FFCP PHASE1:Hg19::chr19:39390587..39390646,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4793 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7798 | |||
|TSSclassifier=strong | |||
|UniProt=Q15653,G5E9C2 | |||
|association_with_transcript=0bp_to_ENST00000313582,ENST00000392079,ENST00000509705,uc002ojw.2,uc002ojx.2,uc002ojy.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_NFKBIB_5end | |||
|id=chr19:39390587..39390646,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.27e-46!140;CL:0000988!1.69e-45!182;CL:0000037!7.88e-45!172;CL:0000566!7.88e-45!172;CL:0002032!2.72e-41!165;CL:0000837!2.72e-41!165;CL:0002031!1.46e-36!124;CL:0002087!6.89e-35!119;CL:0000763!1.47e-25!112;CL:0000049!1.47e-25!112;CL:0000766!3.26e-25!76;CL:0002057!4.42e-24!42;CL:0000557!9.86e-22!71;CL:0000860!1.04e-21!45;CL:0000839!6.56e-21!70;CL:0002009!4.15e-20!65;CL:0002194!6.36e-19!63;CL:0000576!6.36e-19!63;CL:0000040!6.36e-19!63;CL:0000559!6.36e-19!63;CL:0000134!3.52e-15!358;CL:0000063!2.86e-14!578;CL:0000542!4.36e-14!53;CL:0000051!4.36e-14!53;CL:0000838!6.81e-14!52;CL:0002320!1.53e-13!365;CL:0000003!2.81e-11!722;CL:0002371!3.94e-10!591;CL:0000219!1.12e-09!390;CL:0000723!2.83e-09!436;CL:0000048!3.85e-09!430;CL:0000144!1.55e-08!625;CL:0000034!3.60e-08!444;CL:0000945!2.46e-07!24;CL:0000826!2.46e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.81e-18;33!CL:0002057;4.81e-18;33!CL:0000473;7.49e-16;39!CL:0000234;7.49e-16;39!CL:0000576;5.93e-13;48!CL:0000766;1.02e-12;69!CL:0002087;3.51e-11;104!CL:0000738;1.73e-10;136!CL:0000988;3.25e-09;177!CL:0000542;2.78e-08;53!CL:0000763;7.77e-08;100!CL:0000945;2.08e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.00e-49,136;CL:0000988,9.95e-48,177;CL:0000037,4.04e-47,168;CL:0002032,1.60e-43,161;CL:0000837,1.60e-43,161;CL:0002031,4.28e-39,120;CL:0002087,2.05e-37,115;CL:0000766,5.17e-28,72;CL:0000763,1.14e-27,108;CL:0000049,1.14e-27,108;CL:0000473,1.18e-24,48;CL:0000234,1.18e-24,48;CL:0000557,2.26e-24,67;CL:0000860,4.42e-24,42;CL:0002057,4.42e-24,42;CL:0000839,1.68e-23,66;CL:0002009,8.98e-23,61;CL:0002194,1.57e-21,59;CL:0000576,1.57e-21,59;CL:0000040,1.57e-21,59;CL:0000559,1.57e-21,59;CL:0000134,1.67e-15,354;CL:0000542,4.36e-14,53;CL:0000051,4.36e-14,53;CL:0000838,6.81e-14,52;CL:0002320,7.74e-14,361;CL:0000219,6.65e-10,386;CL:0000723,3.12e-09,433;CL:0000048,4.24e-09,427;CL:0000034,3.96e-08,441;CL:0000945,2.46e-07,24;CL:0000826,2.46e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-17;42!CL:0000051;2.78e-08;53!CL:0000049;1.23e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.00e-25!102;UBERON:0003061!7.00e-25!102;UBERON:0002193!9.43e-25!112;UBERON:0002371!2.44e-20!80;UBERON:0001474!3.26e-17!86;UBERON:0002405!1.52e-16!115;UBERON:0003081!2.75e-14!216;UBERON:0004765!6.61e-12!101;UBERON:0001434!6.61e-12!101;UBERON:0002384!9.16e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.23e-27,98;UBERON:0003061,4.23e-27,98;UBERON:0002193,8.13e-27,108;UBERON:0002371,1.24e-22,76;UBERON:0002405,6.32e-22,93;UBERON:0001474,3.89e-19,82;UBERON:0004765,2.10e-15,90;UBERON:0003081,3.94e-14,203;UBERON:0002384,4.97e-12,371;UBERON:0001434,1.06e-11,100 | |||
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| |||
|short_description=p1@NFKBIB | |||
}} |
Revision as of 23:10, 20 January 2014
Short description: | p1@NFKBIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFKBIB_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000313582, ENST00000392079, ENST00000509705, uc002ojw.2, uc002ojx.2, uc002ojy.2_5end |
EntrezGene: | NFKBIB |
HGNC: | 7798 |
UniProt: | Q15653G5E9C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.23e-27 | 98 |
blood island | 4.23e-27 | 98 |
hemolymphoid system | 8.13e-27 | 108 |
bone marrow | 1.24e-22 | 76 |
immune system | 6.32e-22 | 93 |
bone element | 3.89e-19 | 82 |
skeletal element | 2.10e-15 | 90 |
lateral plate mesoderm | 3.94e-14 | 203 |
connective tissue | 4.97e-12 | 371 |
skeletal system | 1.06e-11 | 100 |