FFCP PHASE1:Hg19::chr3:52099097..52099134,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100128378 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=34426 | |||
|TSSclassifier=weak | |||
|UniProt=Q6ZRV3 | |||
|association_with_transcript=0bp_to_NR_027331,uc010hmb.1_5end | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_1_at_C3orf74_5end | |||
|id=chr3:52099097..52099134,- | |||
|ontology_enrichment_celltype=CL:0002076!9.66e-25!43;CL:0000223!4.87e-17!59;CL:0002251!6.10e-17!21;CL:0002621!1.17e-15!3;CL:0002159!1.35e-12!13;CL:0002327!5.92e-11!4;CL:0001014!6.56e-11!2;CL:0001016!6.56e-11!2;CL:0000066!4.73e-10!254;CL:0000622!2.17e-09!5;CL:0002368!4.24e-09!13;CL:0000154!6.83e-08!6;CL:0002623!1.69e-07!3;CL:0000068!3.49e-07!3;CL:0000069!3.49e-07!3;CL:0000307!3.49e-07!3;CL:0000377!3.49e-07!3;CL:0002231!4.48e-07!3;CL:0002166!8.00e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002621;2.64e-38;3!CL:0001014;1.15e-15;2!CL:0001016;1.15e-15;2!CL:0002251;2.09e-13;20!CL:0002076;6.70e-12;42!CL:0002328;9.90e-11;3!CL:0002623;9.90e-11;3!CL:0000453;4.79e-07;5!CL:0000312;5.08e-07;5!CL:0000622;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.64e-38,3;CL:0001014,1.15e-15,2;CL:0001016,1.15e-15,2;CL:0002251,2.28e-13,20;CL:0002076,3.23e-11,42;CL:0002328,9.90e-11,3;CL:0002623,1.20e-10,3;CL:0000223,3.00e-08,58;CL:0000453,4.79e-07,5;CL:0000312,5.08e-07,5;CL:0000622,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.37e-29;1!UBERON:0003056;9.90e-11;3 | |||
|ontology_enrichment_disease=DOID:1749!6.97e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!4.83e-17!21;UBERON:0001949!1.17e-15!3;UBERON:0000161!2.59e-14!35;UBERON:0000165!2.22e-12!28;UBERON:0000930!2.22e-12!28;UBERON:0001004!1.37e-11!72;UBERON:0001911!5.92e-11!4;UBERON:0005333!5.92e-11!4;UBERON:0008425!5.92e-11!4;UBERON:0005311!5.92e-11!4;UBERON:0003714!5.95e-11!2;UBERON:0004119!1.99e-08!169;UBERON:0000925!1.99e-08!169;UBERON:0006595!1.99e-08!169;UBERON:0001444!4.07e-08!48;UBERON:0003102!4.85e-08!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.64e-38;3!UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0003929;4.36e-17;7!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0003350;4.37e-15;8!UBERON:0001828;4.37e-15;8!UBERON:0000161;4.53e-14;19!UBERON:0000166;4.53e-14;19!UBERON:0004807;2.96e-12;22!UBERON:0004815;9.90e-11;3!UBERON:0002031;9.90e-11;3!UBERON:0000486;2.13e-10;12!UBERON:0000165;8.81e-10;28!UBERON:0003729;1.13e-09;13!UBERON:0010371;3.27e-09;31!UBERON:0005911;7.94e-08;36!UBERON:0002185;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.64e-38,3;UBERON:0000941,1.33e-29,1;UBERON:0001785,1.33e-29,1;UBERON:0002464,1.33e-29,1;UBERON:0004904,1.33e-29,1;UBERON:0001021,1.33e-29,1;UBERON:0003902,1.33e-29,1;UBERON:0005425,1.33e-29,1;UBERON:0003714,1.54e-15,2;UBERON:0005162,1.54e-15,2;UBERON:0000122,1.54e-15,2;UBERON:0003350,4.37e-15,8;UBERON:0001828,4.37e-15,8;UBERON:0000166,3.20e-12,22;UBERON:0004815,9.90e-11,3;UBERON:0002031,9.90e-11,3;UBERON:0004807,8.81e-10,28;UBERON:0001444,1.05e-09,49;UBERON:0003729,1.13e-09,13;UBERON:0000165,1.92e-09,29;UBERON:0000930,1.92e-09,29;UBERON:0000033,1.51e-08,56;UBERON:0001781,1.96e-08,4;UBERON:0000153,9.25e-08,62;UBERON:0007811,9.25e-08,62;UBERON:0000161,9.82e-08,36;UBERON:0002185,6.04e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,1.36373060295417,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96325770603289,0,0.904760751704678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,6.96421759102155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.294443155503077,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03608082081518,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.653150243690884,0,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@C3orf74 | |||
}} |
Revision as of 19:08, 21 January 2014
Short description: | p1@C3orf74 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C3orf74_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | 0bp_to_NR_027331, uc010hmb.1_5end |
EntrezGene: | C3orf74 |
HGNC: | 34426 |
UniProt: | Q6ZRV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.64e-38 | 3 |
CD1a-positive Langerhans cell | 1.15e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.15e-15 | 2 |
epithelial cell of alimentary canal | 2.28e-13 | 20 |
endo-epithelial cell | 3.23e-11 | 42 |
bronchial epithelial cell | 9.90e-11 | 3 |
acinar cell of salivary gland | 1.20e-10 | 3 |
endodermal cell | 3.00e-08 | 58 |
Langerhans cell | 4.79e-07 | 5 |
keratinocyte | 5.08e-07 | 5 |
acinar cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.64e-38 | 3 |
cranial nerve II | 1.33e-29 | 1 |
cranial nerve | 1.33e-29 | 1 |
nerve trunk | 1.33e-29 | 1 |
nerve connecting eye with brain | 1.33e-29 | 1 |
nerve | 1.33e-29 | 1 |
retinal neural layer | 1.33e-29 | 1 |
presumptive neural retina | 1.33e-29 | 1 |
neural tissue | 1.54e-15 | 2 |
multi cell component structure | 1.54e-15 | 2 |
neuron projection bundle | 1.54e-15 | 2 |
epithelium of mucosa | 4.37e-15 | 8 |
gingiva | 4.37e-15 | 8 |
oral opening | 3.20e-12 | 22 |
lower respiratory tract epithelium | 9.90e-11 | 3 |
epithelium of bronchus | 9.90e-11 | 3 |
respiratory system epithelium | 8.81e-10 | 28 |
subdivision of head | 1.05e-09 | 49 |
mouth mucosa | 1.13e-09 | 13 |
mouth | 1.92e-09 | 29 |
stomodeum | 1.92e-09 | 29 |
head | 1.51e-08 | 56 |
layer of retina | 1.96e-08 | 4 |
anterior region of body | 9.25e-08 | 62 |
craniocervical region | 9.25e-08 | 62 |
orifice | 9.82e-08 | 36 |
bronchus | 6.04e-07 | 5 |