FFCP PHASE1:Hg19::chr10:105670919..105670936,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105670919..105670936,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr10:105670919..105670936,+ | |description=CAGE_peak_at_chr10:105670919..105670936,+ | ||
|id=chr10:105670919..105670936,+ | |id=chr10:105670919..105670936,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.11e-24!42;CL:0000860!1.90e-22!45;CL:0000766!1.84e-21!76;CL:0000775!1.64e-20!3;CL:0002194!5.02e-15!63;CL:0000576!5.02e-15!63;CL:0000040!5.02e-15!63;CL:0000559!5.02e-15!63;CL:0000738!1.09e-14!140;CL:0002009!1.71e-14!65;CL:0000763!1.62e-13!112;CL:0000049!1.62e-13!112;CL:0000094!1.74e-13!8;CL:0000839!2.71e-13!70;CL:0000557!4.50e-13!71;CL:0002032!7.23e-12!165;CL:0000837!7.23e-12!165;CL:0000037!3.18e-11!172;CL:0000566!3.18e-11!172;CL:0002087!7.81e-11!119;CL:0000988!2.17e-10!182;CL:0002031!2.85e-10!124;CL:0000081!7.64e-10!11;CL:0000623!2.03e-09!3;CL:0000825!2.03e-09!3;CL:0000810!7.45e-08!1;CL:0000895!7.45e-08!1;CL:0002436!7.45e-08!1;CL:0002427!7.45e-08!1;CL:0002428!7.45e-08!1;CL:0002429!7.45e-08!1;CL:0002433!7.45e-08!1;CL:0002431!7.45e-08!1;CL:0002432!7.45e-08!1 | |ontology_enrichment_celltype=CL:0002057!3.11e-24!42;CL:0000860!1.90e-22!45;CL:0000766!1.84e-21!76;CL:0000775!1.64e-20!3;CL:0002194!5.02e-15!63;CL:0000576!5.02e-15!63;CL:0000040!5.02e-15!63;CL:0000559!5.02e-15!63;CL:0000738!1.09e-14!140;CL:0002009!1.71e-14!65;CL:0000763!1.62e-13!112;CL:0000049!1.62e-13!112;CL:0000094!1.74e-13!8;CL:0000839!2.71e-13!70;CL:0000557!4.50e-13!71;CL:0002032!7.23e-12!165;CL:0000837!7.23e-12!165;CL:0000037!3.18e-11!172;CL:0000566!3.18e-11!172;CL:0002087!7.81e-11!119;CL:0000988!2.17e-10!182;CL:0002031!2.85e-10!124;CL:0000081!7.64e-10!11;CL:0000623!2.03e-09!3;CL:0000825!2.03e-09!3;CL:0000810!7.45e-08!1;CL:0000895!7.45e-08!1;CL:0002436!7.45e-08!1;CL:0002427!7.45e-08!1;CL:0002428!7.45e-08!1;CL:0002429!7.45e-08!1;CL:0002433!7.45e-08!1;CL:0002431!7.45e-08!1;CL:0002432!7.45e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.02e-39;33!CL:0002057;2.02e-39;33!CL:0000473;1.23e-28;39!CL:0000234;1.23e-28;39!CL:0000576;1.92e-22;48!CL:0000766;2.12e-11;69!CL:0000771;3.58e-10;2!CL:0000094;7.94e-10;8!CL:0000763;1.70e-09;100!CL:0000081;2.16e-07;11!CL:0000775;3.16e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.97e-34,42;CL:0002057,2.97e-34,42;CL:0000473,6.30e-30,48;CL:0000234,6.30e-30,48;CL:0000766,3.58e-29,72;CL:0002194,7.34e-24,59;CL:0000576,7.34e-24,59;CL:0000040,7.34e-24,59;CL:0000559,7.34e-24,59;CL:0002009,4.46e-23,61;CL:0000839,2.54e-21,66;CL:0000557,5.32e-21,67;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0002087,4.34e-12,115;CL:0000988,1.32e-11,177;CL:0002031,1.45e-11,120;CL:0000771,3.58e-10,2;CL:0000094,7.94e-10,8;CL:0000081,2.16e-07,11;CL:0000775,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-26;42!CL:0000049;5.19e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.44e-11!80;UBERON:0001474!2.21e-10!86;UBERON:0002390!7.51e-10!102;UBERON:0003061!7.51e-10!102;UBERON:0002193!9.75e-09!112;UBERON:0004765!1.73e-08!101;UBERON:0001434!1.73e-08!101;UBERON:0002405!1.93e-08!115;UBERON:0002363!1.99e-07!1;UBERON:0007647!1.99e-07!1;UBERON:0010115!1.99e-07!1 | |ontology_enrichment_uberon=UBERON:0002371!2.44e-11!80;UBERON:0001474!2.21e-10!86;UBERON:0002390!7.51e-10!102;UBERON:0003061!7.51e-10!102;UBERON:0002193!9.75e-09!112;UBERON:0004765!1.73e-08!101;UBERON:0001434!1.73e-08!101;UBERON:0002405!1.93e-08!115;UBERON:0002363!1.99e-07!1;UBERON:0007647!1.99e-07!1;UBERON:0010115!1.99e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-18,76;UBERON:0001474,4.07e-17,82;UBERON:0004765,1.45e-15,90;UBERON:0002405,4.72e-15,93;UBERON:0002390,2.90e-14,98;UBERON:0003061,2.90e-14,98;UBERON:0001434,5.70e-14,100;UBERON:0002193,6.65e-13,108;UBERON:0002204,3.82e-08,167 | |||
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|short_description=p@chr10:105670919..105670936,+ | |short_description=p@chr10:105670919..105670936,+ | ||
}} | }} |
Latest revision as of 10:03, 23 July 2015
Short description: | p@chr10:105670919..105670936, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105670919..105670936, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.97e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.97e-34 | 42 |
defensive cell | 6.30e-30 | 48 |
phagocyte | 6.30e-30 | 48 |
myeloid leukocyte | 3.58e-29 | 72 |
monopoietic cell | 7.34e-24 | 59 |
monocyte | 7.34e-24 | 59 |
monoblast | 7.34e-24 | 59 |
promonocyte | 7.34e-24 | 59 |
macrophage dendritic cell progenitor | 4.46e-23 | 61 |
myeloid lineage restricted progenitor cell | 2.54e-21 | 66 |
granulocyte monocyte progenitor cell | 5.32e-21 | 67 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
nongranular leukocyte | 4.34e-12 | 115 |
hematopoietic cell | 1.32e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.45e-11 | 120 |
eosinophil | 3.58e-10 | 2 |
granulocyte | 7.94e-10 | 8 |
blood cell | 2.16e-07 | 11 |
neutrophil | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-18 | 76 |
bone element | 4.07e-17 | 82 |
skeletal element | 1.45e-15 | 90 |
immune system | 4.72e-15 | 93 |
hematopoietic system | 2.90e-14 | 98 |
blood island | 2.90e-14 | 98 |
skeletal system | 5.70e-14 | 100 |
hemolymphoid system | 6.65e-13 | 108 |
musculoskeletal system | 3.82e-08 | 167 |