FFCP PHASE1:Hg19::chr10:74032614..74032639,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:74032614..74032639,-
|short_description=p@chr10:74032614..74032639,-
|description=CAGE_peak_at_chr10:74032614..74032639,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:74032614..74032639,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:74032614..74032639,- | |||
|id=chr10:74032614..74032639,- | |||
|ontology_enrichment_celltype=CL:0000860!1.84e-16!45;CL:0002057!2.28e-15!42;CL:0002194!3.16e-08!63;CL:0000576!3.16e-08!63;CL:0000040!3.16e-08!63;CL:0000559!3.16e-08!63;CL:0002009!1.13e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.90e-59;33!CL:0002057;3.90e-59;33!CL:0000473;2.05e-39;39!CL:0000234;2.05e-39;39!CL:0000576;6.81e-25;48!CL:0000766;1.24e-14;69!CL:0000763;2.39e-08;100!CL:0000307;2.89e-08;3!CL:0002087;5.44e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.17e-49,42;CL:0002057,6.17e-49,42;CL:0000473,2.90e-42,48;CL:0000234,2.90e-42,48;CL:0002194,6.40e-33,59;CL:0000576,6.40e-33,59;CL:0000040,6.40e-33,59;CL:0000559,6.40e-33,59;CL:0002009,1.03e-31,61;CL:0000839,5.15e-29,66;CL:0000557,1.60e-28,67;CL:0000766,2.90e-26,72;CL:0000763,4.01e-16,108;CL:0000049,4.01e-16,108;CL:0002087,6.96e-15,115;CL:0002031,4.36e-14,120;CL:0000738,6.23e-12,136;CL:0002032,2.00e-09,161;CL:0000837,2.00e-09,161;CL:0000988,3.24e-09,177;CL:0000037,7.38e-09,168;CL:0000068,2.55e-08,3;CL:0000069,2.55e-08,3;CL:0000307,2.55e-08,3;CL:0000377,2.55e-08,3;CL:0002601,9.25e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-37;42!CL:0000377;2.89e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.15e-24,76;UBERON:0001474,1.46e-22,82;UBERON:0004765,3.45e-20,90;UBERON:0002405,2.11e-19,93;UBERON:0002390,3.38e-18,98;UBERON:0003061,3.38e-18,98;UBERON:0001434,9.47e-18,100;UBERON:0002193,4.01e-16,108;UBERON:0003081,1.59e-11,203;UBERON:0002204,4.63e-10,167;UBERON:0000926,1.19e-08,315;UBERON:0004120,1.19e-08,315;UBERON:0006603,1.19e-08,315 | |||
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| ||
|short_description=p@chr10:74032614..74032639,- | |||
}} | }} |
Latest revision as of 15:25, 23 July 2015
Short description: | p@chr10:74032614..74032639, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:74032614..74032639, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.17e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.17e-49 | 42 |
defensive cell | 2.90e-42 | 48 |
phagocyte | 2.90e-42 | 48 |
monopoietic cell | 6.40e-33 | 59 |
monocyte | 6.40e-33 | 59 |
monoblast | 6.40e-33 | 59 |
promonocyte | 6.40e-33 | 59 |
macrophage dendritic cell progenitor | 1.03e-31 | 61 |
myeloid lineage restricted progenitor cell | 5.15e-29 | 66 |
granulocyte monocyte progenitor cell | 1.60e-28 | 67 |
myeloid leukocyte | 2.90e-26 | 72 |
myeloid cell | 4.01e-16 | 108 |
common myeloid progenitor | 4.01e-16 | 108 |
nongranular leukocyte | 6.96e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 4.36e-14 | 120 |
leukocyte | 6.23e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.00e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-09 | 161 |
hematopoietic cell | 3.24e-09 | 177 |
hematopoietic stem cell | 7.38e-09 | 168 |
duct epithelial cell | 2.55e-08 | 3 |
branched duct epithelial cell | 2.55e-08 | 3 |
tracheal epithelial cell | 2.55e-08 | 3 |
tracheoblast | 2.55e-08 | 3 |
uterine smooth muscle cell | 9.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.15e-24 | 76 |
bone element | 1.46e-22 | 82 |
skeletal element | 3.45e-20 | 90 |
immune system | 2.11e-19 | 93 |
hematopoietic system | 3.38e-18 | 98 |
blood island | 3.38e-18 | 98 |
skeletal system | 9.47e-18 | 100 |
hemolymphoid system | 4.01e-16 | 108 |
lateral plate mesoderm | 1.59e-11 | 203 |
musculoskeletal system | 4.63e-10 | 167 |
mesoderm | 1.19e-08 | 315 |
mesoderm-derived structure | 1.19e-08 | 315 |
presumptive mesoderm | 1.19e-08 | 315 |