FFCP PHASE1:Hg19::chr20:62710772..62710783,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10287 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13735 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000479996_5end | |||
|coexpression_cluster_id=C299 | |||
|description=CAGE_peak_4_at_RGS19_5end | |||
|id=chr20:62710772..62710783,- | |||
|ontology_enrichment_celltype=CL:0000037!7.82e-75!172;CL:0000566!7.82e-75!172;CL:0002032!6.28e-70!165;CL:0000837!6.28e-70!165;CL:0000988!6.36e-68!182;CL:0000738!1.07e-64!140;CL:0000763!2.44e-55!112;CL:0000049!2.44e-55!112;CL:0002087!1.10e-51!119;CL:0002031!1.48e-51!124;CL:0000766!3.48e-49!76;CL:0000557!7.62e-43!71;CL:0000839!4.33e-39!70;CL:0002009!1.71e-38!65;CL:0002194!1.61e-37!63;CL:0000576!1.61e-37!63;CL:0000040!1.61e-37!63;CL:0000559!1.61e-37!63;CL:0002057!5.63e-34!42;CL:0000860!1.59e-30!45;CL:0000134!1.89e-15!358;CL:0002320!2.25e-14!365;CL:0000542!9.15e-13!53;CL:0000051!9.15e-13!53;CL:0000838!3.31e-12!52;CL:0000219!4.95e-11!390;CL:0002393!7.46e-10!9;CL:0002397!7.46e-10!9;CL:0000094!1.45e-09!8;CL:0000048!1.54e-07!430;CL:0000034!1.64e-07!444;CL:0000723!3.17e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.64e-34;33!CL:0002057;2.64e-34;33!CL:0000473;1.99e-31;39!CL:0000234;1.99e-31;39!CL:0000576;1.35e-27;48!CL:0000766;8.02e-26;69!CL:0000763;1.65e-20;100!CL:0000094;3.89e-16;8!CL:0000081;3.17e-11;11!CL:0002393;4.39e-11;6!CL:0002397;4.39e-11;6!CL:0000738;4.92e-11;136!CL:0002087;2.07e-10;104!CL:0000988;9.46e-10;177!CL:0000875;1.47e-07;3!CL:0002396;1.47e-07;3!CL:0000775;1.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.83e-71,108;CL:0000049,9.83e-71,108;CL:0000037,1.28e-65,168;CL:0000766,1.81e-65,72;CL:0000988,4.36e-61,177;CL:0002032,3.12e-58,161;CL:0000837,3.12e-58,161;CL:0000473,8.22e-55,48;CL:0000234,8.22e-55,48;CL:0000860,9.67e-52,42;CL:0002057,9.67e-52,42;CL:0002194,1.51e-51,59;CL:0000576,1.51e-51,59;CL:0000040,1.51e-51,59;CL:0000559,1.51e-51,59;CL:0000738,4.22e-51,136;CL:0000557,6.19e-51,67;CL:0000839,1.96e-49,66;CL:0002009,2.03e-49,61;CL:0002087,1.78e-39,115;CL:0002031,3.61e-34,120;CL:0000134,1.18e-19,354;CL:0002320,7.89e-19,361;CL:0002393,7.87e-17,9;CL:0002397,7.87e-17,9;CL:0000094,2.67e-16,8;CL:0000219,6.13e-16,386;CL:0000034,1.83e-12,441;CL:0000048,1.90e-12,427;CL:0000723,5.70e-12,433;CL:0000081,2.44e-11,11;CL:0000875,1.47e-07,3;CL:0002396,1.47e-07,3;CL:0000775,1.88e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-36;42!CL:0000049;1.70e-20;108 | |||
|ontology_enrichment_disease=DOID:1240!2.18e-11!39;DOID:8692!6.26e-10!31;DOID:2531!1.65e-09!51;DOID:0060083!1.65e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.76e-09;31!DOID:1240;1.63e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.01e-10,39;DOID:8692,9.43e-10,31;DOID:2531,8.69e-08,51;DOID:0060083,8.69e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.19e-45!102;UBERON:0003061!3.19e-45!102;UBERON:0002193!5.30e-42!112;UBERON:0002371!1.12e-36!80;UBERON:0001474!2.39e-32!86;UBERON:0002405!4.05e-28!115;UBERON:0004765!6.47e-24!101;UBERON:0001434!6.47e-24!101;UBERON:0002384!2.41e-13!375;UBERON:0003081!4.91e-11!216;UBERON:0002204!5.67e-08!167;UBERON:0000178!1.88e-07!15;UBERON:0000179!1.88e-07!15;UBERON:0000463!1.88e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.71e-14;15!UBERON:0000179;6.71e-14;15!UBERON:0000463;6.71e-14;15!UBERON:0002390;1.36e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.44e-57,98;UBERON:0003061,1.44e-57,98;UBERON:0002193,2.65e-52,108;UBERON:0002371,3.03e-45,76;UBERON:0001474,7.24e-41,82;UBERON:0002405,2.13e-39,93;UBERON:0004765,6.11e-36,90;UBERON:0001434,6.69e-31,100;UBERON:0003081,1.25e-18,203;UBERON:0002384,1.04e-17,371;UBERON:0000178,6.33e-14,15;UBERON:0000179,6.33e-14,15;UBERON:0000463,6.33e-14,15;UBERON:0002204,5.11e-13,167;UBERON:0000926,5.57e-07,315;UBERON:0004120,5.57e-07,315;UBERON:0006603,5.57e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.0787107813136792,6.68719270643137,1.91914699048606,3.71558695958582,0,0,0,0.92960640696362,2.55904618477359,1.76160263600908,1.10799081706375,1.60435557976113,1.51907609501096,0.447830948479849,0.647787332037959,0.515151135268373,12.0680538187039,9.44689859222024,13.3421233653299,2.78914844286822,2.87817521615278,1.85823822537062,1.1507695692886,1.2808035326455,2.36482229888585,1.03423704220986,3.22742341791913,0,5.27078550719293,4.09359225086769,1.57306439111559,3.36692281607993,2.88836124368484,1.27867425159808,2.30895910130701,1.99463657621632,4.68847225585964,0.290209238628584,0.56738522469114,1.24564449799115,2.00998932205395,1.5644487552606,2.17188844705117,1.21079900526674,0.368277635987565,0.949387162322653,7.39393502091796,13.8192794977278,8.80566311135179,6.29040334420373,5.10601435661121,3.37523732063868,21.0909430368524,20.2895010743072,13.6998115323475,0,0,0,2.98711155796555,2.40237592221607,0.574752439954483,0.661044872784862,0,0.569212969109448,2.93618594685469,1.14681968437569,1.32171328579026,0.560508562981536,1.58030450865046,0.393419540227666,0,0.205601498999509,1.00311897234407,0.32592226663359,0,1.94826728407911,0.891283655081389,0.294605907474837,0.443067789167242,0.270803863765016,1.0247305578054,1.56071217071854,0.493313713811028,1.10540007114339,2.02862160014537,0.889719378972363,1.60524496853828,0,1.35971211237079,0,0.34362744548263,0.506039384039006,0.318565414324097,0.651083453856419,1.90090408889675,0.752875595388864,0.511946444617674,3.74792179657038,1.18388626022008,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,3.24547393654683,3.65672448328461,3.58986493400936,3.81584998888547,4.57595928624102,1.85728750664782,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,25.038279312852,15.511210565933,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46217006087397,0.702012795417713,1.93220510975347,0,0,0,0,0,0,0.985326475791887,1.58487181223807,0.829312462163088,5.18831832301061,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.01354254859276,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.215627574859517,0.898401253958239,0,0,0,0,0,13.4821264310493,11.966458368161,14.5045429702612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,3.23571301227925,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,6.5968189200182,6.88173486428138,3.98753031021914,4.76463550915578,7.4045209155515,3.24236655596359,2.16012574895246,4.75875105776562,0.106824071127473,0,0,1.30062222588003,1.15415370381156,0,0.159426272728822,2.3949524571938,4.40462351304443,5.50351315082095,0.973865820823666,1.96558024679421,4.33645890163065,5.01375666473674,2.50634477090067,1.86220955581764,1.76646882614069,2.01799707191048,3.83261613921294,2.40453741329035,0.614481528616916,0.894704431569664,0.667396566847634,1.9538809540204,0,0,1.6227340708559,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0.296964680832639,0,0,0.422008249231538,0,0,0,0,1.65770349318689,0,0,0.123084805461069,0,0,0,1.02314474045374,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0.23056390438806,0,0,0,0,0,1.02193298195737,0.784901281975124,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0,0.182454789215666,0,0,0,0,0,1.76922422959766,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0.600420288709789,0.136905378891993,2.55493176133945,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.439656701034247,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,3.20075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0.3062454773532,0.321146125482298,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.253663240775627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| |||
|short_description=p4@RGS19 | |||
}} |
Revision as of 12:54, 21 January 2014
Short description: | p4@RGS19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RGS19_5end |
Coexpression cluster: | C299_CD14CD16_Eosinophils_Neutrophils_CD14_Whole_Basophils_blood |
Association with transcript: | 0bp_to_ENST00000479996_5end |
EntrezGene: | RGS19 |
HGNC: | 13735 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.44e-57 | 98 |
blood island | 1.44e-57 | 98 |
hemolymphoid system | 2.65e-52 | 108 |
bone marrow | 3.03e-45 | 76 |
bone element | 7.24e-41 | 82 |
immune system | 2.13e-39 | 93 |
skeletal element | 6.11e-36 | 90 |
skeletal system | 6.69e-31 | 100 |
lateral plate mesoderm | 1.25e-18 | 203 |
connective tissue | 1.04e-17 | 371 |
blood | 6.33e-14 | 15 |
haemolymphatic fluid | 6.33e-14 | 15 |
organism substance | 6.33e-14 | 15 |
musculoskeletal system | 5.11e-13 | 167 |
mesoderm | 5.57e-07 | 315 |
mesoderm-derived structure | 5.57e-07 | 315 |
presumptive mesoderm | 5.57e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.01e-10 | 39 |
myeloid leukemia | 9.43e-10 | 31 |
hematologic cancer | 8.69e-08 | 51 |
immune system cancer | 8.69e-08 | 51 |