FFCP PHASE1:Hg19::chr8:35092985..35093003,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=137970|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18634|TSSclassifier=S|UniProt=Q6UXZ4|association_with_transcript=10bp_to_ENST00000404895,NM_080872,uc003xjr.1_5end|coexpression_cluster_id=C4748|description=CAGE_peak_1_at_UNC5D_5end|id=chr8:35092985..35093003,+|ontology_enrichment_celltype=CL:0000047!1.12e-10!8;CL:0000540!1.71e-08!6;CL:0000031!1.71e-08!6;CL:0000404!1.71e-08!6;CL:0002319!1.55e-07!25;CL:0002322!6.86e-07!5|ontology_enrichment_celltype_v019=CL:0000540;2.46e-11;6!CL:0000404;2.46e-11;6!CL:0002322;4.38e-09;5|ontology_enrichment_celltype_v019_2=CL:0000047,2.05e-14,8;CL:0000540,2.44e-11,6;CL:0000031,2.44e-11,6;CL:0000404,2.44e-11,6;CL:0002322,4.38e-09,5|ontology_enrichment_development_v019=CL:0000031;2.46e-11;6!UBERON:0006601;6.71e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!2.20e-61!86;UBERON:0000073!5.24e-61!94;UBERON:0001016!5.24e-61!94;UBERON:0001017!9.92e-58!82;UBERON:0001049!8.77e-49!57;UBERON:0005068!8.77e-49!57;UBERON:0006241!8.77e-49!57;UBERON:0007135!8.77e-49!57;UBERON:0003075!2.17e-47!86;UBERON:0007284!2.17e-47!86;UBERON:0002346!2.92e-47!90;UBERON:0002616!3.31e-46!59;UBERON:0000955!1.31e-44!69;UBERON:0006238!1.31e-44!69;UBERON:0000924!7.33e-42!173;UBERON:0006601!7.33e-42!173;UBERON:0004121!2.32e-41!169;UBERON:0000153!4.70e-41!129;UBERON:0007811!4.70e-41!129;UBERON:0000033!7.95e-40!123;UBERON:0002780!2.57e-39!41;UBERON:0001890!2.57e-39!41;UBERON:0006240!2.57e-39!41;UBERON:0003056!3.27e-39!61;UBERON:0003080!5.38e-38!42;UBERON:0002020!4.75e-33!34;UBERON:0003528!4.75e-33!34;UBERON:0001893!5.51e-33!34;UBERON:0002791!6.14e-32!33;UBERON:0001869!7.10e-32!32;UBERON:0007023!7.05e-28!115;UBERON:0000956!1.47e-25!25;UBERON:0000203!1.47e-25!25;UBERON:0002619!1.89e-24!22;UBERON:0001950!8.35e-23!20;UBERON:0000064!1.34e-14!219;UBERON:0000922!9.52e-14!612;UBERON:0000481!1.13e-12!347;UBERON:0003076!1.21e-11!15;UBERON:0003057!1.21e-11!15;UBERON:0000025!2.59e-11!194;UBERON:0000477!6.45e-11!286;UBERON:0000468!1.34e-10!659;UBERON:0000119!1.94e-10!312;UBERON:0002050!2.08e-10!605;UBERON:0005423!2.08e-10!605;UBERON:0000475!2.74e-10!365;UBERON:0004732!3.57e-10!13;UBERON:0000923!5.36e-10!604;UBERON:0005291!5.36e-10!604;UBERON:0006598!5.36e-10!604;UBERON:0002532!5.36e-10!604;UBERON:0000483!1.23e-09!309;UBERON:0004733!1.48e-09!12;UBERON:0002028!1.48e-09!12;UBERON:0007277!1.48e-09!12;UBERON:0001871!1.86e-09!7;UBERON:0002420!3.41e-09!9;UBERON:0007245!3.41e-09!9;UBERON:0010009!3.41e-09!9;UBERON:0010011!3.41e-09!9;UBERON:0000454!3.41e-09!9;UBERON:0007625!3.74e-09!11;UBERON:0002308!6.95e-09!9;UBERON:0000125!6.95e-09!9;UBERON:0004111!3.89e-08!241;UBERON:0000062!6.59e-08!511;UBERON:0002680!1.12e-07!9;UBERON:0001895!1.12e-07!9;UBERON:0010092!1.12e-07!9;UBERON:0001894!1.19e-07!7;UBERON:0006222!1.19e-07!7;UBERON:0000200!1.78e-07!6;UBERON:0009663!3.35e-07!7;UBERON:0000467!6.47e-07!625;UBERON:0001872!7.35e-07!5;UBERON:0000480!7.76e-07!626;UBERON:0001032!9.72e-07!24;UBERON:0004456!9.72e-07!24|ontology_enrichment_uberon_v019=UBERON:0001869;6.64e-34;32!UBERON:0002619;8.21e-34;22!UBERON:0003528;2.41e-32;34!UBERON:0002020;2.41e-32;34!UBERON:0001893;3.22e-32;34!UBERON:0002780;4.31e-32;41!UBERON:0001890;4.31e-32;41!UBERON:0002791;1.22e-31;32!UBERON:0001950;1.64e-31;20!UBERON:0000956;5.72e-29;25!UBERON:0000203;5.72e-29;25!UBERON:0000073;9.05e-27;53!UBERON:0002616;9.05e-27;53!UBERON:0001017;5.79e-23;75!UBERON:0000955;2.77e-22;68!UBERON:0001016;3.72e-20;83!UBERON:0007625;1.88e-12;11!UBERON:0000922;1.02e-11;49!UBERON:0001871;2.27e-11;6!UBERON:0002420;3.78e-10;9!UBERON:0007245;3.78e-10;9!UBERON:0010009;3.78e-10;9!UBERON:0010011;3.78e-10;9!UBERON:0000454;3.78e-10;9!UBERON:0000200;6.74e-10;6!UBERON:0000125;9.67e-10;9!UBERON:0002308;9.67e-10;9!UBERON:0011216;1.20e-09;132!UBERON:0002104;2.90e-09;21!UBERON:0001872;5.02e-09;5!UBERON:0001032;6.73e-09;24!UBERON:0004456;6.73e-09;24!UBERON:0002021;1.11e-08;5!UBERON:0000970;1.67e-08;20!UBERON:0000020;3.57e-08;23!UBERON:0000349;3.90e-08;5!UBERON:0007023;4.11e-08;114!UBERON:0001894;5.50e-08;7!UBERON:0010314;8.42e-08;132!UBERON:0000019;1.41e-07;19!UBERON:0000047;1.41e-07;19!UBERON:0004088;1.41e-07;19!UBERON:0010230;1.41e-07;19!UBERON:0003296;1.92e-07;4!UBERON:0010133;1.92e-07;4!UBERON:0009663;1.93e-07;7!UBERON:0000488;2.48e-07;4!UBERON:0000369;3.39e-07;4!UBERON:0002435;3.39e-07;4!UBERON:0000204;3.39e-07;4!UBERON:0004732;5.38e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.18e-61,81;UBERON:0001016,5.24e-59,89;UBERON:0002346,1.63e-52,86;UBERON:0003075,4.10e-52,82;UBERON:0007284,4.10e-52,82;UBERON:0003056,2.00e-49,61;UBERON:0001049,3.47e-49,56;UBERON:0005068,3.47e-49,56;UBERON:0006241,3.47e-49,56;UBERON:0007135,3.47e-49,56;UBERON:0000073,4.84e-48,53;UBERON:0002616,4.84e-48,53;UBERON:0000955,2.52e-47,68;UBERON:0006238,2.52e-47,68;UBERON:0002780,4.80e-44,41;UBERON:0001890,4.80e-44,41;UBERON:0003080,4.80e-44,41;UBERON:0006240,4.8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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=137970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18634 | |||
|TSSclassifier=S | |||
|UniProt=Q6UXZ4 | |||
|association_with_transcript=10bp_to_ENST00000404895,NM_080872,uc003xjr.1_5end | |||
|coexpression_cluster_id=C4748 | |||
|description=CAGE_peak_1_at_UNC5D_5end | |||
|id=chr8:35092985..35093003,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.12e-10!8;CL:0000540!1.71e-08!6;CL:0000031!1.71e-08!6;CL:0000404!1.71e-08!6;CL:0002319!1.55e-07!25;CL:0002322!6.86e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.46e-11;6!CL:0000404;2.46e-11;6!CL:0002322;4.38e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.05e-14,8;CL:0000540,2.44e-11,6;CL:0000031,2.44e-11,6;CL:0000404,2.44e-11,6;CL:0002322,4.38e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000031;2.46e-11;6!UBERON:0006601;6.71e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@UNC5D | |||
}} |
Revision as of 05:08, 14 September 2013
Short description: | p1@UNC5D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_UNC5D_5end |
Coexpression cluster: | C4748_parietal_occipital_brain_Neurons_temporal_small_duodenum |
Association with transcript: | 10bp_to_ENST00000404895, NM_080872, uc003xjr.1_5end |
EntrezGene: | UNC5D |
HGNC: | 18634 |
UniProt: | Q6UXZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.05e-14 | 8 |
neuron | 2.44e-11 | 6 |
neuroblast | 2.44e-11 | 6 |
electrically signaling cell | 2.44e-11 | 6 |
embryonic stem cell | 4.38e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.