FFCP PHASE1:Hg19::chr17:42988799..42988810,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |||
|TSSclassifier=strong | |||
|UniProt=A1L194 | |||
|association_with_transcript=-1bp_to_BC127871_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_23_at_GFAP_5end | |||
|id=chr17:42988799..42988810,- | |||
|ontology_enrichment_celltype=CL:0000128!3.33e-10!7;CL:0000126!3.33e-10!7;CL:0000127!3.33e-10!7;CL:0002453!3.33e-10!7;CL:0002605!1.48e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.16e-17;3!CL:0000128;2.27e-13;7!CL:0000126;2.27e-13;7!CL:0000127;2.27e-13;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.47e-17,3;CL:0000128,2.85e-13,7;CL:0000126,2.85e-13,7;CL:0000127,2.85e-13,7;CL:0002453,2.85e-13,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.42e-19;3!UBERON:0003057;1.42e-19;3!UBERON:0006601;8.42e-14;82!UBERON:0006222;1.74e-07;1!UBERON:0005425;5.18e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.72e-102!57;UBERON:0005068!1.72e-102!57;UBERON:0006241!1.72e-102!57;UBERON:0007135!1.72e-102!57;UBERON:0001017!3.74e-87!82;UBERON:0002616!9.34e-85!59;UBERON:0005743!1.40e-82!86;UBERON:0000073!8.26e-80!94;UBERON:0001016!8.26e-80!94;UBERON:0000955!3.10e-77!69;UBERON:0006238!3.10e-77!69;UBERON:0003075!2.84e-73!86;UBERON:0007284!2.84e-73!86;UBERON:0002780!7.99e-72!41;UBERON:0001890!7.99e-72!41;UBERON:0006240!7.99e-72!41;UBERON:0003080!6.29e-70!42;UBERON:0002346!1.76e-69!90;UBERON:0002020!1.26e-67!34;UBERON:0003528!1.26e-67!34;UBERON:0001893!2.91e-67!34;UBERON:0002791!9.66e-65!33;UBERON:0001869!1.49e-61!32;UBERON:0007023!9.79e-50!115;UBERON:0003056!1.65e-48!61;UBERON:0004121!2.52e-44!169;UBERON:0000956!9.64e-44!25;UBERON:0000203!9.64e-44!25;UBERON:0000924!5.36e-43!173;UBERON:0006601!5.36e-43!173;UBERON:0000033!1.07e-42!123;UBERON:0000153!3.63e-40!129;UBERON:0007811!3.63e-40!129;UBERON:0002619!3.75e-36!22;UBERON:0003076!2.74e-32!15;UBERON:0003057!2.74e-32!15;UBERON:0001950!6.66e-31!20;UBERON:0004732!2.84e-26!13;UBERON:0002308!1.06e-25!9;UBERON:0000125!1.06e-25!9;UBERON:0002420!5.14e-25!9;UBERON:0007245!5.14e-25!9;UBERON:0010009!5.14e-25!9;UBERON:0010011!5.14e-25!9;UBERON:0000454!5.14e-25!9;UBERON:0000025!3.57e-24!194;UBERON:0004733!1.02e-23!12;UBERON:0002028!1.02e-23!12;UBERON:0007277!1.02e-23!12;UBERON:0009663!6.15e-20!7;UBERON:0002298!6.09e-19!8;UBERON:0004111!4.51e-17!241;UBERON:0000200!1.43e-16!6;UBERON:0002680!2.26e-15!9;UBERON:0001895!2.26e-15!9;UBERON:0010092!2.26e-15!9;UBERON:0000064!2.82e-15!219;UBERON:0000349!6.85e-15!5;UBERON:0000477!3.80e-14!286;UBERON:0000483!5.91e-13!309;UBERON:0000119!1.04e-12!312;UBERON:0001871!1.74e-12!7;UBERON:0000369!1.49e-11!4;UBERON:0002435!1.49e-11!4;UBERON:0000204!1.49e-11!4;UBERON:0010082!1.49e-11!4;UBERON:0000475!4.08e-11!365;UBERON:0001896!1.44e-10!3;UBERON:0005290!1.44e-10!3;UBERON:0010096!1.44e-10!3;UBERON:0002240!1.48e-10!3;UBERON:0006331!2.49e-10!3;UBERON:0000988!3.80e-10!3;UBERON:0005174!3.91e-10!5;UBERON:0001137!3.91e-10!5;UBERON:0002771!3.12e-09!3;UBERON:0001872!3.21e-09!5;UBERON:0005383!4.63e-09!3;UBERON:0005382!4.63e-09!3;UBERON:0002037!8.71e-08!6;UBERON:0006215!8.71e-08!6;UBERON:0000481!9.01e-08!347;UBERON:0002148!1.79e-07!2;UBERON:0009662!1.79e-07!2;UBERON:0001954!2.58e-07!2;UBERON:0003022!2.58e-07!2;UBERON:0002421!2.58e-07!2;UBERON:0002600!2.58e-07!2;UBERON:0001875!2.91e-07!2;UBERON:0006514!2.91e-07!2;UBERON:0005162!3.49e-07!2;UBERON:0000122!3.49e-07!2;UBERON:0001897!3.71e-07!2;UBERON:0000062!4.05e-07!511;UBERON:0001894!5.12e-07!7;UBERON:0006222!5.12e-07!7;UBERON:0000922!5.89e-07!612;UBERON:0001873!8.71e-07!2;UBERON:0010122!8.71e-07!2;UBERON:0001876!9.23e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;8.78e-42;53!UBERON:0002616;8.78e-42;53!UBERON:0002298;1.97e-36;6!UBERON:0003528;2.82e-36;34!UBERON:0002020;2.82e-36;34!UBERON:0004732;5.40e-36;13!UBERON:0001893;3.95e-34;34!UBERON:0002780;1.29e-33;41!UBERON:0001890;1.29e-33;41!UBERON:0002791;1.48e-32;32!UBERON:0004733;3.61e-31;12!UBERON:0002028;3.61e-31;12!UBERON:0001869;1.63e-29;32!UBERON:0000955;2.28e-27;68!UBERON:0000956;1.31e-24;25!UBERON:0000203;1.31e-24;25!UBERON:0001017;7.31e-24;75!UBERON:0000125;9.12e-24;9!UBERON:0002308;9.12e-24;9!UBERON:0001016;6.32e-22;83!UBERON:0002240;1.42e-19;3!UBERON:0005174;1.42e-19;3!UBERON:0001137;1.42e-19;3!UBERON:0001896;1.56e-19;3!UBERON:0005290;1.56e-19;3!UBERON:0000988;1.06e-18;3!UBERON:0002680;2.31e-16;9!UBERON:0001895;2.31e-16;9!UBERON:0002420;2.35e-16;9!UBERON:0007245;2.35e-16;9!UBERON:0010009;2.35e-16;9!UBERON:0010011;2.35e-16;9!UBERON:0000454;2.35e-16;9!UBERON:0002619;6.81e-15;22!UBERON:0009663;6.02e-14;7!UBERON:0002148;2.06e-13;2!UBERON:0006331;2.06e-13;2!UBERON:0009662;2.06e-13;2!UBERON:0001954;4.14e-13;2!UBERON:0003022;4.14e-13;2!UBERON:0002421;4.14e-13;2!UBERON:0002600;4.14e-13;2!UBERON:0001875;6.31e-13;2!UBERON:0006514;6.31e-13;2!UBERON:0007023;6.94e-13;114!UBERON:0005162;8.02e-13;2!UBERON:0000122;8.02e-13;2!UBERON:0001897;1.22e-12;2!UBERON:0010225;1.22e-12;2!UBERON:0000349;2.93e-11;5!UBERON:0002021;8.05e-11;5!UBERON:0011216;2.56e-09;132!UBERON:0001950;3.03e-09;20!UBERON:0001894;3.56e-08;7!UBERON:0002336;1.74e-07;1!UBERON:0002038;1.74e-07;1!UBERON:0011215;1.74e-07;1!UBERON:0001018;1.74e-07;1!UBERON:0009661;1.74e-07;1!UBERON:0002950;1.74e-07;1!UBERON:0002473;1.74e-07;1!UBERON:0005340;1.74e-07;1!UBERON:0003544;1.74e-07;1!UBERON:0005970;1.74e-07;1!UBERON:0002316;1.74e-07;1!UBERON:0001020;1.74e-07;1!UBERON:0001891;1.74e-07;1!UBERON:0002437;1.74e-07;1!UBERON:0003112;2.67e-07;1!UBERON:0011158;2.67e-07;1!UBERON:0003128;2.67e-07;1!UBERON:0001703;2.67e-07;1!UBERON:0002241;2.67e-07;1!UBERON:0002902;5.18e-07;1!UBERON:0000941;5.18e-07;1!UBERON:0001785;5.18e-07;1!UBERON:0002464;5.18e-07;1!UBERON:0004904;5.18e-07;1!UBERON:0001021;5.18e-07;1!UBERON:0009899;5.18e-07;1!UBERON:0002784;9.65e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.15e-88,56;UBERON:0005068,4.15e-88,56;UBERON:0006241,4.15e-88,56;UBERON:0007135,4.15e-88,56;UBERON:0000073,2.94e-74,53;UBERON:0002616,2.94e-74,53;UBERON:0001017,1.33e-67,81;UBERON:0000955,2.10e-65,68;UBERON:0006238,2.10e-65,68;UBERON:0001016,1.71e-64,89;UBERON:0003075,5.41e-63,82;UBERON:0007284,5.41e-63,82;UBERON:0002346,7.61e-60,86;UBERON:0010371,1.22e-48,104;UBERON:0003076,3.45e-47,15;UBERON:0003057,3.45e-47,15;UBERON:0002780,4.28e-46,41;UBERON:0001890,4.28e-46,41;UBERON:0003080,4.28e-46,41;UBERON:0006240,4.28e-46,41;UBERON:0003528,1.44e-44,34;UBERON:0002020,1.44e-44,34;UBERON:0010314,5.69e-40,132;UBERON:0001893,3.68e-39,34;UBERON:0007023,2.04e-38,114;UBERON:0002298,1.60e-36,6;UBERON:0002791,2.28e-36,32;UBERON:0004732,6.79e-36,13;UBERON:0003056,2.44e-33,61;UBERON:0004121,1.93e-31,171;UBERON:0000924,1.93e-31,171;UBERON:0006601,1.93e-31,171;UBERON:0001869,1.98e-31,32;UBERON:0004733,4.16e-31,12;UBERON:0002028,4.16e-31,12;UBERON:0007277,4.16e-31,12;UBERON:0000956,1.34e-24,25;UBERON:0000203,1.34e-24,25;UBERON:0011216,1.74e-24,223;UBERON:0000125,8.28e-24,9;UBERON:0002308,8.28e-24,9;UBERON:0000025,4.06e-22,192;UBERON:0001896,1.38e-19,3;UBERON:0005290,1.38e-19,3;UBERON:0010096,1.38e-19,3;UBERON:0002240,1.47e-19,3;UBERON:0005174,1.47e-19,3;UBERON:0001137,1.47e-19,3;UBERON:0000988,9.67e-19,3;UBERON:0004111,1.41e-16,240;UBERON:0002420,1.76e-16,9;UBERON:0007245,1.76e-16,9;UBERON:0010009,1.76e-16,9;UBERON:0010011,1.76e-16,9;UBERON:0000454,1.76e-16,9;UBERON:0002680,2.77e-16,9;UBERON:0001895,2.77e-16,9;UBERON:0010092,2.77e-16,9;UBERON:0002619,6.44e-15,22;UBERON:0009663,5.45e-14,7;UBERON:0002148,2.12e-13,2;UBERON:0006331,2.12e-13,2;UBERON:0009662,2.12e-13,2;UBERON:0001954,4.40e-13,2;UBERON:0003022,4.40e-13,2;UBERON:0002421,4.40e-13,2;UBERON:0002600,4.40e-13,2;UBERON:0001875,5.60e-13,2;UBERON:0006514,5.60e-13,2;UBERON:0000483,7.35e-13,306;UBERON:0005162,8.03e-13,2;UBERON:0000122,8.03e-13,2;UBERON:0001897,9.05e-13,2;UBERON:0010225,9.05e-13,2;UBERON:0000119,1.12e-12,309;UBERON:0000349,2.46e-11,5;UBERON:0002021,7.52e-11,5;UBERON:0001950,2.85e-09,20;UBERON:0001894,3.22e-08,7;UBERON:0006222,3.22e-08,7;UBERON:0002336,1.54e-07,1;UBERON:0011215,1.54e-07,1;UBERON:0001018,1.54e-07,1;UBERON:0002473,1.54e-07,1;UBERON:0005340,1.54e-07,1;UBERON:0003544,1.54e-07,1;UBERON:0005970,1.54e-07,1;UBERON:0002316,1.54e-07,1;UBERON:0001020,1.54e-07,1;UBERON:0002437,1.54e-07,1;UBERON:0002038,1.97e-07,1;UBERON:0009661,1.97e-07,1;UBERON:0002950,1.97e-07,1;UBERON:0001891,1.97e-07,1;UBERON:0009616,1.97e-07,1;UBERON:0010286,1.97e-07,1;UBERON:0003112,3.41e-07,1;UBERON:0011158,3.41e-07,1;UBERON:0003128,3.41e-07,1;UBERON:0001703,3.41e-07,1;UBERON:0002241,3.41e-07,1;UBERON:0004761,3.41e-07,1;UBERON:0009617,3.41e-07,1;UBERON:0000941,5.84e-07,1;UBERON:0001785,5.84e-07,1;UBERON:0002464,5.84e-07,1;UBERON:0004904,5.84e-07,1;UBERON:0001021,5.84e-07,1;UBERON:0003902,5.84e-07,1;UBERON:0005425,5.84e-07,1;UBERON:0002902,7.40e-07,1;UBERON:0009899,7.40e-07,1;UBERON:0002784,8.34e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,2.19418305034661,1.43117993565528,1.23186982565596,1.50651167513763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,2.31920245404628,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.361789315876224,0,0.774054819518572,1.18219047581419,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,3.97666684585995,0,3.04543779442941,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,2.60120219894787,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,3.26888174667781,0,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13705460356962,3.43804764530994,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0.886068179966986,0.854183854313742,0.751145584238999,6.30750115259078,4.32623300993724,4.84351942942791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,1.91560630868582,1.64093091392604,0,1.03735878696327,2.09918339321406,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,1.56215619722769,0.620060389503552,0.697573912132975,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,1.63127359144396,0.460409414939944,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,5.88925401344836,5.64388160621463,4.226557275834,0,0,0,0,0,0,0,0,0,3.01013124618048,0,1.08786384305464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,1.65833887891756,2.58582489654738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p23@GFAP | |||
}} |
Revision as of 15:45, 20 January 2014
Short description: | p23@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -1bp_to_BC127871_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | A1L194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.47e-17 | 3 |
oligodendrocyte | 2.85e-13 | 7 |
macroglial cell | 2.85e-13 | 7 |
astrocyte | 2.85e-13 | 7 |
oligodendrocyte precursor cell | 2.85e-13 | 7 |