FFCP PHASE1:Mm9::chr15:101538012..101538024,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=75|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:101538012..101538024,-|id=chr15:101538012..101538024,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.58e-08,3;CL:0002202,1.58e-08,3;CL:0000069,1.58e-08,3;CL:0002632,1.58e-08,3;CL:0002368,1.58e-08,3;CL:0000307,1.58e-08,3;CL:0000377,1.58e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.49e-12!23;UBERON:0000014!7.03e-09!5;UBERON:0001003!7.03e-09!5;UBERON:0002097!7.03e-09!5;UBERON:0002199!7.03e-09!5;UBERON:0007029!7.03e-09!5;UBERON:0007376!7.03e-09!5;UBERON:0002416!7.03e-09!5;UBERON:0007383!7.03e-09!5|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.29e-31,22;UBERON:0000014,5.07e-30,5;UBERON:0001003,5.07e-30,5;UBERON:0002097,5.07e-30,5;UBERON:0002199,5.07e-30,5;UBERON:0007029,5.07e-30,5;UBERON:0007376,5.07e-30,5;UBERON:0002416,5.07e-30,5;UBERON:0007383,5.07e-30,5;UBERON:0002102,9.04e-14,7;UBERON:0004710,9.04e-14,7;UBERON:0005419,9.04e-14,7;UBERON:0005417,9.04e-14,7;UBERON:0005729,9.04e-14,7;UBERON:0010708,4.42e-12,8;UBERON:0003126,1.58e-08,3;UBERON:0001005,1.58e-08,3;UBERON:0007196,1.58e-08,3;UBERON:0001558,1.58e-08,3;UBERON:0000026,4.00e-08,12;UBERON:0004708,4.00e-08,12;UBERON:0002101,4.00e-08,12;UBERON:0004357,4.00e-08,12;UBERON:0004347,4.00e-08,12;UBERON:0005732,4.00e-08,12;UBERON:0005733,4.00e-08,12;UBERON:0000996,1.20e-07,1;UBERON:0010707,1.64e-07,13;UBERON:0001723,3.20e-07,1;UBERON:0001033,3.20e-07,1;UBERON:0010056,3.20e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,1.5154372870785,1.01343946190039,0.505524445014783,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05220927943237,0,0,0.180062129805349,0,0.204109497453984,0.2562274405697,0,0.517406741478031,0.215567992932842,0,0,1.09597866213787,1.66828349535359,2.78601733217733,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,1.6488625294148,1.93757312035087,1.62844897306021,2.74556391207214,1.14898629821543,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.324016022465404,0.836353184057875,0.218362563746178,0.539457385539283,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,1.21635129174099,0.308132871494482,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,1.58711268530648,0,0,0,0.579568782096571,0,0,8.1459984050045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0.37456602987953,0.128050304809739,0.0574354689556133,0.476293691283074,0,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.25384382367503,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0,0.409231043169689,0.154936841185966,0.771626443924566,0.249810577937946,0.935726433781634,0.859484216193193,0.191288332068843,0.661774257358546,0|short_description=p@chr15:101538012..101538024,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=75 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:101538012..101538024,- | |||
|id=chr15:101538012..101538024,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.58e-08,3;CL:0002202,1.58e-08,3;CL:0000069,1.58e-08,3;CL:0002632,1.58e-08,3;CL:0002368,1.58e-08,3;CL:0000307,1.58e-08,3;CL:0000377,1.58e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.49e-12!23;UBERON:0000014!7.03e-09!5;UBERON:0001003!7.03e-09!5;UBERON:0002097!7.03e-09!5;UBERON:0002199!7.03e-09!5;UBERON:0007029!7.03e-09!5;UBERON:0007376!7.03e-09!5;UBERON:0002416!7.03e-09!5;UBERON:0007383!7.03e-09!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.29e-31,22;UBERON:0000014,5.07e-30,5;UBERON:0001003,5.07e-30,5;UBERON:0002097,5.07e-30,5;UBERON:0002199,5.07e-30,5;UBERON:0007029,5.07e-30,5;UBERON:0007376,5.07e-30,5;UBERON:0002416,5.07e-30,5;UBERON:0007383,5.07e-30,5;UBERON:0002102,9.04e-14,7;UBERON:0004710,9.04e-14,7;UBERON:0005419,9.04e-14,7;UBERON:0005417,9.04e-14,7;UBERON:0005729,9.04e-14,7;UBERON:0010708,4.42e-12,8;UBERON:0003126,1.58e-08,3;UBERON:0001005,1.58e-08,3;UBERON:0007196,1.58e-08,3;UBERON:0001558,1.58e-08,3;UBERON:0000026,4.00e-08,12;UBERON:0004708,4.00e-08,12;UBERON:0002101,4.00e-08,12;UBERON:0004357,4.00e-08,12;UBERON:0004347,4.00e-08,12;UBERON:0005732,4.00e-08,12;UBERON:0005733,4.00e-08,12;UBERON:0000996,1.20e-07,1;UBERON:0010707,1.64e-07,13;UBERON:0001723,3.20e-07,1;UBERON:0001033,3.20e-07,1;UBERON:0010056,3.20e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,1.5154372870785,1.01343946190039,0.505524445014783,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05220927943237,0,0,0.180062129805349,0,0.204109497453984,0.2562274405697,0,0.517406741478031,0.215567992932842,0,0,1.09597866213787,1.66828349535359,2.78601733217733,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,1.6488625294148,1.93757312035087,1.62844897306021,2.74556391207214,1.14898629821543,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.324016022465404,0.836353184057875,0.218362563746178,0.539457385539283,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,1.21635129174099,0.308132871494482,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,1.58711268530648,0,0,0,0.579568782096571,0,0,8.1459984050045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0.37456602987953,0.128050304809739,0.0574354689556133,0.476293691283074,0,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.25384382367503,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0,0.409231043169689,0.154936841185966,0.771626443924566,0.249810577937946,0.935726433781634,0.859484216193193,0.191288332068843,0.661774257358546,0 | |||
|short_description=p@chr15:101538012..101538024,- | |||
}} |
Revision as of 03:26, 13 September 2013
Short description: | p@chr15:101538012..101538024, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:101538012..101538024, - |
Coexpression cluster: | MCL_coexpression_mm9:75 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.58e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.58e-08 | 3 |
branched duct epithelial cell | 1.58e-08 | 3 |
epithelial cell of lower respiratory tract | 1.58e-08 | 3 |
respiratory epithelial cell | 1.58e-08 | 3 |
tracheal epithelial cell | 1.58e-08 | 3 |
tracheoblast | 1.58e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.29e-31 | 22 |
zone of skin | 5.07e-30 | 5 |
skin epidermis | 5.07e-30 | 5 |
skin of body | 5.07e-30 | 5 |
integument | 5.07e-30 | 5 |
surface | 5.07e-30 | 5 |
outer epithelium | 5.07e-30 | 5 |
integumental system | 5.07e-30 | 5 |
enveloping layer of ectoderm | 5.07e-30 | 5 |
forelimb | 9.04e-14 | 7 |
pectoral appendage | 9.04e-14 | 7 |
pectoral appendage bud | 9.04e-14 | 7 |
forelimb bud | 9.04e-14 | 7 |
forelimb/pectoral fin field | 9.04e-14 | 7 |
pectoral complex | 4.42e-12 | 8 |
trachea | 1.58e-08 | 3 |
respiratory airway | 1.58e-08 | 3 |
tracheobronchial tree | 1.58e-08 | 3 |
lower respiratory tract | 1.58e-08 | 3 |
appendage | 4.00e-08 | 12 |
paired limb/fin | 4.00e-08 | 12 |
limb | 4.00e-08 | 12 |
paired limb/fin bud | 4.00e-08 | 12 |
limb bud | 4.00e-08 | 12 |
limb/fin field | 4.00e-08 | 12 |
limb field | 4.00e-08 | 12 |
vagina | 1.20e-07 | 1 |
appendage girdle complex | 1.64e-07 | 13 |
tongue | 3.20e-07 | 1 |
gustatory system | 3.20e-07 | 1 |
future tongue | 3.20e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.