FFCP PHASE1:Hg19::chr7:29519662..29519677,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1124|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1944|TSSclassifier=S|UniProt=B3VCF1|association_with_transcript=0bp_to_ENST00000424025,uc010kvj.2,uc010kvk.2,uc010kvl.2,uc010kvm.2_5end|coexpression_cluster_id=C982|description=CAGE_peak_4_at_CHN2_5end|id=chr7:29519662..29519677,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;9.35e-22;82!UBERON:0006241;7.35e-10;3!UBERON:0003057;7.35e-10;3!UBERON:0002532;7.64e-08;206!UBERON:0010316;7.64e-08;206|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.43e-82!115;UBERON:0001049!1.53e-54!57;UBERON:0005068!1.53e-54!57;UBERON:0006241!1.53e-54!57;UBERON:0007135!1.53e-54!57;UBERON:0005743!2.58e-46!86;UBERON:0000073!9.26e-46!94;UBERON:0001016!9.26e-46!94;UBERON:0003075!1.29e-44!86;UBERON:0007284!1.29e-44!86;UBERON:0002616!1.91e-44!59;UBERON:0001017!1.02e-43!82;UBERON:0000955!1.86e-43!69;UBERON:0006238!1.86e-43!69;UBERON:0002346!7.48e-42!90;UBERON:0002780!2.45e-41!41;UBERON:0001890!2.45e-41!41;UBERON:0006240!2.45e-41!41;UBERON:0003080!4.31e-40!42;UBERON:0001893!9.50e-36!34;UBERON:0002020!9.77e-36!34;UBERON:0003528!9.77e-36!34;UBERON:0002791!3.04e-34!33;UBERON:0001869!1.79e-32!32;UBERON:0003056!8.36e-31!61;UBERON:0002619!2.42e-26!22;UBERON:0001950!2.16e-23!20;UBERON:0000033!2.21e-23!123;UBERON:0000153!1.50e-22!129;UBERON:0007811!1.50e-22!129;UBERON:0000956!1.58e-22!25;UBERON:0000203!1.58e-22!25;UBERON:0004121!1.41e-19!169;UBERON:0000924!1.00e-18!173;UBERON:0006601!1.00e-18!173;UBERON:0000025!1.10e-18!194;UBERON:0002308!2.75e-15!9;UBERON:0000125!2.75e-15!9;UBERON:0003076!4.83e-15!15;UBERON:0003057!4.83e-15!15;UBERON:0002420!6.73e-15!9;UBERON:0007245!6.73e-15!9;UBERON:0010009!6.73e-15!9;UBERON:0010011!6.73e-15!9;UBERON:0000454!6.73e-15!9;UBERON:0004111!8.25e-15!241;UBERON:0000064!7.36e-13!219;UBERON:0000062!1.11e-12!511;UBERON:0000477!2.43e-12!286;UBERON:0004732!2.90e-12!13;UBERON:0009663!3.93e-12!7;UBERON:0000475!1.09e-11!365;UBERON:0000483!2.12e-11!309;UBERON:0000119!4.20e-11!312;UBERON:0002298!4.80e-11!8;UBERON:0000200!8.15e-11!6;UBERON:0004733!1.02e-10!12;UBERON:0002028!1.02e-10!12;UBERON:0007277!1.02e-10!12;UBERON:0000922!1.14e-09!612;UBERON:0000481!2.07e-09!347;UBERON:0000468!3.40e-09!659;UBERON:0000349!6.90e-09!5;UBERON:0002021!7.24e-09!5;UBERON:0000467!6.46e-08!625;UBERON:0000480!7.40e-08!626;UBERON:0001871!9.20e-08!7;UBERON:0002050!9.56e-08!605;UBERON:0005423!9.56e-08!605;UBERON:0000923!2.24e-07!604;UBERON:0005291!2.24e-07!604;UBERON:0006598!2.24e-07!604;UBERON:0002532!2.24e-07!604;UBERON:0000369!4.52e-07!4;UBERON:0002435!4.52e-07!4;UBERON:0000204!4.52e-07!4;UBERON:0010082!4.52e-07!4;UBERON:0001894!5.81e-07!7;UBERON:0006222!5.81e-07!7|ontology_enrichment_uberon_v019=UBERON:0002780;1.92e-45;41!UBERON:0001890;1.92e-45;41!UBERON:0001893;5.48e-44;34!UBERON:0003528;1.22e-42;34!UBERON:0002020;1.22e-42;34!UBERON:0001869;1.50e-41;32!UBERON:0000073;1.71e-41;53!UBERON:0002616;1.71e-41;53!UBERON:0002791;4.89e-41;32!UBERON:0002619;6.39e-38;22!UBERON:0000956;5.66e-33;25!UBERON:0000203;5.66e-33;25!UBERON:0001950;6.72e-33;20!UBERON:0001017;1.59e-29;75!UBERON:0000955;1.40e-26;68!UBERON:0001016;2.94e-23;83!UBERON:0000125;8.06e-21;9!UBERON:0002308;8.06e-21;9!UBERON:0007023;3.13e-20;114!UBERON:0002298;3.10e-18;6!UBERON:0000200;9.03e-18;6!UBERON:0004732;1.84e-17;13!UBERON:0002420;7.45e-16;9!UBERON:0007245;7.45e-16;9!UBERON:0010009;7.45e-16;9!UBERON:0010011;7.45e-16;9!UBERON:0000454;7.45e-16;9!UBERON:0009663;2.23e-15;7!UBERON:0004733;7.07e-15;12!UBERON:0002028;7.07e-15;12!UBERON:0002784;1.62e-13;4!UBERON:0001894;1.39e-11;7!UBERON:0011216;1.55e-10;132!UBERON:0002021;3.52e-10;5!UBERON:0000988;4.27e-10;3!UBERON:0002240;7.35e-10;3!UBERON:0005174;7.35e-10;3!UBERON:0001137;7.35e-10;3!UBERON:0001896;7.46e-10;3!UBERON:0005290;7.46e-10;3!UBERON:0001872;9.72e-10;5!UBERON:0000349;1.02e-09;5!UBERON:0001870;1.48e-09;3!UBERON:0002680;4.00e-08;9!UBERON:0001895;4.00e-08;9!UBERON:0001905;1.09e-07;2!UBERON:0002757;1.09e-07;2!UBERON:0010134;1.09e-07;2!UBERON:0005408;1.09e-07;2!UBERON:0001899;1.09e-07;2!UBERON:0005162;1.34e-07;2!UBERON:0000122;1.34e-07;2!UBERON:0010314;1.38e-07;132!UBERON:0001875;1.52e-07;2!UBERON:0006514;1.52e-07;2!UBERON:0001897;1.67e-07;2!UBERON:0010225;1.67e-07;2!UBERON:0002148;3.05e-07;2!UBERON:0006331;3.05e-07;2!UBERON:0009662;3.05e-07;2!UBERON:0002771;3.60e-07;2!UBERON:0001871;3.67e-07;6!UBERON:0000369;5.39e-07;4!UBERON:0002435;5.39e-07;4!UBERON:0000204;5.39e-07;4!UBERON:0002702;5.58e-07;2!UBERON:0001954;6.47e-07;2!UBERON:0003022;6.47e-07;2!UBERON:0002421;6.47e-07;2!UBERON:0002600;6.47e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.56e-84,56;UBERON:0005068,1.56e-84,56;UBERON:0006241,1.56e-84,56;UBERON:0007135,1.56e-84,56;UBERON:0000073,1.57e-76,53;UBERON:0002616,1.57e-76,53;UBERON:0007023,2.34e-72,114;UBERON:0001017,1.27e-66,81;UBERON:0000955,1.51e-66,68;UBERON:0006238,1.51e-66,68;UBERON:0001016,6.89e-65,89;UBERON:0003075,1.86e-63,82;UBERON:0007284,1.86e-63,82;UBERON:0002780,2.62e-62,41;UBERON:0001890,2.62e-62,41;UBERON:0003080,2.62e-62,41;UBERON:0006240,2.62e-62,41;UBERON:0002346,5.46e-60,86;UBERON:0001893,7.97e-52,34;UBERON:0003528,8.33e-52,34;UBERON:0002020,8.33e-52,34;UBERON:0010371,1.17e-47,104;UBERON:0002791,1.41e-46,32;UBERON:0001869,2.61e-46,32;UBERON:0003056,2.84e-45,61;UBERON:0010314,8.86e-41,132;UBERON:0002619,5.72e-38,22;UBERON:0000956,5.13e-33,25;UBERON:0000203,5.13e-33,25;UBERON:0001950,5.96e-33,20;UBERON:0004121,1.92e-31,171;UBERON:0000924,1.92e-31,171;UBERON:0006601,1.92e-31,171;UBERON:0011216,7.97e-30,223;UBERON:0000025,4.01e-24,192;UBERON:0003076,3.55e-22,15;UBERON:0003057,3.55e-22,15;UBERON:0000125,8.50e-21,9;UBERON:0002308,8.50e-21,9;UBERON:0004111,6.89e-19,240;UBERON:0002298,2.97e-18,6;UBERON:0000200,1.00e-17,6;UBERON:0004732,1.86e-17,13;UBERON:0002420,6.96e-16,9;UBERON:0007245,6.96e-16,9;UBERON:0010009,6.96e-16,9;UBERON:0010011,6.96e-16,9;UBERON:0000454,6.96e-16,9;UBERON:0009663,2.26e-15,7;UBERON:0004733,7.14e-15,12;UBERON:0002028,7.14e-15,12;UBERON:0007277,7.14e-15,12;UBERON:0002784,1.60e-13,4;UBERON:0000483,4.18e-13,306;UBERON:0000119,7.35e-13,309;UBERON:0001894,1.38e-11,7;UBERON:0006222,1.38e-11,7;UBERON:0002021,3.44e-10,5;UBERON:0000988,4.61e-10,3;UBERON:0001896,6.62e-10,3;UBERON:0005290,6.62e-10,3;UBERON:0010096,6.62e-10,3;UBERON:0002240,7.92e-10,3;UBERON:0005174,7.92e-10,3;UBERON:0001137,7.92e-10,3;UBERON:0001872,9.18e-10,5;UBERON:0000349,9.18e-10,5;UBERON:0001870,1.43e-09,3;UBERON:0002680,4.29e-08,9;UBERON:0001895,4.29e-08,9;UBERON:0010092,4.29e-08,9;UBERON:0000923,4.75e-08,560;UBERON:0010316,4.75e-08,560;UBERON:0005291,4.75e-08,560;UBERON:0006598,4.75e-08,560;UBERON:0010317,4.75e-08,560;UBERON:0002532,4.75e-08,560;UBERON:0000922,5.29e-08,592;UBERON:0002050,6.86e-08,564;UBERON:0005423,8.56e-08,581;UBERON:0001905,1.07e-07,2;UBERON:0002757,1.07e-07,2;UBERON:0010134,1.07e-07,2;UBERON:0005408,1.07e-07,2;UBERON:0001899,1.07e-07,2;UBERON:0005162,1.34e-07,2;UBERON:0000122,1.34e-07,2;UBERON:0001875,1.52e-07,2;UBERON:0006514,1.52e-07,2;UBERON:0001897,1.67e-07,2;UBERON:0010225,1.67e-07,2;UBERON:0002148,3.19e-07,2;UBERON:0006331,3.19e-07,2;UBERON:0009662,3.19e-07,2;UBERON:0001871,3.47e-07,6;UBERON:0002771,3.72e-07,2;UBERON:0000369,5.45e-07,4;UBERON:0002435,5.45e-07,4;UBERON:0000204,5.45e-07,4;UBERON:0010082,5.45e-07,4;UBERON:0002702,5.83e-07,2;UBERON:0001954,6.57e-07,2;UBERON:0003022,6.57e-07,2;UBERON:0002421,6.57e-07,2;UBERON:0002600,6.57e-07,2|phase1_expression=0,0,0.704772020479856,2.00146596706261,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,4.22468147755661,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,3.67160823029439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,5.90811548924153,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,2.90799823828566,8.99850552169957,0,0,0,0,0,0,0,0,0,0,3.54296554325536,3.25610384288601,3.05163472634166,2.76448149828062,0.886642856860642,3.72955175161753,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,1.22206028986725,0,0,0,14.9630515217103,0,13.5873378520697,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,6.10148000107438,0,0,4.87493128860266,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,9.60672461935663,37.2382630586221,0,0,0,0.558564802544508,1.3749625440701,0,0.199679000498991,0,0.446342914883745,1.14211903227435,0,0,0,0,0,0,0,2.38568906942791,10.7600690828145,0,0,0,0,0,4.00947073942963,0,1.18208560948797,0.629455057619977,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0.439656701034247,0,5.17131825446202,17.1902382265497,0,0,1.9221734262185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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |||
|TSSclassifier=S | |||
|UniProt=B3VCF1 | |||
|association_with_transcript=0bp_to_ENST00000424025,uc010kvj.2,uc010kvk.2,uc010kvl.2,uc010kvm.2_5end | |||
|coexpression_cluster_id=C982 | |||
|description=CAGE_peak_4_at_CHN2_5end | |||
|id=chr7:29519662..29519677,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.35e-22;82!UBERON:0006241;7.35e-10;3!UBERON:0003057;7.35e-10;3!UBERON:0002532;7.64e-08;206!UBERON:0010316;7.64e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@CHN2 | |||
}} |
Revision as of 00:50, 14 September 2013
Short description: | p4@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CHN2_5end |
Coexpression cluster: | C982_pineal_substantia_thalamus_globus_spinal_corpus_medulla |
Association with transcript: | 0bp_to_ENST00000424025, uc010kvj.2, uc010kvk.2, uc010kvl.2, uc010kvm.2_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | B3VCF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.