FFCP PHASE1:Hg19::chr10:54789856..54789877,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:54789856..54789877,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr10:54789856..54789877,- | |description=CAGE_peak_at_chr10:54789856..54789877,- | ||
|id=chr10:54789856..54789877,- | |id=chr10:54789856..54789877,- | ||
|ontology_enrichment_celltype=CL:1000497!8.50e-14!18;CL:0002518!8.50e-14!18;CL:1000507!2.14e-12!12;CL:1000494!2.14e-12!12;CL:1000449!6.64e-12!16;CL:0002149!4.09e-09!6;CL:0002255!4.09e-09!6;CL:0002681!7.56e-09!13;CL:0002584!7.56e-09!13;CL:0000066!1.95e-08!254 | |ontology_enrichment_celltype=CL:1000497!8.50e-14!18;CL:0002518!8.50e-14!18;CL:1000507!2.14e-12!12;CL:1000494!2.14e-12!12;CL:1000449!6.64e-12!16;CL:0002149!4.09e-09!6;CL:0002255!4.09e-09!6;CL:0002681!7.56e-09!13;CL:0002584!7.56e-09!13;CL:0000066!1.95e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.52e-19;10!CL:1000494;3.52e-19;10!CL:1000497;2.74e-18;17!CL:0002518;2.74e-18;17!CL:1000449;9.37e-18;15!CL:0002149;7.27e-16;6!CL:0002255;7.27e-16;6!CL:0002681;3.03e-12;12!CL:0002584;3.03e-12;12!CL:0000239;1.30e-08;3!CL:1000615;1.30e-08;3!CL:0002306;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.45e-19,10;CL:1000494,2.45e-19,10;CL:1000497,2.49e-18,17;CL:0002518,2.49e-18,17;CL:1000449,8.24e-18,15;CL:0002149,7.18e-16,6;CL:0002255,7.18e-16,6;CL:0002681,3.31e-12,12;CL:0002584,3.31e-12,12;CL:0000239,1.27e-08,3;CL:1000615,1.27e-08,3;CL:0002306,1.27e-08,3;CL:0000066,3.06e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.58e-12;10 | |||
|ontology_enrichment_disease=DOID:193!1.88e-14!29;DOID:120!6.23e-13!27;DOID:0050687!7.21e-11!143;DOID:305!8.96e-11!106;DOID:14566!3.73e-10!239;DOID:299!1.93e-09!25;DOID:162!3.62e-09!235;DOID:3001!4.09e-09!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;7.27e-16;6!DOID:299;3.00e-15;25!DOID:120;4.10e-13;27!DOID:193;5.46e-12;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,7.18e-16,6;DOID:299,2.96e-15,25;DOID:120,4.38e-13,27;DOID:193,5.81e-12,29;DOID:0050687,1.54e-10,143;DOID:305,4.32e-09,106;DOID:14566,5.47e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000489!1.82e-16!32;UBERON:0002113!1.57e-15!27;UBERON:0003918!1.57e-15!27;UBERON:0005095!1.57e-15!27;UBERON:0007687!1.57e-15!27;UBERON:0001008!1.52e-14!45;UBERON:0000080!6.83e-14!18;UBERON:0002120!6.83e-14!18;UBERON:0004875!6.83e-14!18;UBERON:0005721!6.83e-14!18;UBERON:0005754!6.83e-14!18;UBERON:0007297!6.83e-14!18;UBERON:0006554!1.03e-13!44;UBERON:0005156!1.37e-13!59;UBERON:0000990!1.37e-13!59;UBERON:0003133!1.41e-13!48;UBERON:0003064!3.92e-13!37;UBERON:0006555!5.14e-13!17;UBERON:0005103!5.14e-13!17;UBERON:0000083!5.14e-13!17;UBERON:0009201!5.14e-13!17;UBERON:0004819!5.14e-13!17;UBERON:0006553!5.14e-13!17;UBERON:0003074!5.14e-13!17;UBERON:0003060!5.14e-13!17;UBERON:0003887!1.55e-12!21;UBERON:0009773!2.14e-12!12;UBERON:0001231!2.14e-12!12;UBERON:0004810!2.14e-12!12;UBERON:0004876!5.10e-12!20;UBERON:0004211!6.64e-12!16;UBERON:0001285!6.64e-12!16;UBERON:0007684!6.64e-12!16;UBERON:0003220!6.64e-12!16;UBERON:0004208!6.64e-12!16;UBERON:0004175!1.36e-11!25;UBERON:0003134!1.73e-11!37;UBERON:0000474!1.73e-11!37;UBERON:0003100!7.08e-11!41;UBERON:0000058!9.15e-11!26;UBERON:0003886!1.53e-10!63;UBERON:0002553!2.42e-09!70;UBERON:0005795!4.10e-09!22;UBERON:0003975!5.22e-09!22;UBERON:0001225!7.56e-09!13;UBERON:0008987!7.56e-09!13;UBERON:0005172!8.69e-09!55;UBERON:0005173!8.69e-09!55;UBERON:0001851!2.73e-08!16;UBERON:0000995!3.73e-08!21;UBERON:0000464!9.36e-08!104;UBERON:0000353!1.96e-07!17;UBERON:0002417!3.24e-07!61;UBERON:0000916!3.24e-07!61;UBERON:0005177!8.36e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;5.44e-20;24!UBERON:0011143;5.44e-20;24!UBERON:0004211;3.52e-19;10!UBERON:0009773;3.52e-19;10!UBERON:0001231;3.52e-19;10!UBERON:0004810;3.52e-19;10!UBERON:0000489;3.42e-18;29!UBERON:0006555;9.37e-18;15!UBERON:0004819;9.37e-18;15!UBERON:0001285;9.37e-18;15!UBERON:0007684;9.37e-18;15!UBERON:0006554;1.91e-17;30!UBERON:0001008;1.91e-17;30!UBERON:0004175;5.22e-15;21!UBERON:0003134;6.56e-13;33!UBERON:0003975;1.45e-12;18!UBERON:0001225;3.03e-12;12!UBERON:0008987;3.03e-12;12!UBERON:0001851;4.66e-12;15!UBERON:0000474;1.05e-11;37!UBERON:0000995;5.45e-11;17!UBERON:0003100;1.67e-10;41!UBERON:0003133;3.07e-10;44!UBERON:0000353;1.69e-09;15!UBERON:0006853;1.30e-08;3!UBERON:0007685;1.30e-08;3!UBERON:0004134;1.30e-08;3!UBERON:0005156;6.47e-08;59!UBERON:0000990;6.47e-08;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.52e-21,26;UBERON:0003918,6.52e-21,26;UBERON:0011143,6.52e-21,26;UBERON:0005095,6.52e-21,26;UBERON:0007687,6.52e-21,26;UBERON:0006555,7.24e-20,16;UBERON:0004819,7.24e-20,16;UBERON:0001008,2.40e-19,48;UBERON:0004810,2.45e-19,10;UBERON:0000489,3.73e-19,31;UBERON:0006554,5.67e-18,47;UBERON:0004211,8.24e-18,15;UBERON:0009773,8.24e-18,15;UBERON:0001231,8.24e-18,15;UBERON:0001285,8.24e-18,15;UBERON:0007684,8.24e-18,15;UBERON:0004208,8.24e-18,15;UBERON:0005156,1.32e-14,59;UBERON:0000990,1.32e-14,59;UBERON:0004175,2.89e-14,25;UBERON:0003133,9.18e-14,48;UBERON:0003134,1.73e-13,37;UBERON:0000474,1.73e-13,37;UBERON:0003100,2.10e-13,41;UBERON:0001225,3.31e-12,12;UBERON:0008987,3.31e-12,12;UBERON:0005795,4.56e-12,22;UBERON:0001851,5.01e-12,15;UBERON:0003975,6.76e-12,22;UBERON:0000995,1.92e-10,21;UBERON:0005172,2.19e-10,54;UBERON:0005173,2.19e-10,54;UBERON:0000353,1.80e-09,15;UBERON:0002417,6.57e-09,60;UBERON:0000916,6.57e-09,60;UBERON:0006853,1.27e-08,3;UBERON:0007685,1.27e-08,3;UBERON:0004134,1.27e-08,3;UBERON:0001046,2.23e-07,19 | |||
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|short_description=p@chr10:54789856..54789877,- | |short_description=p@chr10:54789856..54789877,- | ||
}} | }} |
Latest revision as of 14:12, 23 July 2015
Short description: | p@chr10:54789856..54789877, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:54789856..54789877, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.45e-19 | 10 |
nephron tubule epithelial cell | 2.45e-19 | 10 |
kidney cell | 2.49e-18 | 17 |
kidney epithelial cell | 2.49e-18 | 17 |
epithelial cell of nephron | 8.24e-18 | 15 |
epithelial cell of uterus | 7.18e-16 | 6 |
stromal cell of endometrium | 7.18e-16 | 6 |
kidney cortical cell | 3.31e-12 | 12 |
renal cortical epithelial cell | 3.31e-12 | 12 |
brush border epithelial cell | 1.27e-08 | 3 |
kidney cortex tubule cell | 1.27e-08 | 3 |
epithelial cell of proximal tubule | 1.27e-08 | 3 |
epithelial cell | 3.06e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 7.18e-16 | 6 |
adenocarcinoma | 2.96e-15 | 25 |
female reproductive organ cancer | 4.38e-13 | 27 |
reproductive organ cancer | 5.81e-12 | 29 |
cell type cancer | 1.54e-10 | 143 |
carcinoma | 4.32e-09 | 106 |
disease of cellular proliferation | 5.47e-07 | 239 |