!5.45e-21!57;UBERON:0000955!1.62e-19!69;UBERON:0006238!1.62e-19!69;UBERON:0000924!3.99e-19!173;UBERON:0006601!3.99e-19!173;UBERON:0003056!4.75e-18!61;UBERON:0004121!7.91e-18!169;UBERON:0003080!1.03e-17!42;UBERON:0002616!1.61e-17!59;UBERON:0002780!3.07e-17!41;UBERON:0001890!3.07e-17!41;UBERON:0006240!3.07e-17!41;UBERON:0001893!1.04e-15!34;UBERON:0002020!1.08e-15!34;UBERON:0003528!1.08e-15!34;UBERON:0002791!3.80e-15!33;UBERON:0001869!2.89e-14!32;UBERON:0000033!4.01e-13!123;UBERON:0007023!3.81e-12!115;UBERON:0000153!1.03e-11!129;UBERON:0007811!1.03e-11!129;UBERON:0000956!2.23e-11!25;UBERON:0000203!2.23e-11!25;UBERON:0000477!3.98e-11!286;UBERON:0004111!1.95e-10!241;UBERON:0002619!3.29e-10!22;UBERON:0000025!3.96e-10!194;UBERON:0000064!1.29e-09!219;UBERON:0000922!4.32e-09!612;UBERON:0001950!5.93e-09!20;UBERON:0000483!3.92e-08!309;UBERON:0000119!4.07e-08!312;UBERON:0000923!7.65e-08!604;UBERON:0005291!7.65e-08!604;UBERON:0006598!7.65e-08!604;UBERON:0002532!7.65e-08!604;UBERON:0002050!1.01e-07!605;UBERON:0005423!1.01e-07!605;UBERON:0000468!1.21e-07!659;UBERON:0000480!3.12e-07!626;UBERON:0000467!4.24e-07!625|ontology_enrichment_uberon_v019=UBERON:0002780;2.68e-11;41!UBERON:0001890;2.68e-11;41!UBERON:0001017;5.07e-10;75!UBERON:0000922;1.30e-09;49!UBERON:0001016;8.44e-09;83!UBERON:0001893;4.55e-08;34!UBERON:0003528;7.33e-08;34!UBERON:0002020;7.33e-08;34!UBERON:0002791;7.44e-08;32!UBERON:0000073;1.37e-07;53!UBERON:0002616;1.37e-07;53!UBERON:0005162;2.59e-07;2!UBERON:0000122;2.59e-07;2!UBERON:0000955;4.92e-07;68!UBERON:0002784;5.26e-07;4!UBERON:0001869;5.47e-07;32!UBERON:0002619;5.53e-07;22!UBERON:0003714;6.60e-07;2!UBERON:0001897;7.30e-07;2!UBERON:0010225;7.30e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.82e-27,89;UBERON:0001017,5.31e-27,81;UBERON:0001049,5.48e-17,56;UBERON:0005068,5.48e-17,56;UBERON:0006241,5.48e-17,56;UBERON:0007135,5.48e-17,56;UBERON:0002346,2.13e-15,86;UBERON:0003075,5.11e-15,82;UBERON:0007284,5.11e-15,82;UBERON:0004121,9.70e-15,171;UBERON:0000924,9.70e-15,171;UBERON:0006601,9.70e-15,171;UBERON:0000073,1.47e-14,53;UBERON:0002616,1.47e-14,53;UBERON:0000955,2.96e-14,68;UBERON:0006238,2.96e-14,68;UBERON:0002780,6.13e-14,41;UBERON:0001890,6.13e-14,41;UBERON:0003080,6.13e-14,41;UBERON:0006240,6.13e-14,41;UBERON:0003056,1.77e-13,61;UBERON:0010371,1.57e-10,104;UBERON:0001893,1.40e-09,34;UBERON:0003528,1.59e-09,34;UBERON:0002020,1.59e-09,34;UBERON:0010314,1.66e-09,132;UBERON:0002791,1.41e-08,32;UBERON:0011216,1.79e-08,223;UBERON:0005162,2.95e-07,2;UBERON:0000122,2.95e-07,2;UBERON:0002784,3.83e-07,4;UBERON:0003714,3.98e-07,2;UBERON:0001869,4.68e-07,32;UBERON:0001897,5.04e-07,2;UBERON:0010225,5.04e-07,2;UBERON:0002619,5.54e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0.665188192387692,0.614843499851882,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,1.06729878806013,1.00416183829401,0.402829317109147,0.760272105718513,1.22031028774085,0.367663080345869,0.81014194788176,0.535798369704479,0.898117490504679,0.788280363383256,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0.269421344139376,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1525 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2559 | |||
|TSSclassifier=S | |||
|UniProt=P78310 | |||
|association_with_transcript=-29bp_to_uc002ykh.1,uc002yki.2,uc010gld.1,uc010gle.1_5end | |||
|description=CAGE_peak_2_at_CXADR_5end | |||
|id=chr21:18885287..18885300,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.34e-12!254;CL:0000047!3.53e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;7.52e-12;6!CL:0000404;7.52e-12;6!CL:0002322;1.81e-09;5!CL:0000039;4.95e-07;7!CL:0000586;4.95e-07;7!CL:0002319;7.65e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.19e-16,8;CL:0000540,6.21e-12,6;CL:0000031,6.21e-12,6;CL:0000404,6.21e-12,6;CL:0002322,1.46e-09,5;CL:0000039,3.47e-07,7;CL:0000586,3.47e-07,7;CL:0002319,7.32e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;7.52e-12;6 | |||
|ontology_enrichment_disease=DOID:0050687!7.75e-14!143;DOID:305!4.00e-12!106;DOID:162!5.83e-09!235;DOID:14566!1.44e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;2.68e-11;41!UBERON:0001890;2.68e-11;41!UBERON:0001017;5.07e-10;75!UBERON:0000922;1.30e-09;49!UBERON:0001016;8.44e-09;83!UBERON:0001893;4.55e-08;34!UBERON:0003528;7.33e-08;34!UBERON:0002020;7.33e-08;34!UBERON:0002791;7.44e-08;32!UBERON:0000073;1.37e-07;53!UBERON:0002616;1.37e-07;53!UBERON:0005162;2.59e-07;2!UBERON:0000122;2.59e-07;2!UBERON:0000955;4.92e-07;68!UBERON:0002784;5.26e-07;4!UBERON:0001869;5.47e-07;32!UBERON:0002619;5.53e-07;22!UBERON:0003714;6.60e-07;2!UBERON:0001897;7.30e-07;2!UBERON:0010225;7.30e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.82e-27,89;UBERON:0001017,5.31e-27,81;UBERON:0001049,5.48e-17,56;UBERON:0005068,5.48e-17,56;UBERON:0006241,5.48e-17,56;UBERON:0007135,5.48e-17,56;UBERON:0002346,2.13e-15,86;UBERON:0003075,5.11e-15,82;UBERON:0007284,5.11e-15,82;UBERON:0004121,9.70e-15,171;UBERON:0000924,9.70e-15,171;UBERON:0006601,9.70e-15,171;UBERON:0000073,1.47e-14,53;UBERON:0002616,1.47e-14,53;UBERON:0000955,2.96e-14,68;UBERON:0006238,2.96e-14,68;UBERON:0002780,6.13e-14,41;UBERON:0001890,6.13e-14,41;UBERON:0003080,6.13e-14,41;UBERON:0006240,6.13e-14,41;UBERON:0003056,1.77e-13,61;UBERON:0010371,1.57e-10,104;UBERON:0001893,1.40e-09,34;UBERON:0003528,1.59e-09,34;UBERON:0002020,1.59e-09,34;UBERON:0010314,1.66e-09,132;UBERON:0002791,1.41e-08,32;UBERON:0011216,1.79e-08,223;UBERON:0005162,2.95e-07,2;UBERON:0000122,2.95e-07,2;UBERON:0002784,3.83e-07,4;UBERON:0003714,3.98e-07,2;UBERON:0001869,4.68e-07,32;UBERON:0001897,5.04e-07,2;UBERON:0010225,5.04e-07,2;UBERON:0002619,5.54e-07,22 | |||
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| |||
|short_description=p2@CXADR | |||
}} |
Revision as of 09:52, 12 September 2013
Short description: | p2@CXADR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CXADR_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_uc002ykh.1, uc002yki.2, uc010gld.1, uc010gle.1_5end |
EntrezGene: | CXADR |
HGNC: | 2559 |
UniProt: | P78310 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.19e-16 | 8 |
neuron | 6.21e-12 | 6 |
neuroblast | 6.21e-12 | 6 |
electrically signaling cell | 6.21e-12 | 6 |
embryonic stem cell | 1.46e-09 | 5 |
germ line cell | 3.47e-07 | 7 |
germ cell | 3.47e-07 | 7 |
neural cell | 7.32e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.