FFCP PHASE1:Hg19::chr19:984293..984304,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17956 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BV38 | |||
|association_with_transcript=-23bp_to_ENST00000251289,NM_024100,uc002lqm.1,uc002lqn.1,uc010drx.1,uc010dry.1_5end | |||
|description=CAGE_peak_2_at_WDR18_5end | |||
|id=chr19:984293..984304,+ | |||
|ontology_enrichment_celltype=CL:0002321!8.07e-13!248;CL:0000220!3.25e-12!246;CL:0000548!8.28e-12!679;CL:0000004!8.28e-12!679;CL:0000255!8.28e-12!679;CL:0000012!9.63e-12!682;CL:0000066!1.58e-11!254;CL:0000003!9.17e-08!722;CL:0000222!1.02e-07!119;CL:0000144!1.81e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:1000746;2.80e-09;7!CL:1000612;2.80e-09;7!CL:0002322;4.94e-09;5!CL:1000449;8.79e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,2.97e-09,7;CL:1000612,2.97e-09,7;CL:0002321,6.64e-09,250;CL:0002322,2.51e-08,5;CL:0000393,3.50e-07,61;CL:0000211,3.50e-07,61;CL:0002202,3.58e-07,9;CL:0002632,3.58e-07,9;CL:1000449,8.47e-07,15;CL:0002328,8.49e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.27e-09!235;DOID:14566!4.13e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.20e-08!312;UBERON:0000483!5.68e-08!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.80e-09;7!UBERON:0001229;2.80e-09;7!UBERON:0006555;8.79e-07;15!UBERON:0000353;8.79e-07;15!UBERON:0004819;8.79e-07;15!UBERON:0001285;8.79e-07;15!UBERON:0007684;8.79e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,8.05e-10,199;UBERON:0010532,2.97e-09,7;UBERON:0000074,2.97e-09,7;UBERON:0001229,2.97e-09,7;UBERON:0001230,2.97e-09,7;UBERON:0003220,2.97e-09,7;UBERON:0005749,2.97e-09,7;UBERON:0004199,2.97e-09,7;UBERON:0004209,2.97e-09,7;UBERON:0004198,2.97e-09,7;UBERON:0005256,3.82e-09,122;UBERON:0003104,1.78e-08,160;UBERON:0009142,1.78e-08,160;UBERON:0005103,5.55e-08,8;UBERON:0000083,5.55e-08,8;UBERON:0009201,5.55e-08,8;UBERON:0006553,5.55e-08,8;UBERON:0003074,5.55e-08,8;UBERON:0003060,5.55e-08,8;UBERON:0007503,1.54e-07,78;UBERON:0004876,1.60e-07,11;UBERON:0005177,5.09e-07,101;UBERON:0000080,5.38e-07,9;UBERON:0002120,5.38e-07,9;UBERON:0004875,5.38e-07,9;UBERON:0005721,5.38e-07,9;UBERON:0005754,5.38e-07,9;UBERON:0007297,5.38e-07,9;UBERON:0007196,8.12e-07,15;UBERON:0001558,8.12e-07,15;UBERON:0004211,8.47e-07,15;UBERON:0009773,8.47e-07,15;UBERON:0001231,8.47e-07,15;UBERON:0001285,8.47e-07,15;UBERON:0007684,8.47e-07,15;UBERON:0004208,8.47e-07,15;UBERON:0004815,8.49e-07,3;UBERON:0002031,8.49e-07,3;UBERON:0000353,8.62e-07,15 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,1.47440361900905,3.48900583986214,0.218441372130172,1.05506791291381,0.495065411840187,0,0,0,0,0,0.861847406537515,0.816002764977012,0.940364164434263,0,0.684372125364421,0.502170558379211,0.382067028739756,0.57470412614962,0.550975469195755,0,0,0,1.83884244895785,1.8072355126695,1.84877005083394,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,1.02290049474824,1.0843174571537,0,0.144846518960824,0,0.973269740605272,0.378139268656271,0.443458794925128,0.43917392846563,0.523916301990851,0.728590576585084,0.370784442784429,0,0,0.26591592103773,0.238490624305342,0,0.371457501329565,0.39752481473341,0.860234595106124,0,0,0.838998872419812,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,1.00416183829401,0.402829317109147,0.760272105718513,0.488124115096339,0.367663080345869,0,0.0892997282840798,0,0.450445921933289,1.53316637465883,0.949265659568129,1.28241220751285,0,0,1.3082821564276,0,0.886413581652058,0.926864265692532,0.286836620748814,0,0,1.06748995729705,0.74000264525148,0,0.134710672069688,0.326923806226917,0.151357427644931,0.576175924479999,0.234321431833797,0.624320153660641,0.570471821544449,0,0.23486899728753,0.647491777472526,0.421352420106746,0.61246251376468,0.61417158655884,0,0,0,2.73048408581408,3.59309070908119,0.505008341862199,0.250237039743928,0,0,0,0.300476117813194,0.567160915800105,0,0.427114777637135,0,0.300091096084402,0,0,0.18611685633159,0.337552664482532,0.292311015483596,1.00973509697646,0.184099797284599,0,0.710019185033229,0.201504196455281,0.67824236924195,1.15956511897978,0,0.286804595389004,1.09776335516636,1.19276791489337,2.09149097165133,1.24393266018445,1.00928340350251,1.45990943630332,0,1.92972281457866,4.14404764057442,0,0,0,0.505754070234305,0.964044119533928,0.330881918197182,0.435758888184812,0.474541238222193,0.539325232640658,0.196221465125346,0.38474715694639,0,2.80483547606892,0.4115740113314,1.47008711385542,1.26755034821831,0,0.590789906681404,0.441463099414651,0.860919069801795,0.514703430895577,0.219500570817251,4.49607013030478,0.703702806881416,0.185176890317059,0.325808305310325,0,1.44331342025273,0.231860809950154,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0,0.671928512795438,1.13420077793909,0.895585227028483,0.581267877027924,1.15014803749563,0,0.088048434013226,0,0,0,0.190493682876507,0,0,0,0.411309970813294,0.901029173531752,0.285826432630578,0.448524337381443,0.87192013766656,0.5867062865676,0.646358578788889,3.57656445851882,0.845302752556,0.531876233169741,0,1.28603687131071,2.83698264046557,0.799266537048298,0.142977993658148,0.542621605391443,0.823240336780769,0.65147236858747,0,1.58390374586686,0.301439377059586,0,0.399891964728228,0,0,0,0.718874566474748,1.14861935834114,0,0.579125226670317,0.410952645100767,0.358121926479791,0.112085143993527,0,0.215627574859517,0,0.254094624222463,0,0.773288812777695,0.167516265334349,1.27587750330633,0.749007023947182,0,0,0.12269149171914,0,0.813795071099207,0,0.178428988797162,0.315404830067869,0.468565659970853,0.902838299183157,0,0,0.664225598535437,0.368738337083406,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0,2.12189300012382,0,0.604780586659361,0.248107807818777,0.767309866440312,1.12264037773229,0.256278298511402,0.511707249066704,0.321707842287215,0,0.462629081407967,0.532685175939381,0.739144404124282,0,0.348631135379878,0.725156697549733,1.80455823272956,0.0920809889358963,1.37777337797528,0.728364672026868,0,0.451199612907412,0.539107359730903,0,2.92278449306521,0.633309773357254,0,1.36074964221213,1.0795795805107,1.54227252690289,1.35473218771926,3.01013864312912,0.764628819135115,0.831076008928724,1.34324852833307,0.438519753291869,0,0.512900250232778,0.984043937099117,0.325378394664303,0.206082023295445,0.54941678891006,1.07262349896764,0,0,1.6068392984416,0.48335359146061,1.69453478826109,1.07452572308291,0.275673144969061,0.107420244868274,0.580066775656914,1.10794615640931,0.445160178233687,0.661139661443912,0.192190067365106,0.510450849978337,0.30347334256665,1.39453664789186,1.25924938732256,1.3940745403212,0.616067160352178,2.66153015158511,1.73986598415015,1.8532421910392,1.00187420719394,0.744316738719335,0.316379424718726,0.762520775695299,1.27948895655667,0.42793898803392,0.636406495851874,0.78494864019923,0.539617372749944,1.09814811894422,0.353437207037059,1.01091240786658,1.58510321173008,0,0,0.243713489631284,0,0.545999645631943,0.282810863907425,0,1.10273068709225,0,0,1.73632660280006,0,0.608731130888112,0.30982349809975,0.845086807596724,0.573645408816206,0.785992328104969,0.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| |||
|short_description=p2@WDR18 | |||
}} |
Revision as of 20:10, 20 January 2014
Short description: | p2@WDR18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WDR18_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000251289, NM_024100, uc002lqm.1, uc002lqn.1, uc010drx.1, uc010dry.1_5end |
EntrezGene: | WDR18 |
HGNC: | 17956 |
UniProt: | Q9BV38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 2.97e-09 | 7 |
kidney corpuscule cell | 2.97e-09 | 7 |
embryonic cell | 6.64e-09 | 250 |
embryonic stem cell | 2.51e-08 | 5 |
electrically responsive cell | 3.50e-07 | 61 |
electrically active cell | 3.50e-07 | 61 |
epithelial cell of tracheobronchial tree | 3.58e-07 | 9 |
epithelial cell of lower respiratory tract | 3.58e-07 | 9 |
epithelial cell of nephron | 8.47e-07 | 15 |
bronchial epithelial cell | 8.49e-07 | 3 |