FFCP PHASE1:Hg19::chr6:41159227..41159256,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-109bp_to_AJ420509_5end | |||
|coexpression_cluster_id=C2610 | |||
|description=CAGE_peak_1_at_AJ420509_5end | |||
|id=chr6:41159227..41159256,- | |||
|ontology_enrichment_celltype=CL:0002032!2.10e-32!165;CL:0000837!2.10e-32!165;CL:0000037!1.68e-30!172;CL:0000566!1.68e-30!172;CL:0000988!4.86e-28!182;CL:0000763!6.18e-27!112;CL:0000049!6.18e-27!112;CL:0002057!3.76e-26!42;CL:0000860!5.77e-24!45;CL:0000738!1.94e-23!140;CL:0002087!6.24e-23!119;CL:0000766!4.11e-22!76;CL:0002031!1.07e-21!124;CL:0002194!7.06e-20!63;CL:0000576!7.06e-20!63;CL:0000040!7.06e-20!63;CL:0000559!7.06e-20!63;CL:0002009!4.70e-19!65;CL:0000839!7.13e-19!70;CL:0000557!7.26e-17!71;CL:0000775!1.75e-09!3;CL:0000945!1.35e-08!24;CL:0000826!1.35e-08!24;CL:0000134!1.36e-07!358;CL:0002320!3.27e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.26e-38;3!CL:0000094;1.20e-25;8!CL:0000081;9.43e-19;11!CL:0000860;9.45e-13;33!CL:0002057;9.45e-13;33!CL:0000473;4.53e-12;39!CL:0000234;4.53e-12;39!CL:0000766;2.00e-09;69!CL:0000763;5.38e-08;100!CL:0000771;1.16e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.26e-38,3;CL:0000094,1.24e-25,8;CL:0000766,2.97e-19,72;CL:0000081,9.66e-19,11;CL:0000738,1.03e-13,136;CL:0000763,1.88e-12,108;CL:0000049,1.88e-12,108;CL:0000473,5.32e-12,48;CL:0000234,5.32e-12,48;CL:0002032,2.42e-11,161;CL:0000837,2.42e-11,161;CL:0000037,8.37e-11,168;CL:0000860,3.05e-10,42;CL:0002057,3.05e-10,42;CL:0000988,3.59e-10,177;CL:0002194,1.74e-09,59;CL:0000576,1.74e-09,59;CL:0000040,1.74e-09,59;CL:0000559,1.74e-09,59;CL:0002009,3.69e-09,61;CL:0000839,1.97e-08,66;CL:0000557,2.68e-08,67;CL:0000771,1.20e-07,2;CL:0002087,1.43e-07,115;CL:0002031,3.27e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.94e-09;42 | |||
|ontology_enrichment_disease=DOID:1240!8.67e-09!39;DOID:2531!4.68e-07!51;DOID:0060083!4.68e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.01e-20!102;UBERON:0003061!1.01e-20!102;UBERON:0002193!3.01e-19!112;UBERON:0002371!3.31e-14!80;UBERON:0001474!9.45e-13!86;UBERON:0002405!2.95e-11!115;UBERON:0004765!6.80e-10!101;UBERON:0001434!6.80e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.49e-09,98;UBERON:0003061,4.49e-09,98;UBERON:0002193,3.81e-08,108;UBERON:0002371,2.95e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,1.43846196161075,1.0246428261164,0.47296445977717,0,0,1.35426486594342,0.376484679085209,0,0,0.306083892370903,0,0,0.659702600373432,1.19678194572979,0.852449501065388,0.290209238628584,0,0.622822248995575,1.25624332628372,0.521482918420201,0.434377689410233,1.21079900526674,0.368277635987565,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0,0,1.75996244461323,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0.512365278902701,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99205619157746,11.966458368161,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,0.822724546172388,0,0.540031437238115,3.96562588147135,0,0,0,0.185803175125719,0,0.0711418433484141,0,0.199579371432817,0,0.211673582723883,0,0.561594356226918,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79832133146375,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8126918544609,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.320568492303233 | |||
|short_description=p1@AJ420509 | |||
}} |
Revision as of 11:51, 22 January 2014
Short description: | p1@AJ420509 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AJ420509_5end |
Coexpression cluster: | C2610_smallcell_Neutrophils_Eosinophils_Whole_CD19_CD14_placenta |
Association with transcript: | -109bp_to_AJ420509_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.26e-38 | 3 |
granulocyte | 1.24e-25 | 8 |
myeloid leukocyte | 2.97e-19 | 72 |
blood cell | 9.66e-19 | 11 |
leukocyte | 1.03e-13 | 136 |
myeloid cell | 1.88e-12 | 108 |
common myeloid progenitor | 1.88e-12 | 108 |
defensive cell | 5.32e-12 | 48 |
phagocyte | 5.32e-12 | 48 |
hematopoietic oligopotent progenitor cell | 2.42e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.42e-11 | 161 |
hematopoietic stem cell | 8.37e-11 | 168 |
classical monocyte | 3.05e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.05e-10 | 42 |
hematopoietic cell | 3.59e-10 | 177 |
monopoietic cell | 1.74e-09 | 59 |
monocyte | 1.74e-09 | 59 |
monoblast | 1.74e-09 | 59 |
promonocyte | 1.74e-09 | 59 |
macrophage dendritic cell progenitor | 3.69e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.97e-08 | 66 |
granulocyte monocyte progenitor cell | 2.68e-08 | 67 |
eosinophil | 1.20e-07 | 2 |
nongranular leukocyte | 1.43e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 3.27e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.49e-09 | 98 |
blood island | 4.49e-09 | 98 |
hemolymphoid system | 3.81e-08 | 108 |
bone marrow | 2.95e-07 | 76 |