FFCP PHASE1:Hg19::chr17:7210345..7210394,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1984 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3300 | |||
|TSSclassifier=strong | |||
|UniProt=P63241,Q6IS14 | |||
|association_with_transcript=27bp_to_ENST00000336452,NM_001143760,uc002gfr.2_5end | |||
|description=CAGE_peak_7_at_EIF5A_5end | |||
|id=chr17:7210345..7210394,+ | |||
|ontology_enrichment_celltype=CL:0000988!6.66e-22!182;CL:0000037!1.90e-21!172;CL:0000566!1.90e-21!172;CL:0000738!1.78e-19!140;CL:0002032!3.44e-19!165;CL:0000837!3.44e-19!165;CL:0002031!4.16e-18!124;CL:0002087!6.92e-17!119;CL:0000557!3.47e-12!71;CL:0000763!3.96e-12!112;CL:0000049!3.96e-12!112;CL:0000839!5.71e-11!70;CL:0002057!7.79e-11!42;CL:0002009!1.23e-10!65;CL:0000945!1.30e-10!24;CL:0000826!1.30e-10!24;CL:0002194!8.50e-10!63;CL:0000576!8.50e-10!63;CL:0000040!8.50e-10!63;CL:0000559!8.50e-10!63;CL:0000860!1.05e-09!45;CL:0000766!3.69e-09!76;CL:0000236!3.42e-08!14;CL:0000542!3.07e-07!53;CL:0000051!3.07e-07!53;CL:0000838!6.21e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.99e-11;24!CL:0000236;6.46e-10;13!CL:0000576;6.12e-08;48!CL:0002087;5.70e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.27e-25,177;CL:0000037,4.55e-24,168;CL:0000738,3.10e-22,136;CL:0002032,1.41e-21,161;CL:0000837,1.41e-21,161;CL:0002031,1.24e-19,120;CL:0002087,2.40e-18,115;CL:0000763,2.52e-14,108;CL:0000049,2.52e-14,108;CL:0000557,6.61e-14,67;CL:0000839,1.78e-12,66;CL:0002009,3.45e-12,61;CL:0000766,2.20e-11,72;CL:0002194,3.06e-11,59;CL:0000576,3.06e-11,59;CL:0000040,3.06e-11,59;CL:0000559,3.06e-11,59;CL:0000945,4.55e-11,24;CL:0000826,4.55e-11,24;CL:0000473,6.20e-11,48;CL:0000234,6.20e-11,48;CL:0000860,7.06e-11,42;CL:0002057,7.06e-11,42;CL:0000236,1.76e-08,14;CL:0000542,2.78e-07,53;CL:0000051,2.78e-07,53;CL:0000838,5.86e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.94e-12!112;UBERON:0002405!1.46e-11!115;UBERON:0002371!3.39e-11!80;UBERON:0001049!3.87e-11!57;UBERON:0005068!3.87e-11!57;UBERON:0006241!3.87e-11!57;UBERON:0007135!3.87e-11!57;UBERON:0001017!5.00e-11!82;UBERON:0002390!8.13e-11!102;UBERON:0003061!8.13e-11!102;UBERON:0005743!1.50e-10!86;UBERON:0002616!8.41e-10!59;UBERON:0007023!9.21e-10!115;UBERON:0001474!2.29e-09!86;UBERON:0000955!4.24e-09!69;UBERON:0006238!4.24e-09!69;UBERON:0000073!1.07e-08!94;UBERON:0001016!1.07e-08!94;UBERON:0004765!1.54e-08!101;UBERON:0001434!1.54e-08!101;UBERON:0002346!3.28e-08!90;UBERON:0003075!7.91e-08!86;UBERON:0007284!7.91e-08!86;UBERON:0001893!1.20e-07!34;UBERON:0002020!2.00e-07!34;UBERON:0003528!2.00e-07!34;UBERON:0002791!2.71e-07!33;UBERON:0003076!3.02e-07!15;UBERON:0003057!3.02e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.04e-07;53!UBERON:0002616;5.04e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,6.45e-15,93;UBERON:0001049,4.82e-13,56;UBERON:0005068,4.82e-13,56;UBERON:0006241,4.82e-13,56;UBERON:0007135,4.82e-13,56;UBERON:0002193,1.93e-12,108;UBERON:0001017,2.76e-12,81;UBERON:0002371,2.95e-12,76;UBERON:0000073,5.67e-12,53;UBERON:0002616,5.67e-12,53;UBERON:0002390,1.14e-11,98;UBERON:0003061,1.14e-11,98;UBERON:0001016,9.60e-11,89;UBERON:0004765,1.69e-10,90;UBERON:0007023,2.00e-10,114;UBERON:0000955,2.05e-10,68;UBERON:0006238,2.05e-10,68;UBERON:0001474,4.96e-10,82;UBERON:0002346,5.85e-10,86;UBERON:0003075,1.54e-09,82;UBERON:0007284,1.54e-09,82;UBERON:0001434,9.15e-09,100;UBERON:0001893,1.26e-08,34;UBERON:0003528,2.22e-08,34;UBERON:0002020,2.22e-08,34;UBERON:0003076,1.04e-07,15;UBERON:0003057,1.04e-07,15;UBERON:0002791,1.06e-07,32;UBERON:0001869,1.35e-07,32;UBERON:0002780,1.82e-07,41;UBERON:0001890,1.82e-07,41;UBERON:0003080,1.82e-07,41;UBERON:0006240,1.82e-07,41 | |||
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| |||
|short_description=p7@EIF5A | |||
}} |
Revision as of 13:29, 20 January 2014
Short description: | p7@EIF5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EIF5A_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000336452, NM_001143760, uc002gfr.2_5end |
EntrezGene: | EIF5A |
HGNC: | 3300 |
UniProt: | P63241Q6IS14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.27e-25 | 177 |
hematopoietic stem cell | 4.55e-24 | 168 |
leukocyte | 3.10e-22 | 136 |
hematopoietic oligopotent progenitor cell | 1.41e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 1.24e-19 | 120 |
nongranular leukocyte | 2.40e-18 | 115 |
myeloid cell | 2.52e-14 | 108 |
common myeloid progenitor | 2.52e-14 | 108 |
granulocyte monocyte progenitor cell | 6.61e-14 | 67 |
myeloid lineage restricted progenitor cell | 1.78e-12 | 66 |
macrophage dendritic cell progenitor | 3.45e-12 | 61 |
myeloid leukocyte | 2.20e-11 | 72 |
monopoietic cell | 3.06e-11 | 59 |
monocyte | 3.06e-11 | 59 |
monoblast | 3.06e-11 | 59 |
promonocyte | 3.06e-11 | 59 |
lymphocyte of B lineage | 4.55e-11 | 24 |
pro-B cell | 4.55e-11 | 24 |
defensive cell | 6.20e-11 | 48 |
phagocyte | 6.20e-11 | 48 |
classical monocyte | 7.06e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.06e-11 | 42 |
B cell | 1.76e-08 | 14 |
lymphocyte | 2.78e-07 | 53 |
common lymphoid progenitor | 2.78e-07 | 53 |
lymphoid lineage restricted progenitor cell | 5.86e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
immune system | 6.45e-15 | 93 |
neural tube | 4.82e-13 | 56 |
neural rod | 4.82e-13 | 56 |
future spinal cord | 4.82e-13 | 56 |
neural keel | 4.82e-13 | 56 |
hemolymphoid system | 1.93e-12 | 108 |
central nervous system | 2.76e-12 | 81 |
bone marrow | 2.95e-12 | 76 |
regional part of nervous system | 5.67e-12 | 53 |
regional part of brain | 5.67e-12 | 53 |
hematopoietic system | 1.14e-11 | 98 |
blood island | 1.14e-11 | 98 |
nervous system | 9.60e-11 | 89 |
skeletal element | 1.69e-10 | 90 |
adult organism | 2.00e-10 | 114 |
brain | 2.05e-10 | 68 |
future brain | 2.05e-10 | 68 |
bone element | 4.96e-10 | 82 |
neurectoderm | 5.85e-10 | 86 |
neural plate | 1.54e-09 | 82 |
presumptive neural plate | 1.54e-09 | 82 |
skeletal system | 9.15e-09 | 100 |
telencephalon | 1.26e-08 | 34 |
brain grey matter | 2.22e-08 | 34 |
gray matter | 2.22e-08 | 34 |
posterior neural tube | 1.04e-07 | 15 |
chordal neural plate | 1.04e-07 | 15 |
regional part of telencephalon | 1.06e-07 | 32 |
cerebral hemisphere | 1.35e-07 | 32 |
regional part of forebrain | 1.82e-07 | 41 |
forebrain | 1.82e-07 | 41 |
anterior neural tube | 1.82e-07 | 41 |
future forebrain | 1.82e-07 | 41 |