FFCP PHASE1:Mm9::chr16:64770972..64771010,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67609|HGNC=|MCL_coexpression_id=33|UniProt=Q3TTL0|association_with_transcript=0bp_to_ENSMUST00000076991_5end|description=CAGE_peak_2_at_4930453N24Rik_5end|id=chr16:64770972..64771010,-|ontology_enrichment_celltype=CL:0000838!7.06e-08!12;CL:0000084!2.10e-07!11;CL:0000827!2.10e-07!11;CL:0000791!3.19e-07!9;CL:0000789!3.19e-07!9;CL:0002420!3.19e-07!9;CL:0002419!3.19e-07!9;CL:0000790!3.19e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,1.10e-17,9;CL:0000789,1.10e-17,9;CL:0002420,1.10e-17,9;CL:0002419,1.10e-17,9;CL:0000790,1.10e-17,9;CL:0000624,6.71e-16,8;CL:0000838,2.00e-15,12;CL:0000084,4.36e-14,11;CL:0000827,4.36e-14,11;CL:0000542,4.70e-14,13;CL:0000051,4.70e-14,13;CL:0002031,2.36e-12,25;CL:0000738,2.86e-12,17;CL:0002087,2.86e-12,17;CL:0000893,2.98e-12,6;CL:0002489,2.98e-12,6;CL:0000898,2.98e-12,6;CL:0000809,2.98e-12,6;CL:0000810,2.98e-12,6;CL:0000895,2.98e-12,6;CL:0000808,2.98e-12,6;CL:0000894,2.98e-12,6;CL:0000806,2.98e-12,6;CL:0000807,2.98e-12,6;CL:0000805,2.98e-12,6;CL:0002425,2.98e-12,6;CL:0002436,2.98e-12,6;CL:0002427,2.98e-12,6;CL:0002428,2.98e-12,6;CL:0002429,2.98e-12,6;CL:0002433,2.98e-12,6;CL:0002431,2.98e-12,6;CL:0002432,2.98e-12,6;CL:0000988,3.59e-10,32;CL:0002032,3.59e-10,32;CL:0000037,3.59e-10,32;CL:0000837,3.59e-10,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!9.05e-12!94;UBERON:0007811!9.72e-11!86;UBERON:0003408!1.46e-08!24;UBERON:0002370!2.27e-08!23;UBERON:0000974!2.27e-08!23;UBERON:0004807!2.27e-08!23;UBERON:0005058!2.27e-08!23;UBERON:0003351!2.27e-08!23;UBERON:0009113!2.27e-08!23;UBERON:0003295!2.27e-08!23;UBERON:0009722!2.27e-08!23;UBERON:0005562!2.27e-08!23;UBERON:0007690!2.27e-08!23;UBERON:0006562!5.68e-08!24;UBERON:0001557!5.68e-08!24;UBERON:0001042!5.68e-08!24;UBERON:0008814!5.68e-08!24;UBERON:0009145!5.68e-08!24;UBERON:0000072!5.78e-08!27;UBERON:0000063!1.12e-07!35;UBERON:0001004!1.64e-07!42;UBERON:0000065!2.65e-07!41;UBERON:0004177!6.30e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.82e-22,23;UBERON:0000974,1.82e-22,23;UBERON:0004807,1.82e-22,23;UBERON:0005058,1.82e-22,23;UBERON:0003351,1.82e-22,23;UBERON:0009113,1.82e-22,23;UBERON:0003295,1.82e-22,23;UBERON:0009722,1.82e-22,23;UBERON:0005562,1.82e-22,23;UBERON:0007690,1.82e-22,23;UBERON:0006562,2.50e-21,24;UBERON:0003408,2.50e-21,24;UBERON:0001557,2.50e-21,24;UBERON:0001042,2.50e-21,24;UBERON:0008814,2.50e-21,24;UBERON:0009145,2.50e-21,24;UBERON:0000072,2.00e-18,27;UBERON:0004177,7.93e-17,29;UBERON:0005057,7.93e-17,29;UBERON:0002193,8.38e-15,48;UBERON:0002405,8.38e-15,48;UBERON:0002390,1.02e-14,45;UBERON:0003061,1.02e-14,45;UBERON:0000077,3.85e-13,35;UBERON:0007811,1.20e-12,36;UBERON:0000153,1.76e-12,43;UBERON:0000065,8.42e-12,41;UBERON:0001004,2.09e-11,42;UBERON:0003081,4.06e-07,87;UBERON:0003929,9.09e-07,55|phase1_expression=0.320297694209588,0,0,0.60492842261366,0,0,0.233612640595526,9.03863264091034,2.39340827657833,3.7450324211519,2.05461561870606,1.99430397488341,7.19043065711064,13.2004807652686,0,0.607425802169478,0.699561878128147,1.26184866143295,1.91960207048034,1.69755860719212,1.27564935226605,0.695036658406197,0.522399578277871,0.47997726838022,0,0,0,0,0.190023419456374,0.252030129759931,0,0.635030673459631,0.61506478758457,0,0,0.831173226792462,0.204169356262369,1.25559489221072,0,0.523523743973798,0,0,0.485510353031154,0.629484089877886,0.202753862439029,0.367093504323363,0.782391344348039,0,0.219686182734472,0.194429899074283,0,0,1.17447824240415,2.17608642603403,3.02484419228218,0.514518872071894,0.286533439938757,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0,0,0.311068836925433,0.675029691658453,0.210324961351382,0,0,0.61245399607477,0.575072826109418,0,1.10115880999389,0.510749352340751,0.921639199537461,0.263772575460388,0.640413505216868,1.04182674111352,0,0,0.15279824777681,0,0.569486723196412,0.931997229126503,0.151452386666368,0.377857800533928,0,0.860423876981386,0,0,0,0,0.702222100658759,0.511290967734173,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.34255163915718,1.03575153458869,0.148442139064825,0.520455980298408,0,0.461230994512117,0.301445281105245,0.587943535678524,0.125666591329675,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0,0,0.585561594023094,0.628340120440365,0.510914110417183,0.599075622529601,0,1.01656181658452,1.3481157546434,0.457500602818626,0.628271760564322,0.521472960576829,1.02286182932132,0.41557608911912,1.29793010454206,0.203678727700633,0.373220911830279,0.252722758433675,0.631325567659422,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0.646703978798527,1.13463648100692,0.351902248327898,0.657587197282725,1.39023624612799,0,0.205782136407943,0.398068533636986,0,0.51469581422943,0.284163499395593,0.414251545071004,0,0.180062061461015,0.23674473558521,0.590292695242212,0.7713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| ||
|EntrezGene=67609 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=Q3TTL0 | |||
|association_with_transcript=0bp_to_ENSMUST00000076991_5end | |||
|description=CAGE_peak_2_at_4930453N24Rik_5end | |||
|id=chr16:64770972..64771010,- | |||
|ontology_enrichment_celltype=CL:0000838!7.06e-08!12;CL:0000084!2.10e-07!11;CL:0000827!2.10e-07!11;CL:0000791!3.19e-07!9;CL:0000789!3.19e-07!9;CL:0002420!3.19e-07!9;CL:0002419!3.19e-07!9;CL:0000790!3.19e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.10e-17,9;CL:0000789,1.10e-17,9;CL:0002420,1.10e-17,9;CL:0002419,1.10e-17,9;CL:0000790,1.10e-17,9;CL:0000624,6.71e-16,8;CL:0000838,2.00e-15,12;CL:0000084,4.36e-14,11;CL:0000827,4.36e-14,11;CL:0000542,4.70e-14,13;CL:0000051,4.70e-14,13;CL:0002031,2.36e-12,25;CL:0000738,2.86e-12,17;CL:0002087,2.86e-12,17;CL:0000893,2.98e-12,6;CL:0002489,2.98e-12,6;CL:0000898,2.98e-12,6;CL:0000809,2.98e-12,6;CL:0000810,2.98e-12,6;CL:0000895,2.98e-12,6;CL:0000808,2.98e-12,6;CL:0000894,2.98e-12,6;CL:0000806,2.98e-12,6;CL:0000807,2.98e-12,6;CL:0000805,2.98e-12,6;CL:0002425,2.98e-12,6;CL:0002436,2.98e-12,6;CL:0002427,2.98e-12,6;CL:0002428,2.98e-12,6;CL:0002429,2.98e-12,6;CL:0002433,2.98e-12,6;CL:0002431,2.98e-12,6;CL:0002432,2.98e-12,6;CL:0000988,3.59e-10,32;CL:0002032,3.59e-10,32;CL:0000037,3.59e-10,32;CL:0000837,3.59e-10,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!9.05e-12!94;UBERON:0007811!9.72e-11!86;UBERON:0003408!1.46e-08!24;UBERON:0002370!2.27e-08!23;UBERON:0000974!2.27e-08!23;UBERON:0004807!2.27e-08!23;UBERON:0005058!2.27e-08!23;UBERON:0003351!2.27e-08!23;UBERON:0009113!2.27e-08!23;UBERON:0003295!2.27e-08!23;UBERON:0009722!2.27e-08!23;UBERON:0005562!2.27e-08!23;UBERON:0007690!2.27e-08!23;UBERON:0006562!5.68e-08!24;UBERON:0001557!5.68e-08!24;UBERON:0001042!5.68e-08!24;UBERON:0008814!5.68e-08!24;UBERON:0009145!5.68e-08!24;UBERON:0000072!5.78e-08!27;UBERON:0000063!1.12e-07!35;UBERON:0001004!1.64e-07!42;UBERON:0000065!2.65e-07!41;UBERON:0004177!6.30e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.82e-22,23;UBERON:0000974,1.82e-22,23;UBERON:0004807,1.82e-22,23;UBERON:0005058,1.82e-22,23;UBERON:0003351,1.82e-22,23;UBERON:0009113,1.82e-22,23;UBERON:0003295,1.82e-22,23;UBERON:0009722,1.82e-22,23;UBERON:0005562,1.82e-22,23;UBERON:0007690,1.82e-22,23;UBERON:0006562,2.50e-21,24;UBERON:0003408,2.50e-21,24;UBERON:0001557,2.50e-21,24;UBERON:0001042,2.50e-21,24;UBERON:0008814,2.50e-21,24;UBERON:0009145,2.50e-21,24;UBERON:0000072,2.00e-18,27;UBERON:0004177,7.93e-17,29;UBERON:0005057,7.93e-17,29;UBERON:0002193,8.38e-15,48;UBERON:0002405,8.38e-15,48;UBERON:0002390,1.02e-14,45;UBERON:0003061,1.02e-14,45;UBERON:0000077,3.85e-13,35;UBERON:0007811,1.20e-12,36;UBERON:0000153,1.76e-12,43;UBERON:0000065,8.42e-12,41;UBERON:0001004,2.09e-11,42;UBERON:0003081,4.06e-07,87;UBERON:0003929,9.09e-07,55 | |||
|phase1_expression=0.320297694209588,0,0,0.60492842261366,0,0,0.233612640595526,9.03863264091034,2.39340827657833,3.7450324211519,2.05461561870606,1.99430397488341,7.19043065711064,13.2004807652686,0,0.607425802169478,0.699561878128147,1.26184866143295,1.91960207048034,1.69755860719212,1.27564935226605,0.695036658406197,0.522399578277871,0.47997726838022,0,0,0,0,0.190023419456374,0.252030129759931,0,0.635030673459631,0.61506478758457,0,0,0.831173226792462,0.204169356262369,1.25559489221072,0,0.523523743973798,0,0,0.485510353031154,0.629484089877886,0.202753862439029,0.367093504323363,0.782391344348039,0,0.219686182734472,0.194429899074283,0,0,1.17447824240415,2.17608642603403,3.02484419228218,0.514518872071894,0.286533439938757,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0,0,0.311068836925433,0.675029691658453,0.210324961351382,0,0,0.61245399607477,0.575072826109418,0,1.10115880999389,0.510749352340751,0.921639199537461,0.263772575460388,0.640413505216868,1.04182674111352,0,0,0.15279824777681,0,0.569486723196412,0.931997229126503,0.151452386666368,0.377857800533928,0,0.860423876981386,0,0,0,0,0.702222100658759,0.511290967734173,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.34255163915718,1.03575153458869,0.148442139064825,0.520455980298408,0,0.461230994512117,0.301445281105245,0.587943535678524,0.125666591329675,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0,0,0.585561594023094,0.628340120440365,0.510914110417183,0.599075622529601,0,1.01656181658452,1.3481157546434,0.457500602818626,0.628271760564322,0.521472960576829,1.02286182932132,0.41557608911912,1.29793010454206,0.203678727700633,0.373220911830279,0.252722758433675,0.631325567659422,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0.646703978798527,1.13463648100692,0.351902248327898,0.657587197282725,1.39023624612799,0,0.205782136407943,0.398068533636986,0,0.51469581422943,0.284163499395593,0.414251545071004,0,0.180062061461015,0.23674473558521,0.590292695242212,0.771335564436891,0.465067889500816,0,0.116765342367169,0.16455984991348,0.32833492815819,0.56748166682099,0.292399974850665,1.09775057645525,0.671032093801859,0.841159794256509,0.823236899034275,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0,1.00534083520108,0,0.38992817423824,0.898819408654221,0.216138049874694,0.398282546508734,0.569003702859245,0.685491075658373,0,0.203651327845314,0.193952487167626,0.420814919341911,0.505892296994058,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,0.923765950833023,0.37898282354097,0.162964976442026,0.509235257325564,0.234690248288502,0.335012514883631,0.952174563544055,0.195133647857799,0.315270288212382,0.44292937929755,0,0.327726629431476,0.863424909329478,1.01254341007058,1.50791283939272,0,0.491764273019036,0,0.642202359951168,0.586058432961016,0.163934945376675,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0.963963949265421,0,0.890328018336276,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.377210159511796,0,0.614870295887855,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,0,1.02131881726136,0.36012218806262,0.646793418913773,0.428674070063185,0.177340233642274,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0.661585194164886,0.49465875882444,0.161464426695906,0.361877549568935,0.477489376012546,0.164140899745061,0,0.370850604021019,0.170870880797853,0,0.370389054739423,0.376736914009382,0.546776910884101,0.457556346413045,0.679913719975421,1.6794174278839,2.07299960706636,0,0.158167996790568,0,0.216010681643603,0.627264888043406,0.436725127492355,0.269728692769641,0.0826534557253359,0,0.129614973291793,0.621339313086926,2.81846469342095,0.448549638131936,0.496375471371293,0.388902376688095,0.387479470433193,0.675824501963113,0.234714477291508,0.2604087696879,0.314578033277133,0.241584120826006,3.16833006883652,3.79213344753814,0.405450430580328,0.308132871494482,1.16928740680016,0.895133478337407,2.78153896693771,3.24527713703916,2.80610101631697,2.1202954489111,3.35309949281999,3.32726410951574,5.55509920216589,5.48407497349878,5.72696820689688,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,0.563047426353546,0,0.214368379079066,0,1.6942555278512,1.84130094602871,2.86447756719698,0.68741272937475,0.685082519770642,0,2.02506750069542,1.80128481289688,0.906284817968409,0.51776031175182,0.31136204275253,0,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.320919209591815,0,0,0.188626341386076,0.561849044819294,0.640251524048693,0.17230640686684,0,0.463537303779422,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657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| |||
|short_description=p2@4930453N24Rik | |||
}} |
Revision as of 13:00, 13 September 2013
Short description: | p2@4930453N24Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_4930453N24Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000076991_5end |
EntrezGene: | 4930453N24Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.82e-22 | 23 |
neck | 1.82e-22 | 23 |
respiratory system epithelium | 1.82e-22 | 23 |
hemolymphoid system gland | 1.82e-22 | 23 |
pharyngeal epithelium | 1.82e-22 | 23 |
thymic region | 1.82e-22 | 23 |
pharyngeal gland | 1.82e-22 | 23 |
entire pharyngeal arch endoderm | 1.82e-22 | 23 |
thymus primordium | 1.82e-22 | 23 |
early pharyngeal endoderm | 1.82e-22 | 23 |
pharynx | 2.50e-21 | 24 |
gland of gut | 2.50e-21 | 24 |
upper respiratory tract | 2.50e-21 | 24 |
chordate pharynx | 2.50e-21 | 24 |
pharyngeal arch system | 2.50e-21 | 24 |
pharyngeal region of foregut | 2.50e-21 | 24 |
segment of respiratory tract | 2.00e-18 | 27 |
hemopoietic organ | 7.93e-17 | 29 |
immune organ | 7.93e-17 | 29 |
hemolymphoid system | 8.38e-15 | 48 |
immune system | 8.38e-15 | 48 |
hematopoietic system | 1.02e-14 | 45 |
blood island | 1.02e-14 | 45 |
mixed endoderm/mesoderm-derived structure | 3.85e-13 | 35 |
craniocervical region | 1.20e-12 | 36 |
anterior region of body | 1.76e-12 | 43 |
respiratory tract | 8.42e-12 | 41 |
respiratory system | 2.09e-11 | 42 |
lateral plate mesoderm | 4.06e-07 | 87 |
gut epithelium | 9.09e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.