FFCP PHASE1:Hg19::chr2:201980961..201980975,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1876 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000342795_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_13_at_CFLAR_5end | |||
|id=chr2:201980961..201980975,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.68e-25!42;CL:0000766!2.78e-24!76;CL:0000860!3.04e-22!45;CL:0000557!1.42e-20!71;CL:0000738!1.63e-20!140;CL:0002009!3.86e-20!65;CL:0002194!1.61e-19!63;CL:0000576!1.61e-19!63;CL:0000040!1.61e-19!63;CL:0000559!1.61e-19!63;CL:0000839!1.17e-18!70;CL:0002087!9.17e-17!119;CL:0002031!5.26e-16!124;CL:0000037!5.73e-11!172;CL:0000566!5.73e-11!172;CL:0002032!1.03e-10!165;CL:0000837!1.03e-10!165;CL:0000763!1.08e-10!112;CL:0000049!1.08e-10!112;CL:0000988!4.13e-10!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.36e-30;33!CL:0002057;3.36e-30;33!CL:0000473;1.95e-26;39!CL:0000234;1.95e-26;39!CL:0000576;2.56e-23;48!CL:0000766;1.76e-17;69!CL:0000094;4.18e-09;8!CL:0002087;2.25e-08;104!CL:0000763;2.72e-07;100!CL:0000738;9.77e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.57e-38,48;CL:0000234,1.57e-38,48;CL:0000860,1.14e-37,42;CL:0002057,1.14e-37,42;CL:0000766,9.37e-37,72;CL:0002009,6.09e-32,61;CL:0002194,5.81e-31,59;CL:0000576,5.81e-31,59;CL:0000040,5.81e-31,59;CL:0000559,5.81e-31,59;CL:0000557,7.71e-31,67;CL:0000839,5.99e-28,66;CL:0000738,2.10e-26,136;CL:0002087,1.43e-22,115;CL:0002031,5.07e-21,120;CL:0000763,1.93e-19,108;CL:0000049,1.93e-19,108;CL:0000037,8.59e-17,168;CL:0002032,1.92e-16,161;CL:0000837,1.92e-16,161;CL:0000988,1.21e-14,177;CL:0000094,3.95e-09,8;CL:0000134,5.06e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.44e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.26e-27!112;UBERON:0002390!4.29e-24!102;UBERON:0003061!4.29e-24!102;UBERON:0003081!3.80e-19!216;UBERON:0002371!9.86e-19!80;UBERON:0002405!3.77e-16!115;UBERON:0001474!7.18e-16!86;UBERON:0004765!2.16e-12!101;UBERON:0001434!2.16e-12!101;UBERON:0002204!5.90e-08!167;UBERON:0001009!7.40e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.26e-07;15!UBERON:0000179;3.26e-07;15!UBERON:0000463;3.26e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.07e-38,108;UBERON:0002390,5.29e-34,98;UBERON:0003061,5.29e-34,98;UBERON:0002405,4.11e-31,93;UBERON:0002371,2.93e-28,76;UBERON:0001474,1.20e-24,82;UBERON:0003081,3.92e-24,203;UBERON:0004765,9.64e-23,90;UBERON:0001434,3.83e-19,100;UBERON:0000926,2.54e-12,315;UBERON:0004120,2.54e-12,315;UBERON:0006603,2.54e-12,315;UBERON:0002204,3.63e-12,167;UBERON:0000178,1.68e-07,15;UBERON:0000179,1.68e-07,15;UBERON:0000463,1.68e-07,15 | |||
|phase1_expression=1.45342703416445,0.642301571672949,1.55049844505568,0,1.78784437770915,1.74467704820074,2.53299878168311,0,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0.975865597581014,0.246242116153576,0.612002073732759,0,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,3.93364276848904,5.75744097145819,1.39334510984468,2.75826367343678,2.409647350226,1.84877005083394,0.232401601740905,0,0.880801318004542,6.09394949385065,17.046278034962,18.4459240108474,1.56740831967947,1.29557466407592,2.06060454107349,4.21654892460738,5.29026321164333,3.63876091781724,9.29716147622739,8.22335776043652,15.7950249156503,10.6446185159196,5.89169625016932,9.93225365532058,25.1664346937732,17.4280864567633,27.0852973188684,8.094420600332,7.91427835167753,11.4608977066993,22.038040250705,16.6883094079569,27.4914964093588,5.60747210317417,5.38551875578406,6.81959600852311,12.7692064996577,5.6738522469114,12.4564449799115,10.80369260604,7.82224377630302,15.6375968187684,11.502590550034,9.94349617166425,10.4432587855492,2.11255286311942,2.55125159958052,1.04829322754188,2.69588714751588,2.4028302854641,2.25015821375912,0.855038231223746,1.9891667719909,2.37463399894024,0,1.63841583378639,0.889509253863555,0.426730222566507,0,0.574752439954483,1.32208974556972,0.954053754535364,0,1.17447437874188,0,2.64342657158052,2.80254281490768,0.526768169550154,1.7703879310245,2.35806457649499,2.05601498999509,1.00311897234407,0.977766799900771,1.4203434172042,0,0.222820913770347,0.883817722424512,0.886135578334485,1.08321545506006,0.768547918354051,1.04047478047903,0,0.276350017785848,0.289803085735052,0.444859689486181,0.802622484269139,0,0.339928028092699,1.14966148080576,2.40539211837841,1.51811815211702,0.637130828648193,0.651083453856419,0.950452044448374,1.50575119077773,0.255973222308837,1.24930726552346,1.89421801635213,0.821127996921047,2.62088766192152,4.01160293675261,2.31719046212478,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.087834785693126,0.327447688744282,0.728590576585084,1.48313777113772,0.324547393654683,0.348259474598534,0.930705723632056,0.715471872916026,0,0,2.38514888840046,0,0.347140501607594,1.13061588384802,1.67799774483962,0.550236083880135,0.626984899610432,2.06733407335463,0.35576626268671,1.67360306382335,0.805658634218294,1.52054421143703,2.4406205754817,0.367663080345869,0,0.803697554556718,0.44905874525234,1.0135033243499,1.53316637465883,0.949265659568129,2.01521918323448,50.076558625704,34.9002237733493,0.436094052142534,0,0.506522046658319,3.70745706277013,0.573673241497627,0,1.12135520028461,1.06748995729705,0,0,0.538842688278752,0.326923806226917,0.151357427644931,0,0,0.312160076830321,2.2818872861778,1.49448680551801,0.23486899728753,0,0,0.408308342509787,0.122834317311768,0.413303124703062,1.18800285728205,1.23633464639278,0.910161361938026,1.43723628363248,0,0.125118519871964,0,0,0.612975591598039,1.20190447125277,0.340296549480063,1.07633781413317,0.213557388818567,1.05965950579781,0.600182192168805,0.103052529238439,1.03056216018252,0.37223371266318,1.18143432568886,0.292311015483596,1.7670364197088,0.644349290496095,0.161646056818812,1.77504796258307,0.302256294682921,0.169560592310488,1.73934767846967,3.54569956768085,1.72082757233402,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,1.28648187638577,1.38134921352481,4.17931135228781,2.88751792667834,0.354920400119532,1.01150814046861,0,0.772057809126758,0.217879444092406,0.237270619111097,0.134831308160164,0.588664395376038,0.769494313892781,0.738155454624648,0,0,0,0,0.982827216677626,1.18157981336281,0.441463099414651,0.122988438543114,0.343135620597051,1.09750285408626,4.49607013030478,0.703702806881416,0.555530670951178,0,0,0,0.115930404975077,0.234817388471643,4.18662698507114,4.1668696131895,2.47330397904978,1.58040879591855,0,1.96973604869918,1.17002132569619,1.33768046059855,0.93733833986777,1.6798212819886,2.97727704209012,0.895585227028483,1.16253575405585,0,1.97065295158377,0.176096868026452,1.03664057770386,0.864719720501769,0.75745460055828,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0.448524337381443,0.43596006883328,0.07333828582095,0.904902010304444,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,0.799783929456456,2.43247561282381,1.00451418286425,0,0.718874566474748,0,0,1.15825045334063,0.205476322550383,0.895304816199478,0.112085143993527,2.95546140302891,1.72502059887614,4.2353201972317,0,0,0.773288812777695,0,0,65.912618107352,56.8406772487647,108.991280033677,0,0,0,0.623912584592421,0.535286966391485,0.315404830067869,0.702848489956279,0.601892199455438,2.27407504055985,1.03473071292505,0,0,0.434418072340414,0.391602314925481,0,1.86091223510599,3.66714141391649,1.921096040462,0,0,0.604780586659361,0,1.53461973288062,0.280660094433074,0.640695746278505,2.0468289962668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| |||
|short_description=p13@CFLAR | |||
}} |
Revision as of 07:52, 21 January 2014
Short description: | p13@CFLAR |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CFLAR_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000342795_5end |
EntrezGene: | CFLAR |
HGNC: | 1876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.57e-38 | 48 |
phagocyte | 1.57e-38 | 48 |
classical monocyte | 1.14e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-37 | 42 |
myeloid leukocyte | 9.37e-37 | 72 |
macrophage dendritic cell progenitor | 6.09e-32 | 61 |
monopoietic cell | 5.81e-31 | 59 |
monocyte | 5.81e-31 | 59 |
monoblast | 5.81e-31 | 59 |
promonocyte | 5.81e-31 | 59 |
granulocyte monocyte progenitor cell | 7.71e-31 | 67 |
myeloid lineage restricted progenitor cell | 5.99e-28 | 66 |
leukocyte | 2.10e-26 | 136 |
nongranular leukocyte | 1.43e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 5.07e-21 | 120 |
myeloid cell | 1.93e-19 | 108 |
common myeloid progenitor | 1.93e-19 | 108 |
hematopoietic stem cell | 8.59e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.92e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-16 | 161 |
hematopoietic cell | 1.21e-14 | 177 |
granulocyte | 3.95e-09 | 8 |
mesenchymal cell | 5.06e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.07e-38 | 108 |
hematopoietic system | 5.29e-34 | 98 |
blood island | 5.29e-34 | 98 |
immune system | 4.11e-31 | 93 |
bone marrow | 2.93e-28 | 76 |
bone element | 1.20e-24 | 82 |
lateral plate mesoderm | 3.92e-24 | 203 |
skeletal element | 9.64e-23 | 90 |
skeletal system | 3.83e-19 | 100 |
mesoderm | 2.54e-12 | 315 |
mesoderm-derived structure | 2.54e-12 | 315 |
presumptive mesoderm | 2.54e-12 | 315 |
musculoskeletal system | 3.63e-12 | 167 |
blood | 1.68e-07 | 15 |
haemolymphatic fluid | 1.68e-07 | 15 |
organism substance | 1.68e-07 | 15 |