FFCP PHASE1:Hg19::chr2:146508457..146508461,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr2:146508457..146508461,-|id=chr2:146508457..146508461,-|ontology_enrichment_celltype=CL:0002057!8.64e-80!42;CL:0000860!3.70e-74!45;CL:0000766!2.93e-57!76;CL:0002194!3.24e-55!63;CL:0000576!3.24e-55!63;CL:0000040!3.24e-55!63;CL:0000559!3.24e-55!63;CL:0002009!2.14e-53!65;CL:0000839!2.72e-49!70;CL:0000557!1.54e-48!71;CL:0000763!2.32e-37!112;CL:0000049!2.32e-37!112;CL:0000738!1.11e-33!140;CL:0002087!4.07e-32!119;CL:0002031!3.59e-28!124;CL:0000037!1.91e-26!172;CL:0000566!1.91e-26!172;CL:0002032!1.04e-25!165;CL:0000837!1.04e-25!165;CL:0000988!1.06e-24!182;CL:0000767!1.53e-18!3;CL:0002393!5.19e-11!9;CL:0002397!5.19e-11!9;CL:0000134!7.73e-10!358;CL:0002320!1.54e-09!365;CL:0000219!1.73e-08!390;CL:0000048!4.54e-08!430;CL:0000723!7.07e-08!436;CL:0002591!9.71e-08!1;CL:0000034!1.25e-07!444;CL:0000094!2.87e-07!8|ontology_enrichment_celltype_v019=CL:0000860;4.36e-28;33!CL:0002057;4.36e-28;33!CL:0000473;9.57e-23;39!CL:0000234;9.57e-23;39!CL:0000576;6.06e-22;48!CL:0002591;5.16e-21;1!CL:0002393;3.97e-14;6!CL:0002397;3.97e-14;6!CL:0000766;1.15e-12;69!CL:0002087;9.97e-09;104!CL:0000763;5.65e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,1.08e-37,42;CL:0002057,1.08e-37,42;CL:0000473,5.86e-33,48;CL:0000234,5.86e-33,48;CL:0002194,2.54e-26,59;CL:0000576,2.54e-26,59;CL:0000040,2.54e-26,59;CL:0000559,2.54e-26,59;CL:0002009,1.83e-25,61;CL:0000839,1.52e-23,66;CL:0000557,3.40e-23,67;CL:0000766,1.38e-21,72;CL:0002591,5.16e-21,1;CL:0000763,2.43e-14,108;CL:0000049,2.43e-14,108;CL:0002087,1.89e-13,115;CL:0002031,7.07e-13,120;CL:0000738,2.55e-11,136;CL:0002393,1.15e-09,9;CL:0002397,1.15e-09,9;CL:0002032,1.69e-09,161;CL:0000837,1.69e-09,161;CL:0000037,4.41e-09,168;CL:0000988,1.35e-08,177|ontology_enrichment_development_v019=CL:0002057;1.82e-27;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.33e-42!80;UBERON:0001474!2.52e-39!86;UBERON:0002390!2.91e-38!102;UBERON:0003061!2.91e-38!102;UBERON:0002193!2.02e-34!112;UBERON:0004765!8.14e-33!101;UBERON:0001434!8.14e-33!101;UBERON:0002405!9.55e-31!115;UBERON:0002204!9.45e-20!167;UBERON:0003081!6.54e-17!216;UBERON:0002384!3.92e-09!375|ontology_enrichment_uberon_v019=UBERON:0000078;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0008886;3.34e-11;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.89e-20,76;UBERON:0001474,6.01e-19,82;UBERON:0004765,2.98e-17,90;UBERON:0002405,1.09e-16,93;UBERON:0002390,7.91e-16,98;UBERON:0003061,7.91e-16,98;UBERON:0001434,1.66e-15,100;UBERON:0002193,2.43e-14,108;UBERON:0002204,2.30e-11,167;UBERON:0000078,3.35e-11,2;UBERON:0007497,3.35e-11,2;UBERON:0003643,3.35e-11,2;UBERON:0003504,3.35e-11,2;UBERON:0003469,3.35e-11,2;UBERON:0003496,3.35e-11,2;UBERON:0002012,3.35e-11,2;UBERON:0008886,3.35e-11,2;UBERON:0007303,3.35e-11,2;UBERON:0002061,3.35e-11,2;UBERON:0005432,3.35e-11,2;UBERON:0004363,3.35e-11,2;UBERON:0003081,2.88e-09,203;UBERON:0004145,6.78e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0.0774672005803016,0,0,1.10799081706375,0.200544447470142,1.08505435357926,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0.619412741790207,0.575384784644301,0.768482119587302,3.31075121844019,0.689491361473237,2.5819387343353,2.70852973188684,0,0,0.224723484445085,1.22433556948361,0.962787081228281,1.27867425159808,0,0,0,1.16083695451434,0.56738522469114,0.622822248995575,0.75374599577023,0.521482918420201,1.08594422352558,0,0,0.949387162322653,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr2:146508457..146508461,- | |||
|id=chr2:146508457..146508461,- | |||
|ontology_enrichment_celltype=CL:0002057!8.64e-80!42;CL:0000860!3.70e-74!45;CL:0000766!2.93e-57!76;CL:0002194!3.24e-55!63;CL:0000576!3.24e-55!63;CL:0000040!3.24e-55!63;CL:0000559!3.24e-55!63;CL:0002009!2.14e-53!65;CL:0000839!2.72e-49!70;CL:0000557!1.54e-48!71;CL:0000763!2.32e-37!112;CL:0000049!2.32e-37!112;CL:0000738!1.11e-33!140;CL:0002087!4.07e-32!119;CL:0002031!3.59e-28!124;CL:0000037!1.91e-26!172;CL:0000566!1.91e-26!172;CL:0002032!1.04e-25!165;CL:0000837!1.04e-25!165;CL:0000988!1.06e-24!182;CL:0000767!1.53e-18!3;CL:0002393!5.19e-11!9;CL:0002397!5.19e-11!9;CL:0000134!7.73e-10!358;CL:0002320!1.54e-09!365;CL:0000219!1.73e-08!390;CL:0000048!4.54e-08!430;CL:0000723!7.07e-08!436;CL:0002591!9.71e-08!1;CL:0000034!1.25e-07!444;CL:0000094!2.87e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.36e-28;33!CL:0002057;4.36e-28;33!CL:0000473;9.57e-23;39!CL:0000234;9.57e-23;39!CL:0000576;6.06e-22;48!CL:0002591;5.16e-21;1!CL:0002393;3.97e-14;6!CL:0002397;3.97e-14;6!CL:0000766;1.15e-12;69!CL:0002087;9.97e-09;104!CL:0000763;5.65e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.08e-37,42;CL:0002057,1.08e-37,42;CL:0000473,5.86e-33,48;CL:0000234,5.86e-33,48;CL:0002194,2.54e-26,59;CL:0000576,2.54e-26,59;CL:0000040,2.54e-26,59;CL:0000559,2.54e-26,59;CL:0002009,1.83e-25,61;CL:0000839,1.52e-23,66;CL:0000557,3.40e-23,67;CL:0000766,1.38e-21,72;CL:0002591,5.16e-21,1;CL:0000763,2.43e-14,108;CL:0000049,2.43e-14,108;CL:0002087,1.89e-13,115;CL:0002031,7.07e-13,120;CL:0000738,2.55e-11,136;CL:0002393,1.15e-09,9;CL:0002397,1.15e-09,9;CL:0002032,1.69e-09,161;CL:0000837,1.69e-09,161;CL:0000037,4.41e-09,168;CL:0000988,1.35e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.82e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.33e-42!80;UBERON:0001474!2.52e-39!86;UBERON:0002390!2.91e-38!102;UBERON:0003061!2.91e-38!102;UBERON:0002193!2.02e-34!112;UBERON:0004765!8.14e-33!101;UBERON:0001434!8.14e-33!101;UBERON:0002405!9.55e-31!115;UBERON:0002204!9.45e-20!167;UBERON:0003081!6.54e-17!216;UBERON:0002384!3.92e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0008886;3.34e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.89e-20,76;UBERON:0001474,6.01e-19,82;UBERON:0004765,2.98e-17,90;UBERON:0002405,1.09e-16,93;UBERON:0002390,7.91e-16,98;UBERON:0003061,7.91e-16,98;UBERON:0001434,1.66e-15,100;UBERON:0002193,2.43e-14,108;UBERON:0002204,2.30e-11,167;UBERON:0000078,3.35e-11,2;UBERON:0007497,3.35e-11,2;UBERON:0003643,3.35e-11,2;UBERON:0003504,3.35e-11,2;UBERON:0003469,3.35e-11,2;UBERON:0003496,3.35e-11,2;UBERON:0002012,3.35e-11,2;UBERON:0008886,3.35e-11,2;UBERON:0007303,3.35e-11,2;UBERON:0002061,3.35e-11,2;UBERON:0005432,3.35e-11,2;UBERON:0004363,3.35e-11,2;UBERON:0003081,2.88e-09,203;UBERON:0004145,6.78e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0.0774672005803016,0,0,1.10799081706375,0.200544447470142,1.08505435357926,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0.619412741790207,0.575384784644301,0.768482119587302,3.31075121844019,0.689491361473237,2.5819387343353,2.70852973188684,0,0,0.224723484445085,1.22433556948361,0.962787081228281,1.27867425159808,0,0,0,1.16083695451434,0.56738522469114,0.622822248995575,0.75374599577023,0.521482918420201,1.08594422352558,0,0,0.949387162322653,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:146508457..146508461,- | |||
}} |
Revision as of 13:53, 12 September 2013
Short description: | p@chr2:146508457..146508461, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:146508457..146508461, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.08e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-37 | 42 |
defensive cell | 5.86e-33 | 48 |
phagocyte | 5.86e-33 | 48 |
monopoietic cell | 2.54e-26 | 59 |
monocyte | 2.54e-26 | 59 |
monoblast | 2.54e-26 | 59 |
promonocyte | 2.54e-26 | 59 |
macrophage dendritic cell progenitor | 1.83e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.52e-23 | 66 |
granulocyte monocyte progenitor cell | 3.40e-23 | 67 |
myeloid leukocyte | 1.38e-21 | 72 |
smooth muscle cell of the pulmonary artery | 5.16e-21 | 1 |
myeloid cell | 2.43e-14 | 108 |
common myeloid progenitor | 2.43e-14 | 108 |
nongranular leukocyte | 1.89e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 7.07e-13 | 120 |
leukocyte | 2.55e-11 | 136 |
intermediate monocyte | 1.15e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.15e-09 | 9 |
hematopoietic oligopotent progenitor cell | 1.69e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-09 | 161 |
hematopoietic stem cell | 4.41e-09 | 168 |
hematopoietic cell | 1.35e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.89e-20 | 76 |
bone element | 6.01e-19 | 82 |
skeletal element | 2.98e-17 | 90 |
immune system | 1.09e-16 | 93 |
hematopoietic system | 7.91e-16 | 98 |
blood island | 7.91e-16 | 98 |
skeletal system | 1.66e-15 | 100 |
hemolymphoid system | 2.43e-14 | 108 |
musculoskeletal system | 2.30e-11 | 167 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.35e-11 | 2 |
developing epithelial placode | 3.35e-11 | 2 |
respiratory system arterial blood vessel | 3.35e-11 | 2 |
respiratory system blood vessel | 3.35e-11 | 2 |
respiratory system artery | 3.35e-11 | 2 |
head blood vessel | 3.35e-11 | 2 |
pulmonary artery | 3.35e-11 | 2 |
pulmonary vascular system | 3.35e-11 | 2 |
pharyngeal vasculature | 3.35e-11 | 2 |
truncus arteriosus | 3.35e-11 | 2 |
aortic sac | 3.35e-11 | 2 |
pharyngeal arch artery | 3.35e-11 | 2 |
lateral plate mesoderm | 2.88e-09 | 203 |
outflow tract | 6.78e-08 | 3 |
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