FFCP PHASE1:Hg19::chr10:74032614..74032639,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:74032614..74032639,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:74032614..74032639,- | |description=CAGE_peak_at_chr10:74032614..74032639,- | ||
|id=chr10:74032614..74032639,- | |id=chr10:74032614..74032639,- | ||
|ontology_enrichment_celltype=CL:0000860!1.84e-16!45;CL:0002057!2.28e-15!42;CL:0002194!3.16e-08!63;CL:0000576!3.16e-08!63;CL:0000040!3.16e-08!63;CL:0000559!3.16e-08!63;CL:0002009!1.13e-07!65 | |ontology_enrichment_celltype=CL:0000860!1.84e-16!45;CL:0002057!2.28e-15!42;CL:0002194!3.16e-08!63;CL:0000576!3.16e-08!63;CL:0000040!3.16e-08!63;CL:0000559!3.16e-08!63;CL:0002009!1.13e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.90e-59;33!CL:0002057;3.90e-59;33!CL:0000473;2.05e-39;39!CL:0000234;2.05e-39;39!CL:0000576;6.81e-25;48!CL:0000766;1.24e-14;69!CL:0000763;2.39e-08;100!CL:0000307;2.89e-08;3!CL:0002087;5.44e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.17e-49,42;CL:0002057,6.17e-49,42;CL:0000473,2.90e-42,48;CL:0000234,2.90e-42,48;CL:0002194,6.40e-33,59;CL:0000576,6.40e-33,59;CL:0000040,6.40e-33,59;CL:0000559,6.40e-33,59;CL:0002009,1.03e-31,61;CL:0000839,5.15e-29,66;CL:0000557,1.60e-28,67;CL:0000766,2.90e-26,72;CL:0000763,4.01e-16,108;CL:0000049,4.01e-16,108;CL:0002087,6.96e-15,115;CL:0002031,4.36e-14,120;CL:0000738,6.23e-12,136;CL:0002032,2.00e-09,161;CL:0000837,2.00e-09,161;CL:0000988,3.24e-09,177;CL:0000037,7.38e-09,168;CL:0000068,2.55e-08,3;CL:0000069,2.55e-08,3;CL:0000307,2.55e-08,3;CL:0000377,2.55e-08,3;CL:0002601,9.25e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-37;42!CL:0000377;2.89e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.15e-24,76;UBERON:0001474,1.46e-22,82;UBERON:0004765,3.45e-20,90;UBERON:0002405,2.11e-19,93;UBERON:0002390,3.38e-18,98;UBERON:0003061,3.38e-18,98;UBERON:0001434,9.47e-18,100;UBERON:0002193,4.01e-16,108;UBERON:0003081,1.59e-11,203;UBERON:0002204,4.63e-10,167;UBERON:0000926,1.19e-08,315;UBERON:0004120,1.19e-08,315;UBERON:0006603,1.19e-08,315 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,1.0007329835313,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0.242584061187816,2.09186133215116,1.23350366406548,0.619412741790207,2.58923153089935,4.61089271752381,3.31075121844019,4.82643953031266,3.87290810150296,4.06279459783025,0.188242339542605,0.545812300115692,0.674170453335254,5.81559395504715,15.7255223267286,10.8687311385837,0,1.59570926097305,0.426224750532694,12.4789972610291,8.5107783703671,11.2108004819203,0.251248665256743,1.0429658368404,1.73751075764093,3.63239701580021,13.2579948955523,12.9749578850763,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0.795285947051099,0.486634870302636,0,0,0,0,0.364295288292542,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,1.14734648299525,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0.494533858557114,0,0,0,0.125118519871964,0,0.877955241761676,0.30648779579902,0.901428353439581,0,0.179389635688862,0.427114777637135,0.211931901159562,0,0.309157587715317,0.772921620136887,0.18611685633159,0,0.584622030967192,0.757301322732344,0.460249493211497,0.646584227275248,0.710019185033229,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,1.15014803749563,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,2.27407504055985,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0.213455115606889,0.303127571446259,0,1.20956117331872,0.248107807818777,0.920771839728375,0,0,0,0.482561763430822,0,0,0,0,0,0,0.241718899183244,0,0.368323955743585,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0,0.165018999841176,0,0.650060246036521,0,0.193341436584244,0,0,0.413509717453592,0.107420244868274,0,0.170453254832202,0,0.495854746082934,0.192190067365106,0,0.708104465988849,0,0,0,0,0,0,0,0.572499546967965,0,0,0.190630193923825,0.255897791311334,0,0.636406495851874,0.78494864019923,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.409499734223957,0.282810863907425,0,0.551365343546124,0,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0,0.35667105148125,1.77380532035299,0,0,0,0.349934720244983,0.384888450902048,1.34060455107157,5.44454924306613,0.282431402330337,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,1.21537496453305,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0.063186579628488,2.25485129121739,0,0,0,0.313932918407225,0,0.284609546029793,0.277349346026277,0,0.195984794828755,0.174118413160805,0.17472666824203,0,0.0967563312890851,0.219267951258557,0.164230914106418,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0.39961921916426,0.288180834308212,0.114536596165916,0.857974989309823,0.576219191952599,0,0,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0.164831716762333,0.202210631562555,0.295282444544246,0.169346664131569,0,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0,0,0.332787154610557,0.0620964029413835,0.276697269872462,0,0,0.285465333544967,0,0,0,0,0.467426619694449,0,0,0.50313580350515,0,0.686520205190771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0.192619830407303,0,0.521988583930423,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0.419638523158333,0,0.76736622782191,0,0.157265941855896,0.436838552768056,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr10:74032614..74032639,- | |short_description=p@chr10:74032614..74032639,- | ||
}} | }} |
Latest revision as of 15:25, 23 July 2015
Short description: | p@chr10:74032614..74032639, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:74032614..74032639, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.17e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.17e-49 | 42 |
defensive cell | 2.90e-42 | 48 |
phagocyte | 2.90e-42 | 48 |
monopoietic cell | 6.40e-33 | 59 |
monocyte | 6.40e-33 | 59 |
monoblast | 6.40e-33 | 59 |
promonocyte | 6.40e-33 | 59 |
macrophage dendritic cell progenitor | 1.03e-31 | 61 |
myeloid lineage restricted progenitor cell | 5.15e-29 | 66 |
granulocyte monocyte progenitor cell | 1.60e-28 | 67 |
myeloid leukocyte | 2.90e-26 | 72 |
myeloid cell | 4.01e-16 | 108 |
common myeloid progenitor | 4.01e-16 | 108 |
nongranular leukocyte | 6.96e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 4.36e-14 | 120 |
leukocyte | 6.23e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.00e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-09 | 161 |
hematopoietic cell | 3.24e-09 | 177 |
hematopoietic stem cell | 7.38e-09 | 168 |
duct epithelial cell | 2.55e-08 | 3 |
branched duct epithelial cell | 2.55e-08 | 3 |
tracheal epithelial cell | 2.55e-08 | 3 |
tracheoblast | 2.55e-08 | 3 |
uterine smooth muscle cell | 9.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.15e-24 | 76 |
bone element | 1.46e-22 | 82 |
skeletal element | 3.45e-20 | 90 |
immune system | 2.11e-19 | 93 |
hematopoietic system | 3.38e-18 | 98 |
blood island | 3.38e-18 | 98 |
skeletal system | 9.47e-18 | 100 |
hemolymphoid system | 4.01e-16 | 108 |
lateral plate mesoderm | 1.59e-11 | 203 |
musculoskeletal system | 4.63e-10 | 167 |
mesoderm | 1.19e-08 | 315 |
mesoderm-derived structure | 1.19e-08 | 315 |
presumptive mesoderm | 1.19e-08 | 315 |