FFCP PHASE1:Hg19::chr1:40865174..40865179,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2583 | |||
|description=CAGE_peak_at_chr1:40865174..40865179,+ | |||
|id=chr1:40865174..40865179,+ | |||
|ontology_enrichment_celltype=CL:0002087!4.28e-25!119;CL:0000738!1.25e-23!140;CL:0002031!3.15e-21!124;CL:0000037!1.72e-20!172;CL:0000566!1.72e-20!172;CL:0000988!5.66e-20!182;CL:0002032!2.75e-19!165;CL:0000837!2.75e-19!165;CL:0002194!3.50e-12!63;CL:0000576!3.50e-12!63;CL:0000040!3.50e-12!63;CL:0000559!3.50e-12!63;CL:0000839!1.56e-11!70;CL:0000766!1.80e-11!76;CL:0002009!2.28e-11!65;CL:0000542!2.52e-11!53;CL:0000051!2.52e-11!53;CL:0002057!6.10e-11!42;CL:0000838!6.51e-11!52;CL:0000557!1.74e-10!71;CL:0000860!1.68e-09!45;CL:0000763!4.63e-09!112;CL:0000049!4.63e-09!112;CL:0002393!4.50e-07!9;CL:0002397!4.50e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.06e-07;48!CL:0000860;1.81e-07;33!CL:0002057;1.81e-07;33!CL:0000775;5.05e-07;3!CL:0000226;7.87e-07;3!CL:0000842;7.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.30e-15,115;CL:0000738,1.53e-14,136;CL:0002031,2.16e-11,120;CL:0000988,7.50e-11,177;CL:0000037,1.23e-10,168;CL:0000766,1.90e-09,72;CL:0002032,3.42e-09,161;CL:0000837,3.42e-09,161;CL:0002194,8.51e-09,59;CL:0000576,8.51e-09,59;CL:0000040,8.51e-09,59;CL:0000559,8.51e-09,59;CL:0002009,2.00e-08,61;CL:0000860,5.10e-08,42;CL:0002057,5.10e-08,42;CL:0000839,1.34e-07,66;CL:0000557,1.89e-07,67;CL:0000775,4.99e-07,3;CL:0000226,7.68e-07,3;CL:0000842,7.68e-07,3;CL:0000473,8.67e-07,48;CL:0000234,8.67e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.49e-17!102;UBERON:0003061!7.49e-17!102;UBERON:0007023!9.16e-16!115;UBERON:0002193!7.43e-15!112;UBERON:0000178!8.83e-10!15;UBERON:0000179!8.83e-10!15;UBERON:0000463!8.83e-10!15;UBERON:0002371!8.13e-09!80;UBERON:0001474!4.24e-08!86;UBERON:0002619!1.61e-07!22;UBERON:0002020!1.81e-07!34;UBERON:0003528!1.81e-07!34;UBERON:0002405!2.95e-07!115;UBERON:0001893!3.40e-07!34;UBERON:0002791!4.46e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.64e-21;15!UBERON:0000179;1.64e-21;15!UBERON:0000463;1.64e-21;15!UBERON:0002390;7.09e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.19e-21,15;UBERON:0000179,1.19e-21,15;UBERON:0000463,1.19e-21,15;UBERON:0002390,4.09e-15,98;UBERON:0003061,4.09e-15,98;UBERON:0002193,3.00e-13,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.601633342410425,0.434021741431704,1.79132379391939,0.647787332037959,0.515151135268373,0.872389432677388,0,0.970336244751265,0.697287110717054,0.411167888021826,0,1.43846196161075,1.5369642391746,0.945928919554341,0,0,0,0,1.09162460023138,0,0.306083892370903,0,0,1.31940520074686,2.39356389145958,0.426224750532694,0.290209238628584,2.8369261234557,0,4.52247597462138,2.60741459210101,0.65156653411535,0.605399502633369,0,0,0.211255286311942,1.06302149982522,0.628975936525128,0.336985893439485,1.20141514273205,0,0.855038231223746,0.79566670879636,0.91332076882317,1.75996244461323,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,6.26134266020393,4.69789751496751,8.02773779062981,0,0,0,1.57367816091066,4.32311839024081,0.822405995998037,0.167186495390678,0.977766799900771,2.36723902867367,1.94826728407911,0.222820913770347,0.883817722424512,0.664601683750863,0,1.40900451698243,1.1705341280389,1.31550323682941,0.276350017785848,0,0.593146252648242,1.87278579662799,1.04535523804977,0.679856056185397,0,0,0.759059076058509,0,0,0,0.150575119077773,0,1.24930726552346,0.473554504088034,0,0.403213486449465,1.33720097891754,0.724122019413995,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.196468613246569,0,0,0.324547393654683,1.0447784237956,0.132957960518865,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0.772921620136887,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0.882926198829301,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.862510299438069,0.385029108839245,0.76228387266739,0,0,0,0,6.74106321552464,5.9832291840805,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.48121631347465,3.01999881146064,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0.107420244868274,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,2.29391162142713,2.27858874869665,1.42939065274673,2.46817363851717,1.29694662238543,0.540031437238115,1.58625035258854,0,0,0,0.371606350251437,0.144269212976445,0.142283686696828,0.159426272728822,0,0,0.635020748171649,0,0.280797178113459,0,0,0,0,0.1605880751037,0.403599414382095,0,0,1.22896305723383,0.671028323677248,0.500547425135725,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,1.9882952955326,0.281338832821026,0.111308705022906,0,0.422250816255987,0.19924798825107,1.10513566212459,0.251932747854276,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0,1.03423011972439,0,0,0,0.120596438625408,0,0.442317039724898,0,0.219385397153973,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0.37950746544837,0.317873157960757,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,3.26173241548684,0.86494757262552,0.939797545549098,0.404406797884062,0,0,0.547364367646998,0,0.242780379534093,0,0,0.91821828489147,0.505492637027904,0.300646838828985,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0.397429223405979,0.253243183823515,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,0,0,1.05154941711726,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0.226624183040251,0.146552233678082,0,0.517131825446202,0.26446520348538,0,0,0.533937062838473,0.314408610199332,1.24271716604159,0.496166021811951,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0,0.221858103073705,0.124192805882767,0,0,0,0,0.470531639396343,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0.276516872303462,0,0.132864840313363,0.817826971279221,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0.212574920101683,0.247871528518004,0,0,0.0788617450012534,0,0,0.3062454773532,0.192687675289379,0,0.957803154342908,1.02558182120378,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0.261906694481422,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.126831620387814,1.09394961803644,0,0.496211178389294,0.175871244359621,0,0,0,0,0.455324382702595,0,0.115233987555779,0,0.475788130837822,0.197318320688547,0,0,0.078493092850514,0,0,0.913158720509496,0.215927591218621,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0.467878926924211,0,0,0,0,0,0.231522474323834,0,0.470317296361523,0,0,0.196308467114945,0.594092800654172,0,0,0.563903507879121,0.386747327841463,0.499705779624645,0,0,0,0,0,1.00337708206016,0.315543124386369,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0,0,0.20686599172379,0.426467963801962,0.23806443146374,0.0645889098360061,0.869046000142011,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0.471464371102113,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr1:40865174..40865179,+ | |||
}} |
Revision as of 18:04, 10 January 2014
Short description: | p@chr1:40865174..40865179, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:40865174..40865179, + |
Coexpression cluster: | C2583_CD19_Neutrophils_CD14_Peripheral_Whole_CD4_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 5.30e-15 | 115 |
leukocyte | 1.53e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 2.16e-11 | 120 |
hematopoietic cell | 7.50e-11 | 177 |
hematopoietic stem cell | 1.23e-10 | 168 |
myeloid leukocyte | 1.90e-09 | 72 |
hematopoietic oligopotent progenitor cell | 3.42e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.42e-09 | 161 |
monopoietic cell | 8.51e-09 | 59 |
monocyte | 8.51e-09 | 59 |
monoblast | 8.51e-09 | 59 |
promonocyte | 8.51e-09 | 59 |
macrophage dendritic cell progenitor | 2.00e-08 | 61 |
classical monocyte | 5.10e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.10e-08 | 42 |
myeloid lineage restricted progenitor cell | 1.34e-07 | 66 |
granulocyte monocyte progenitor cell | 1.89e-07 | 67 |
neutrophil | 4.99e-07 | 3 |
single nucleate cell | 7.68e-07 | 3 |
mononuclear cell | 7.68e-07 | 3 |
defensive cell | 8.67e-07 | 48 |
phagocyte | 8.67e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
blood | 1.19e-21 | 15 |
haemolymphatic fluid | 1.19e-21 | 15 |
organism substance | 1.19e-21 | 15 |
hematopoietic system | 4.09e-15 | 98 |
blood island | 4.09e-15 | 98 |
hemolymphoid system | 3.00e-13 | 108 |