FFCP PHASE1:Hg19::chr15:45422041..45422052,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90527 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26507 | |||
|TSSclassifier=strong | |||
|UniProt=A8K9Q6,Q1HG43 | |||
|association_with_transcript=4bp_to_ENST00000267803,NM_144565,uc001zup.2_5end | |||
|coexpression_cluster_id=C2335 | |||
|description=CAGE_peak_2_at_DUOXA1_5end | |||
|id=chr15:45422041..45422052,- | |||
|ontology_enrichment_celltype=CL:0002076!2.06e-13!43;CL:0002368!2.66e-12!13;CL:0002159!1.68e-09!13;CL:0000223!1.89e-09!59;CL:0002202!9.44e-09!9;CL:0002632!9.44e-09!9;CL:0002328!5.06e-08!3;CL:0000349!1.98e-07!3;CL:0002577!1.98e-07!3;CL:0000066!6.97e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002328;4.67e-18;3!CL:0000244;2.53e-14;4!CL:0000731;2.53e-14;4!CL:0002202;1.70e-10;9!CL:0002632;1.70e-10;9!CL:0002621;1.44e-08;3!CL:0002368;2.67e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,2.11e-18,3;CL:0000244,2.27e-14,4;CL:0000731,2.27e-14,4;CL:0002202,1.21e-10,9;CL:0002632,1.21e-10,9;CL:0002621,1.89e-08,3;CL:0002076,1.03e-07,42;CL:0002368,2.12e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.96e-13;2!UBERON:0009143;1.44e-07;1!UBERON:0005754;2.29e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.29e-07;1!DOID:3149;2.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.09e-07,1;DOID:3149,2.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.51e-15!169;UBERON:0000925!6.51e-15!169;UBERON:0006595!6.51e-15!169;UBERON:0001004!1.95e-11!72;UBERON:0005178!5.27e-10!34;UBERON:0002224!5.27e-10!34;UBERON:0005181!1.29e-09!35;UBERON:0007196!2.36e-09!14;UBERON:0001558!2.36e-09!14;UBERON:0000065!2.82e-09!53;UBERON:0001007!3.45e-09!155;UBERON:0001555!3.45e-09!155;UBERON:0007026!3.45e-09!155;UBERON:0003135!6.59e-09!11;UBERON:0000161!7.90e-09!35;UBERON:0000464!1.01e-08!104;UBERON:0000077!1.22e-08!130;UBERON:0005631!1.54e-08!14;UBERON:0000158!1.54e-08!14;UBERON:0006947!3.67e-08!3;UBERON:0004054!3.67e-08!3;UBERON:0004815!5.06e-08!3;UBERON:0002031!5.06e-08!3;UBERON:0003101!5.24e-08!22;UBERON:0000079!5.24e-08!22;UBERON:0000365!1.13e-07!5;UBERON:0005156!2.32e-07!59;UBERON:0000990!2.32e-07!59;UBERON:0000166!5.32e-07!21;UBERON:0005911!8.74e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.72e-19;3!UBERON:0004054;6.72e-19;3!UBERON:0004815;4.67e-18;3!UBERON:0002031;4.67e-18;3!UBERON:0005904;2.59e-14;4!UBERON:0000341;4.67e-13;2!UBERON:0000486;3.26e-12;12!UBERON:0000365;1.47e-11;5!UBERON:0002185;4.70e-11;5!UBERON:0005910;1.04e-09;6!UBERON:0007196;1.85e-09;15!UBERON:0001558;1.85e-09;15!UBERON:0005178;1.96e-09;34!UBERON:0002224;1.96e-09;34!UBERON:0001723;8.85e-09;3!UBERON:0001033;8.85e-09;3!UBERON:0001949;1.44e-08;3!UBERON:0005181;1.81e-08;35!UBERON:0000485;4.96e-08;7!UBERON:0005911;8.21e-08;36!UBERON:0002171;1.02e-07;1!UBERON:0006518;1.02e-07;1!UBERON:0008949;1.02e-07;1!UBERON:0000101;1.02e-07;1!UBERON:0002167;1.02e-07;1!UBERON:0001301;1.44e-07;1!UBERON:0002372;2.29e-07;1!UBERON:0001000;2.29e-07;1!UBERON:0000998;2.29e-07;1!UBERON:0000997;2.29e-07;1!UBERON:0005056;2.29e-07;1!UBERON:0006868;2.29e-07;1!UBERON:0001961;2.29e-07;1!UBERON:0001744;2.29e-07;1!UBERON:0004176;2.29e-07;1!UBERON:0005352;2.29e-07;1!UBERON:0001042;2.29e-07;1!UBERON:0001735;2.29e-07;1!UBERON:0000165;5.13e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.11e-19,3;UBERON:0004054,9.11e-19,3;UBERON:0004815,2.11e-18,3;UBERON:0002031,2.11e-18,3;UBERON:0005904,3.25e-14,4;UBERON:0000341,3.67e-13,2;UBERON:0004119,6.90e-12,160;UBERON:0000925,6.90e-12,160;UBERON:0006595,6.90e-12,160;UBERON:0000365,1.35e-11,5;UBERON:0002185,2.94e-11,5;UBERON:0001004,7.55e-11,74;UBERON:0005178,3.92e-10,34;UBERON:0002224,3.92e-10,34;UBERON:0005181,8.27e-10,35;UBERON:0005911,9.31e-10,82;UBERON:0005910,9.63e-10,6;UBERON:0007196,1.27e-09,15;UBERON:0001558,1.27e-09,15;UBERON:0000065,3.24e-09,54;UBERON:0000166,5.33e-09,22;UBERON:0001723,1.14e-08,3;UBERON:0001033,1.14e-08,3;UBERON:0010056,1.14e-08,3;UBERON:0001949,1.89e-08,3;UBERON:0001007,3.41e-08,145;UBERON:0001555,3.41e-08,145;UBERON:0007026,3.41e-08,145;UBERON:0002171,9.91e-08,1;UBERON:0006518,9.91e-08,1;UBERON:0008949,9.91e-08,1;UBERON:0000101,9.91e-08,1;UBERON:0002167,9.91e-08,1;UBERON:0001301,1.36e-07,1;UBERON:0001041,1.52e-07,87;UBERON:0001000,2.52e-07,1;UBERON:0005352,2.52e-07,1;UBERON:0002372,2.67e-07,1;UBERON:0001961,2.67e-07,1;UBERON:0001744,2.67e-07,1;UBERON:0001735,2.67e-07,1;UBERON:0000997,2.84e-07,1;UBERON:0005056,2.84e-07,1;UBERON:0000998,3.02e-07,1;UBERON:0006868,3.02e-07,1;UBERON:0000161,4.63e-07,36;UBERON:0008947,7.37e-07,38;UBERON:0003258,7.37e-07,38;UBERON:0000072,8.14e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,1.8072355126695,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,1.48313777113772,0.97364218096405,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,1.09098448236334,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,1.1240175325762,0.201057944823262,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.708875486211932,0.268675568108545,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,1.66435439510497,0.604780586659361,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,1.65745780084613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,0,0.659006605437454,0,5.05414427002877,3.99087138183008,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.296964680832639,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0.615602068030377,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,2.36750641709634,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,2.15583274311631,0,3.4945333648406,0,0,0,0,3.20063754411784,0,0.225980740780532,0,0,0,0.782205530939212,0,0.213452994739353,0,0,0,0,0,0.372757606696298,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0952078182318,0,2.68347750079413,0,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20362237703084,0.628817220398664,5.79934677486074,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11903606175556,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.470958557103084,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0.3414369541879,2.76503864725637,0.430227358820278,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.151557396436479,0.267964130156178,0,0,2.77204176471275,2.3806443146374,0,0,0,4.7098897125842,4.85081253499726,2.61260097476354,1.02669990325584,2.22261774948139,1.86477734020959,0.99798106963804,0.0814032686109745,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | |||
|short_description=p2@DUOXA1 | |||
}} |
Revision as of 23:18, 11 January 2014
Short description: | p2@DUOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DUOXA1_5end |
Coexpression cluster: | C2335_lung_immature_thyroid_salivary_esophagus_ductus_tongue |
Association with transcript: | 4bp_to_ENST00000267803, NM_144565, uc001zup.2_5end |
EntrezGene: | DUOXA1 |
HGNC: | 26507 |
UniProt: | A8K9Q6Q1HG43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 2.11e-18 | 3 |
transitional epithelial cell | 2.27e-14 | 4 |
urothelial cell | 2.27e-14 | 4 |
epithelial cell of tracheobronchial tree | 1.21e-10 | 9 |
epithelial cell of lower respiratory tract | 1.21e-10 | 9 |
gingival epithelial cell | 1.89e-08 | 3 |
endo-epithelial cell | 1.03e-07 | 42 |
respiratory epithelial cell | 2.12e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.09e-07 | 1 |
keratoacanthoma | 2.09e-07 | 1 |