FFCP PHASE1:Hg19::chr1:153917673..153917697,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9909 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29044 | |||
|TSSclassifier=strong | |||
|UniProt=E9PAK5 | |||
|association_with_transcript=47bp_to_ENST00000368646_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_DENND4B_5end | |||
|id=chr1:153917673..153917697,- | |||
|ontology_enrichment_celltype=CL:0000037!3.09e-75!172;CL:0000566!3.09e-75!172;CL:0000988!8.84e-72!182;CL:0002032!1.78e-70!165;CL:0000837!1.78e-70!165;CL:0000738!8.48e-65!140;CL:0002087!4.27e-56!119;CL:0000763!3.11e-54!112;CL:0000049!3.11e-54!112;CL:0002031!4.87e-53!124;CL:0000766!9.54e-48!76;CL:0000557!3.75e-42!71;CL:0002009!1.67e-41!65;CL:0002194!6.87e-41!63;CL:0000576!6.87e-41!63;CL:0000040!6.87e-41!63;CL:0000559!6.87e-41!63;CL:0000839!4.59e-39!70;CL:0002057!2.24e-36!42;CL:0000860!1.80e-32!45;CL:0000542!7.16e-14!53;CL:0000051!7.16e-14!53;CL:0000838!1.79e-13!52;CL:0000134!1.76e-12!358;CL:0002320!2.18e-11!365;CL:0002393!1.26e-09!9;CL:0002397!1.26e-09!9;CL:0000219!2.43e-08!390;CL:0000094!9.84e-08!8;CL:0000945!2.20e-07!24;CL:0000826!2.20e-07!24;CL:0000791!9.06e-07!18;CL:0000789!9.06e-07!18;CL:0002420!9.06e-07!18;CL:0002419!9.06e-07!18;CL:0000790!9.06e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.84e-38;33!CL:0002057;6.84e-38;33!CL:0000576;1.44e-37;48!CL:0000473;2.70e-37;39!CL:0000234;2.70e-37;39!CL:0000766;4.26e-31;69!CL:0000763;1.15e-24;100!CL:0002087;2.51e-19;104!CL:0000738;6.17e-18;136!CL:0000988;1.99e-14;177!CL:0000094;8.60e-11;8!CL:0000791;4.73e-10;18!CL:0000789;4.73e-10;18!CL:0002419;4.73e-10;18!CL:0002393;1.57e-09;6!CL:0002397;1.57e-09;6!CL:0000236;3.94e-09;13!CL:0000235;4.67e-08;6!CL:0000219;1.29e-07;193!CL:0000081;2.76e-07;11!CL:0000542;6.31e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.57e-90,168;CL:0002032,5.09e-86,161;CL:0000837,5.09e-86,161;CL:0000988,5.68e-84,177;CL:0000738,7.32e-81,136;CL:0000766,1.48e-76,72;CL:0000763,3.08e-76,108;CL:0000049,3.08e-76,108;CL:0002087,1.41e-74,115;CL:0002194,5.04e-69,59;CL:0000576,5.04e-69,59;CL:0000040,5.04e-69,59;CL:0000559,5.04e-69,59;CL:0002031,4.56e-66,120;CL:0002009,4.70e-66,61;CL:0000557,2.90e-64,67;CL:0000839,1.21e-63,66;CL:0000473,4.89e-61,48;CL:0000234,4.89e-61,48;CL:0000860,3.34e-54,42;CL:0002057,3.34e-54,42;CL:0000134,5.93e-24,354;CL:0002320,8.48e-23,361;CL:0000219,2.43e-19,386;CL:0000048,5.81e-14,427;CL:0002393,1.02e-13,9;CL:0002397,1.02e-13,9;CL:0000034,2.09e-13,441;CL:0000723,2.59e-13,433;CL:0000542,5.80e-11,53;CL:0000051,5.80e-11,53;CL:0000094,7.16e-11,8;CL:0000838,1.82e-10,52;CL:0000791,3.50e-10,18;CL:0000789,3.50e-10,18;CL:0002420,3.50e-10,18;CL:0002419,3.50e-10,18;CL:0000790,3.50e-10,18;CL:0000236,2.68e-08,14;CL:0000235,5.03e-08,6;CL:0000081,2.44e-07,11;CL:0000625,9.53e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-38;42!CL:0000049;7.28e-22;108!CL:0000790;4.73e-10;18!CL:0000051;6.31e-07;53 | |||
|ontology_enrichment_disease=DOID:8692!5.43e-11!31;DOID:1240!1.51e-09!39;DOID:2531!3.17e-09!51;DOID:0060083!3.17e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.86e-11;31!DOID:1240;2.53e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.45e-11,31;DOID:1240,7.43e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.58e-47!112;UBERON:0002390!4.24e-47!102;UBERON:0003061!4.24e-47!102;UBERON:0002371!6.96e-36!80;UBERON:0001474!2.88e-31!86;UBERON:0002405!7.23e-29!115;UBERON:0004765!5.85e-23!101;UBERON:0001434!5.85e-23!101;UBERON:0007023!1.63e-15!115;UBERON:0003081!3.03e-14!216;UBERON:0002384!2.34e-10!375;UBERON:0000178!1.05e-09!15;UBERON:0000179!1.05e-09!15;UBERON:0000463!1.05e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.14e-10;15!UBERON:0000179;3.14e-10;15!UBERON:0000463;3.14e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.94e-63,98;UBERON:0003061,1.94e-63,98;UBERON:0002193,1.56e-56,108;UBERON:0002371,5.26e-54,76;UBERON:0001474,1.99e-48,82;UBERON:0002405,1.81e-46,93;UBERON:0004765,3.66e-42,90;UBERON:0001434,9.00e-36,100;UBERON:0003081,2.13e-22,203;UBERON:0002384,6.73e-22,371;UBERON:0002204,5.22e-14,167;UBERON:0000178,3.28e-10,15;UBERON:0000179,3.28e-10,15;UBERON:0000463,3.28e-10,15;UBERON:0000926,3.69e-07,315;UBERON:0004120,3.69e-07,315;UBERON:0006603,3.69e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.458480434487708,0.821005894499457,0.157421562627358,13.3743854128627,6.1412703695554,9.28896739896456,0,0,0,0.542270404062111,0.568676929949686,0.293600439334847,12.7418943962332,11.8321224007384,11.5015761479401,7.16529517567758,5.18229865630367,8.24241816429397,11.0502661472469,12.0920301980419,9.46077838632483,13.7133131774354,14.3908760807639,15.1756121738601,9.20615655430881,8.96562472851852,6.3850202069918,12.7555901872549,12.2642089880927,12.1883837934908,13.3652061075249,16.1014628534129,8.53949240891322,16.2224462956578,15.7255223267286,15.983428144976,9.56568770541477,9.3747919082167,8.95071976118658,7.2552309657146,9.07816359505824,11.2108004819203,9.04495194924276,10.429658368404,6.95004303056373,3.02699751316684,8.83866326370155,6.0127853613768,26.6181660753047,27.6385589954557,20.7562059053292,11.2328631146495,7.95937532059983,6.58974905458029,41.8968733299635,28.4450848394699,22.2850267592853,3.51992488922645,5.46138611262132,1.77901850772711,5.12076267079809,4.00395987036012,4.02326707968138,4.62731410949403,2.86216126360609,5.12291672198504,2.34894875748376,4.20500550937752,0,1.68152568894461,2.10707267820062,1.37696839079683,1.57204305099666,2.46721798799411,2.17342444007882,2.28145586643513,1.4203434172042,0,0.891283655081389,2.94605907474837,1.77227115666897,0.812411591295047,1.66518715643378,1.30059347559878,0.493313713811028,1.93445012450094,1.44901542867526,2.07601188426885,0.802622484269139,1.04535523804977,2.26618685395132,3.83220493601921,1.71813722741315,3.54227568827304,2.22995790026868,3.90650072313851,0,2.40920190524436,3.32765189001488,0,2.60454977248419,1.64225599384209,4.23374160771938,2.94184215361858,2.46201486600758,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.589405839739707,0,0,13.6309905334967,15.6716763569341,16.0879132227827,4.29283123749616,5.71994910780128,5.57186251994347,0.596287222100115,0,0,0,0.838998872419812,0,0.208994966536811,0.258416759169329,0.71153252537342,0.33472061276467,0.805658634218294,0,1.22031028774085,0,0,0.17859945656816,0.44905874525234,0,0,0,0,17.1314542666882,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0.570762456703795,0,0,6.64785916435973,7.25413221931637,8.02608276359133,0,0,0,0,0,0,4.43396914106349,1.40877494421162,0.414656231081544,0.288239906833923,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,4.52031382288914,8.43335757932127,0,0,0,0,0,0,0,4.13764596424047,3.88129634747131,5.77543663258868,0,0,0,0,0,9.73709131131337,8.97484377612075,7.45947924184864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78950473144085,7.54999702865159,8.4314770664721,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,4.56702848308952,3.0585488285695,4.5571774973933,4.04994018278241,3.29089818468955,7.13320642311989,8.64050299580984,4.75875105776562,0,0,0,1.48642540100575,0,0.213425530045242,0.637705090915289,4.59032554295478,3.63860203251497,18.2039281142539,2.59697552219644,1.68478306868075,5.02116293873023,0.783399478865116,2.50634477090067,2.03150133361924,3.05117342697029,3.02699560786571,0.851692475380653,2.74804275804612,2.45792611446766,2.46043718681657,2.83643540910244,2.54004524022652,0.278406173895242,0,1.08182271390393,0.99921590399346,2.81974010175699,0,2.93016358543788,0,0.222886768554957,0,0,0.296964680832639,0,0,0.140669416410513,0,0.824019371133798,0,0.398495976502139,2.21027132424918,0,0,0.615424027305347,0,0,0,1.53471711068062,0.493217028184668,7.18449277040819,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0.110579259931225,0,0.438770794307945,0,0,0.384751292518985,0,0,0,0,0,0,0,0,3.45356564069054,2.49317522850235,0,0,0.335643173951685,0,3.49660473756833,0,0,0,0,0.995261931078505,0.707660516026713,0.611030144933625,0.296521128680622,0.370691816839509,0.522109747527277,0.269604531922708,0,0,0,0,0,0,1.20990716048664,0,3.1593289814244,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,1.27746588066972,0,0,1.95497680890578,1.60412296808179,3.58936512288407,0.599037001496973,0.858452096273142,0,0.604651252380536,0,0,0,0,0,0,0.338693328263138,0.795229689809303,0.817220436669454,0,0,0,0.899895566206002,0.77380195455795,0.121499113316049,0,0.551639951094387,0.524545881349981,0,0,0,0,0,0,0,0,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| |||
|short_description=p4@DENND4B | |||
}} |
Revision as of 21:05, 10 January 2014
Short description: | p4@DENND4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DENND4B_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 47bp_to_ENST00000368646_5end |
EntrezGene: | DENND4B |
HGNC: | 29044 |
UniProt: | E9PAK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.94e-63 | 98 |
blood island | 1.94e-63 | 98 |
hemolymphoid system | 1.56e-56 | 108 |
bone marrow | 5.26e-54 | 76 |
bone element | 1.99e-48 | 82 |
immune system | 1.81e-46 | 93 |
skeletal element | 3.66e-42 | 90 |
skeletal system | 9.00e-36 | 100 |
lateral plate mesoderm | 2.13e-22 | 203 |
connective tissue | 6.73e-22 | 371 |
musculoskeletal system | 5.22e-14 | 167 |
blood | 3.28e-10 | 15 |
haemolymphatic fluid | 3.28e-10 | 15 |
organism substance | 3.28e-10 | 15 |
mesoderm | 3.69e-07 | 315 |
mesoderm-derived structure | 3.69e-07 | 315 |
presumptive mesoderm | 3.69e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.45e-11 | 31 |
leukemia | 7.43e-09 | 39 |