FFCP PHASE1:Mm9::chr11:54381700..54381715,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=40|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:54381700..54381715,+|id=chr11:54381700..54381715,+|ontology_enrichment_celltype=CL:0000838!7.44e-09!12;CL:0000084!1.62e-08!11;CL:0000827!1.62e-08!11;CL:0000542!1.90e-08!13;CL:0000051!1.90e-08!13;CL:0000791!1.24e-07!9;CL:0000789!1.24e-07!9;CL:0002420!1.24e-07!9;CL:0002419!1.24e-07!9;CL:0000790!1.24e-07!9;CL:0000624!6.67e-07!8|ontology_enrichment_celltype_v019_2=CL:0000838,2.10e-16,12;CL:0000084,1.02e-15,11;CL:0000827,1.02e-15,11;CL:0000542,7.19e-15,13;CL:0000051,7.19e-15,13;CL:0000791,6.32e-14,9;CL:0000789,6.32e-14,9;CL:0002420,6.32e-14,9;CL:0002419,6.32e-14,9;CL:0000790,6.32e-14,9;CL:0002031,1.04e-13,25;CL:0000624,1.92e-12,8;CL:0000738,1.47e-10,17;CL:0002087,1.47e-10,17;CL:0000988,1.31e-09,32;CL:0002032,1.31e-09,32;CL:0000037,1.31e-09,32;CL:0000837,1.31e-09,32;CL:0000893,1.66e-09,6;CL:0002489,1.66e-09,6;CL:0000898,1.66e-09,6;CL:0000809,1.66e-09,6;CL:0000810,1.66e-09,6;CL:0000895,1.66e-09,6;CL:0000808,1.66e-09,6;CL:0000894,1.66e-09,6;CL:0000806,1.66e-09,6;CL:0000807,1.66e-09,6;CL:0000805,1.66e-09,6;CL:0002425,1.66e-09,6;CL:0002436,1.66e-09,6;CL:0002427,1.66e-09,6;CL:0002428,1.66e-09,6;CL:0002429,1.66e-09,6;CL:0002433,1.66e-09,6;CL:0002431,1.66e-09,6;CL:0002432,1.66e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.55e-10!29;UBERON:0002193!1.58e-08!48;UBERON:0003408!3.08e-08!24;UBERON:0002370!1.16e-07!23;UBERON:0000974!1.16e-07!23;UBERON:0004807!1.16e-07!23;UBERON:0005058!1.16e-07!23;UBERON:0003351!1.16e-07!23;UBERON:0009113!1.16e-07!23;UBERON:0003295!1.16e-07!23;UBERON:0009722!1.16e-07!23;UBERON:0005562!1.16e-07!23;UBERON:0007690!1.16e-07!23;UBERON:0006562!1.59e-07!24;UBERON:0001557!1.59e-07!24;UBERON:0001042!1.59e-07!24;UBERON:0008814!1.59e-07!24;UBERON:0009145!1.59e-07!24;UBERON:0002390!2.56e-07!45;UBERON:0003061!2.56e-07!45;UBERON:0001004!2.74e-07!42;UBERON:0000065!8.26e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.43e-18,48;UBERON:0002405,2.43e-18,48;UBERON:0004177,1.59e-17,29;UBERON:0005057,1.59e-17,29;UBERON:0003408,7.51e-16,24;UBERON:0002390,9.81e-16,45;UBERON:0003061,9.81e-16,45;UBERON:0001004,4.57e-15,42;UBERON:0002370,1.16e-14,23;UBERON:0000974,1.16e-14,23;UBERON:0004807,1.16e-14,23;UBERON:0005058,1.16e-14,23;UBERON:0003351,1.16e-14,23;UBERON:0009113,1.16e-14,23;UBERON:0003295,1.16e-14,23;UBERON:0009722,1.16e-14,23;UBERON:0005562,1.16e-14,23;UBERON:0007690,1.16e-14,23;UBERON:0000065,4.83e-14,41;UBERON:0006562,7.70e-14,24;UBERON:0001557,7.70e-14,24;UBERON:0001042,7.70e-14,24;UBERON:0008814,7.70e-14,24;UBERON:0009145,7.70e-14,24;UBERON:0000077,2.04e-13,35;UBERON:0000072,9.60e-12,27;UBERON:0001007,7.99e-11,116;UBERON:0001555,7.99e-11,116;UBERON:0007026,7.99e-11,116;UBERON:0004119,1.90e-10,118;UBERON:0000925,1.90e-10,118;UBERON:0006595,1.90e-10,118;UBERON:0004921,7.89e-10,114;UBERON:0001041,1.29e-09,80;UBERON:0007811,8.16e-09,36;UBERON:0003081,4.99e-07,87;UBERON:0005911,5.86e-07,69|phase1_expression=0.160148847104794,0,0,0,0,0,0,206.339070859639,32.522194817035,35.577808000943,3.08192342805909,2.55270908785077,212.460105844626,218.551006047494,0.999329285446988,7.28910962603373,1.39912375625629,13.0916798623669,16.5908464662944,5.94145512517242,1.53077922271926,3.97163804803541,1.04479915655574,1.11994695955385,1.14704640533585,0.57423196411502,0,0,1.90023419456374,1.26015064879965,1.99557459589774,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.17447824240415,86.31809489935,168.046899571232,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0,0,0.367472397644862,0.0958454710182364,0,0,0.255374676170375,0,0,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0,0.151452386666368,0.0755715601067855,0.579728977403356,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.4255163915718,128.433190288997,2.82040064223167,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0.578397427679647,0,0.808834249737046,1.76673214768315,2.42437626567611,3.72783522436244,0,0.628340120440365,1.78819938646014,0.11981512450592,0,0,0.149790639404823,0,0.628271760564322,0.173824320192276,0.511430914660661,0.20778804455956,0.486723789203273,0.712875546952214,1.8661045591514,1.0108910337347,0.631325567659422,0,0,0.540186389416048,0.452114453507145,0.272145996605311,0,0.187403449119458,0,0,0.189106080167819,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.32833492815819,0.648550476366846,0.146199987425332,0,0.805238512562231,0.210289948564127,0.720332286654991,7.26921322564356,0.793351699990633,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.949058123089023,0.494096864172033,1.25667604400135,0.795825888164603,1.75467678407208,1.79763881730844,0.648414149624083,0.995706366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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:54381700..54381715,+ | |||
|id=chr11:54381700..54381715,+ | |||
|ontology_enrichment_celltype=CL:0000838!7.44e-09!12;CL:0000084!1.62e-08!11;CL:0000827!1.62e-08!11;CL:0000542!1.90e-08!13;CL:0000051!1.90e-08!13;CL:0000791!1.24e-07!9;CL:0000789!1.24e-07!9;CL:0002420!1.24e-07!9;CL:0002419!1.24e-07!9;CL:0000790!1.24e-07!9;CL:0000624!6.67e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.10e-16,12;CL:0000084,1.02e-15,11;CL:0000827,1.02e-15,11;CL:0000542,7.19e-15,13;CL:0000051,7.19e-15,13;CL:0000791,6.32e-14,9;CL:0000789,6.32e-14,9;CL:0002420,6.32e-14,9;CL:0002419,6.32e-14,9;CL:0000790,6.32e-14,9;CL:0002031,1.04e-13,25;CL:0000624,1.92e-12,8;CL:0000738,1.47e-10,17;CL:0002087,1.47e-10,17;CL:0000988,1.31e-09,32;CL:0002032,1.31e-09,32;CL:0000037,1.31e-09,32;CL:0000837,1.31e-09,32;CL:0000893,1.66e-09,6;CL:0002489,1.66e-09,6;CL:0000898,1.66e-09,6;CL:0000809,1.66e-09,6;CL:0000810,1.66e-09,6;CL:0000895,1.66e-09,6;CL:0000808,1.66e-09,6;CL:0000894,1.66e-09,6;CL:0000806,1.66e-09,6;CL:0000807,1.66e-09,6;CL:0000805,1.66e-09,6;CL:0002425,1.66e-09,6;CL:0002436,1.66e-09,6;CL:0002427,1.66e-09,6;CL:0002428,1.66e-09,6;CL:0002429,1.66e-09,6;CL:0002433,1.66e-09,6;CL:0002431,1.66e-09,6;CL:0002432,1.66e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.55e-10!29;UBERON:0002193!1.58e-08!48;UBERON:0003408!3.08e-08!24;UBERON:0002370!1.16e-07!23;UBERON:0000974!1.16e-07!23;UBERON:0004807!1.16e-07!23;UBERON:0005058!1.16e-07!23;UBERON:0003351!1.16e-07!23;UBERON:0009113!1.16e-07!23;UBERON:0003295!1.16e-07!23;UBERON:0009722!1.16e-07!23;UBERON:0005562!1.16e-07!23;UBERON:0007690!1.16e-07!23;UBERON:0006562!1.59e-07!24;UBERON:0001557!1.59e-07!24;UBERON:0001042!1.59e-07!24;UBERON:0008814!1.59e-07!24;UBERON:0009145!1.59e-07!24;UBERON:0002390!2.56e-07!45;UBERON:0003061!2.56e-07!45;UBERON:0001004!2.74e-07!42;UBERON:0000065!8.26e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.43e-18,48;UBERON:0002405,2.43e-18,48;UBERON:0004177,1.59e-17,29;UBERON:0005057,1.59e-17,29;UBERON:0003408,7.51e-16,24;UBERON:0002390,9.81e-16,45;UBERON:0003061,9.81e-16,45;UBERON:0001004,4.57e-15,42;UBERON:0002370,1.16e-14,23;UBERON:0000974,1.16e-14,23;UBERON:0004807,1.16e-14,23;UBERON:0005058,1.16e-14,23;UBERON:0003351,1.16e-14,23;UBERON:0009113,1.16e-14,23;UBERON:0003295,1.16e-14,23;UBERON:0009722,1.16e-14,23;UBERON:0005562,1.16e-14,23;UBERON:0007690,1.16e-14,23;UBERON:0000065,4.83e-14,41;UBERON:0006562,7.70e-14,24;UBERON:0001557,7.70e-14,24;UBERON:0001042,7.70e-14,24;UBERON:0008814,7.70e-14,24;UBERON:0009145,7.70e-14,24;UBERON:0000077,2.04e-13,35;UBERON:0000072,9.60e-12,27;UBERON:0001007,7.99e-11,116;UBERON:0001555,7.99e-11,116;UBERON:0007026,7.99e-11,116;UBERON:0004119,1.90e-10,118;UBERON:0000925,1.90e-10,118;UBERON:0006595,1.90e-10,118;UBERON:0004921,7.89e-10,114;UBERON:0001041,1.29e-09,80;UBERON:0007811,8.16e-09,36;UBERON:0003081,4.99e-07,87;UBERON:0005911,5.86e-07,69 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,206.339070859639,32.522194817035,35.577808000943,3.08192342805909,2.55270908785077,212.460105844626,218.551006047494,0.999329285446988,7.28910962603373,1.39912375625629,13.0916798623669,16.5908464662944,5.94145512517242,1.53077922271926,3.97163804803541,1.04479915655574,1.11994695955385,1.14704640533585,0.57423196411502,0,0,1.90023419456374,1.26015064879965,1.99557459589774,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.17447824240415,86.31809489935,168.046899571232,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0,0,0.367472397644862,0.0958454710182364,0,0,0.255374676170375,0,0,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0,0.151452386666368,0.0755715601067855,0.579728977403356,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.4255163915718,128.433190288997,2.82040064223167,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0.578397427679647,0,0.808834249737046,1.76673214768315,2.42437626567611,3.72783522436244,0,0.628340120440365,1.78819938646014,0.11981512450592,0,0,0.149790639404823,0,0.628271760564322,0.173824320192276,0.511430914660661,0.20778804455956,0.486723789203273,0.712875546952214,1.8661045591514,1.0108910337347,0.631325567659422,0,0,0.540186389416048,0.452114453507145,0.272145996605311,0,0.187403449119458,0,0,0.189106080167819,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.32833492815819,0.648550476366846,0.146199987425332,0,0.805238512562231,0.210289948564127,0.720332286654991,7.26921322564356,0.793351699990633,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.949058123089023,0.494096864172033,1.25667604400135,0.795825888164603,1.75467678407208,1.79763881730844,0.648414149624083,0.995706366271836,0,0.114248512609729,0,0,0,0,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.50925170356284,0.575392274901621,0.162135226775035,0.549122826376163,1.43768206527355,1.11642284300551,0.936113019343682,0.252578877947112,0.179397413521912,0.964887042726734,4.61882975416512,0.37898282354097,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,1.57635144106191,1.10732344824387,1.59454768657487,3.93271955317771,3.9717545829156,3.90552458170081,0,0,1.47529281905711,3.58717770196152,0.642202359951168,0.468846746368813,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0,0,0.188605079755898,0.590603785761546,0.614870295887855,0,0.727067458955011,0.712994756769443,2.52829406348653,0,0,0,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0,0,0.938686832254841,0,0,0.49465875882444,0,0.301564624640779,0.119372344003136,0.328281799490123,0.874442509889552,0.18542530201051,9.05615668228619,0.206386867963223,0.740778109478847,3.20226376907975,6.15124024744613,3.88922894451088,0,0.139951452323658,0.690999869022119,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.330613822901344,0,1.03691978633434,6.21339313086926,0,0.598066184175915,0,0.388902376688095,0.387479470433193,0.675824501963113,0.469428954583016,0.13020438484395,0.419437377702843,0,0.288030006257865,12.0084225838708,0,0.410843828659309,0.77952493786677,1.61124026100733,1.19208812868759,2.88469078847925,3.2491695978407,3.33189284828887,2.362411006305,1.71404514732629,10.3305353584138,7.02346443974405,9.70078288107022,0.226730383615211,0,0,0,0.772758376128762,0.93841237725591,0.73260649706906,0,0.501572104035363,0,1.38097570952153,0,1.20297227640581,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0,0,0.222246727801615,1.03017528619447,0,0,0,0.188626341386076,0.0936415074698824,0.384150914429216,0.229741875822453,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0,0.354951612318675,0.476872379894642,0.290692833264657,0,0.338458431566706,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,0.619747364743864,0.192906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.765153328275374,0.661774257358546,1.85494268496337 | |||
|short_description=p@chr11:54381700..54381715,+ | |||
}} |
Revision as of 19:59, 12 September 2013
Short description: | p@chr11:54381700..54381715, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:54381700..54381715, + |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.