FFCP PHASE1:Hg19::chr1:17906970..17906994,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25540 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCE6 | |||
|association_with_transcript=-53bp_to_ENST00000375415,NM_001011722,uc001bao.2,uc001bap.2_5end | |||
|coexpression_cluster_id=C3909 | |||
|description=CAGE_peak_5_at_ARHGEF10L_5end | |||
|id=chr1:17906970..17906994,+ | |||
|ontology_enrichment_celltype=CL:1000507!5.72e-15!12;CL:1000494!5.72e-15!12;CL:0000181!2.36e-14!12;CL:0000417!2.36e-14!12;CL:0000668!2.36e-14!12;CL:0000414!2.36e-14!12;CL:0000412!2.36e-14!12;CL:0000182!2.36e-14!12;CL:1000497!2.58e-14!18;CL:0002518!2.58e-14!18;CL:1000449!8.51e-11!16;CL:0000223!7.50e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.80e-23;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.01e-22,12;CL:0000223,2.10e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.72e-20;13!UBERON:0004161;8.94e-19;11!UBERON:0003104;1.41e-14;31!UBERON:0001041;5.49e-08;30!UBERON:0003918;8.70e-07;10!UBERON:0007687;8.70e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!6.43e-30!55;UBERON:0005173!6.43e-30!55;UBERON:0002417!2.85e-28!61;UBERON:0000916!2.85e-28!61;UBERON:0009854!1.19e-17!23;UBERON:0005057!3.21e-17!26;UBERON:0005409!7.55e-17!35;UBERON:0004921!1.30e-16!129;UBERON:0004185!1.30e-16!129;UBERON:0005177!3.37e-16!107;UBERON:0009497!6.36e-16!25;UBERON:0000015!6.36e-16!25;UBERON:0002423!6.36e-16!25;UBERON:0006235!6.36e-16!25;UBERON:0004161!6.36e-16!25;UBERON:0002107!6.55e-16!19;UBERON:0006925!6.55e-16!19;UBERON:0008836!6.55e-16!19;UBERON:0008835!6.92e-16!22;UBERON:0003894!6.92e-16!22;UBERON:0009856!3.18e-15!26;UBERON:0002113!4.42e-15!27;UBERON:0003918!4.42e-15!27;UBERON:0005095!4.42e-15!27;UBERON:0007687!4.42e-15!27;UBERON:0009773!5.72e-15!12;UBERON:0001231!5.72e-15!12;UBERON:0004810!5.72e-15!12;UBERON:0003887!4.33e-14!21;UBERON:0000489!4.60e-14!32;UBERON:0009569!1.15e-13!113;UBERON:0007499!1.29e-13!25;UBERON:0001008!1.71e-13!45;UBERON:0000160!3.20e-13!27;UBERON:0001007!3.34e-13!155;UBERON:0001555!3.34e-13!155;UBERON:0007026!3.34e-13!155;UBERON:0006555!1.37e-12!17;UBERON:0005103!1.37e-12!17;UBERON:0000083!1.37e-12!17;UBERON:0009201!1.37e-12!17;UBERON:0004819!1.37e-12!17;UBERON:0006553!1.37e-12!17;UBERON:0003074!1.37e-12!17;UBERON:0003060!1.37e-12!17;UBERON:0000466!2.94e-12!126;UBERON:0006554!3.25e-12!44;UBERON:0000080!8.91e-12!18;UBERON:0002120!8.91e-12!18;UBERON:0004875!8.91e-12!18;UBERON:0005721!8.91e-12!18;UBERON:0005754!8.91e-12!18;UBERON:0007297!8.91e-12!18;UBERON:0003929!1.32e-11!54;UBERON:0004119!2.42e-11!169;UBERON:0000925!2.42e-11!169;UBERON:0006595!2.42e-11!169;UBERON:0000058!4.18e-11!26;UBERON:0000059!7.21e-11!11;UBERON:0004211!8.51e-11!16;UBERON:0001285!8.51e-11!16;UBERON:0007684!8.51e-11!16;UBERON:0003220!8.51e-11!16;UBERON:0004208!8.51e-11!16;UBERON:0004876!2.14e-10!20;UBERON:0002368!2.59e-10!35;UBERON:0002365!2.85e-10!31;UBERON:0002330!2.85e-10!31;UBERON:0000949!5.57e-10!45;UBERON:0003064!9.14e-10!37;UBERON:0000077!3.89e-09!130;UBERON:0003886!3.90e-09!63;UBERON:0003104!6.44e-09!238;UBERON:0009142!6.44e-09!238;UBERON:0000481!6.98e-09!347;UBERON:0004907!2.00e-08!5;UBERON:0002553!8.65e-08!70;UBERON:0002530!1.07e-07!59;UBERON:0002100!2.37e-07!216;UBERON:0001046!3.54e-07!19;UBERON:0001155!3.70e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.14e-21;19!UBERON:0006925;1.14e-21;19!UBERON:0005409;5.51e-20;22!UBERON:0002423;3.72e-19;25!UBERON:0000160;1.42e-17;17!UBERON:0002365;3.11e-12;31!UBERON:0002330;3.11e-12;31!UBERON:0005172;3.46e-12;52!UBERON:0005173;3.46e-12;52!UBERON:0004921;1.42e-11;33!UBERON:0002368;1.29e-10;33!UBERON:0001007;1.52e-09;81!UBERON:0000059;3.20e-09;11!UBERON:0002417;1.55e-08;58!UBERON:0000916;1.55e-08;58!UBERON:0002108;1.89e-08;4!UBERON:0000949;7.30e-08;43!UBERON:0001155;1.72e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,7.80e-25,23;UBERON:0008835,4.21e-22,22;UBERON:0003894,4.21e-22,22;UBERON:0002107,1.15e-21,19;UBERON:0006925,1.15e-21,19;UBERON:0008836,1.15e-21,19;UBERON:0009856,1.16e-21,26;UBERON:0007499,3.62e-19,25;UBERON:0009497,3.62e-19,25;UBERON:0000015,3.62e-19,25;UBERON:0002423,3.62e-19,25;UBERON:0006235,3.62e-19,25;UBERON:0004161,3.62e-19,25;UBERON:0005172,5.48e-19,54;UBERON:0005173,5.48e-19,54;UBERON:0000160,1.46e-17,17;UBERON:0005409,2.07e-17,25;UBERON:0002417,1.10e-16,60;UBERON:0000916,1.10e-16,60;UBERON:0004921,5.80e-15,118;UBERON:0002365,1.73e-12,31;UBERON:0002330,1.73e-12,31;UBERON:0001007,3.70e-11,145;UBERON:0001555,3.70e-11,145;UBERON:0007026,3.70e-11,145;UBERON:0003929,6.49e-11,54;UBERON:0002368,7.82e-11,35;UBERON:0000949,9.37e-10,45;UBERON:0004119,1.31e-09,160;UBERON:0000925,1.31e-09,160;UBERON:0006595,1.31e-09,160;UBERON:0005177,1.44e-09,101;UBERON:0000059,3.26e-09,11;UBERON:0002108,1.89e-08,4;UBERON:0003104,1.30e-07,160;UBERON:0009142,1.30e-07,160;UBERON:0001155,1.74e-07,9;UBERON:0009569,3.65e-07,112;UBERON:0002530,7.14e-07,59;UBERON:0002113,8.31e-07,26;UBERON:0003918,8.31e-07,26;UBERON:0011143,8.31e-07,26;UBERON:0005095,8.31e-07,26;UBERON:0007687,8.31e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52164238968239,2.21671591514854,3.30585281517453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41797469938792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,32.956309053676,35.3817798003945,29.5394953340702,0,11.1919479074233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,5.55953468121462,0,0,0,0,0,0.902399225814824,0.308061348417659,0.784349769176855,2.92278449306521,0.844413031143006,0,0,0,0,0.270946437543853,0.501689773854853,1.27438136522519,0,0.447749509444357,0,0,0,0,0,6.18246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87249745670488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,1.10513566212459,20.6584853240506,0,8.24668196589166,0,0,1.61119057208048,0,0.295930216910801,0,0,0.969332746095218,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.848118428603645,0,4.97630965539252,4.77670848318032,6.72133159426988,0,0,0,0,0,0,0,0,0,1.18375320854817,15.7287930863263,0,0,0,0,0,0,0,0,9.10750547295337,0,0,0,0,4.01871336956669,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,4.46680293177729,0,23.3369197092272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8145544480199,10.0054641530174,8.15916997973548,9.90832094656518,3.24810688998671,0,0,0,0,0,0,0,0,0,0,9.53549058320298,7.71082445584472,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1724769760822,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86858885317099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9411961572633,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0.606965604236632,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0.840816489941367,5.47895232305697,1.29556554731173,1.9110067515482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,5.0163202770164,11.5836567067097,5.64380755633827,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,3.65168194123259,0,0,0,0,0,8.99345628876181,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0.0898252021065869,2.34640942403454,0,0,1.33151354837103,0,0 | |||
|short_description=p5@ARHGEF10L | |||
}} |
Revision as of 16:40, 10 January 2014
Short description: | p5@ARHGEF10L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARHGEF10L_5end |
Coexpression cluster: | C3909_Hepatocyte_gastrointestinal_signet_liver_argyrophil_pancreas_gastric |
Association with transcript: | -53bp_to_ENST00000375415, NM_001011722, uc001bao.2, uc001bap.2_5end |
EntrezGene: | ARHGEF10L |
HGNC: | 25540 |
UniProt: | Q9HCE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.01e-22 | 12 |
endodermal cell | 2.10e-08 | 58 |