FFCP PHASE1:Hg19::chr10:90973626..90973639,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90973626..90973639,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr10:90973626..90973639,- | |description=CAGE_peak_at_chr10:90973626..90973639,- | ||
|id=chr10:90973626..90973639,- | |id=chr10:90973626..90973639,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000840;7.51e-34;5!CL:0000235;1.24e-33;6!CL:0000990;7.49e-23;8!CL:0000451;7.67e-19;10!CL:0000473;1.11e-07;39!CL:0000234;1.11e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,7.51e-34,5;CL:0001029,7.51e-34,5;CL:0000235,1.47e-33,6;CL:0000990,7.49e-23,8;CL:0000451,7.68e-19,10;CL:0002194,6.73e-18,59;CL:0000576,6.73e-18,59;CL:0000040,6.73e-18,59;CL:0000559,6.73e-18,59;CL:0002009,2.55e-17,61;CL:0000839,5.05e-16,66;CL:0000557,8.70e-16,67;CL:0000766,1.06e-14,72;CL:0000763,8.43e-10,108;CL:0000049,8.43e-10,108;CL:0002087,3.38e-09,115;CL:0002031,8.27e-09,120;CL:0000738,9.40e-08,136;CL:0000473,1.03e-07,48;CL:0000234,1.03e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.59e-23;1!UBERON:0003056;1.35e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002308!2.67e-07!9;UBERON:0000125!2.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.59e-23;1!UBERON:0001785;4.59e-23;1!UBERON:0002464;4.59e-23;1!UBERON:0004904;4.59e-23;1!UBERON:0001021;4.59e-23;1!UBERON:0003714;3.06e-12;2!UBERON:0005162;3.06e-12;2!UBERON:0000122;3.06e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.28e-23,1;UBERON:0001785,3.28e-23,1;UBERON:0002464,3.28e-23,1;UBERON:0004904,3.28e-23,1;UBERON:0001021,3.28e-23,1;UBERON:0003902,3.28e-23,1;UBERON:0005425,3.28e-23,1;UBERON:0002371,6.22e-14,76;UBERON:0001474,6.44e-13,82;UBERON:0003714,2.59e-12,2;UBERON:0005162,2.59e-12,2;UBERON:0000122,2.59e-12,2;UBERON:0004765,9.03e-12,90;UBERON:0002405,2.17e-11,93;UBERON:0002390,8.29e-11,98;UBERON:0003061,8.29e-11,98;UBERON:0001434,1.37e-10,100;UBERON:0002193,8.43e-10,108;UBERON:0001781,8.61e-07,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.971680998056939,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,3.57002133020152,4.70150290708022,4.65352861816028,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0.246217006087397,0.702012795417713,1.0404181360211,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,2.43247561282381,0,12.6500363689819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0.101988829741982,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0.23806443146374,0,0,0.112131862580613,0,0.404234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.971680998056939,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,3.57002133020152,4.70150290708022,4.65352861816028,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0.246217006087397,0.702012795417713,1.0404181360211,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,2.43247561282381,0,12.6500363689819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0.101988829741982,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0.23806443146374,0,0,0.112131862580613,0,0.404234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr10:90973626..90973639,- | |short_description=p@chr10:90973626..90973639,- | ||
}} | }} |
Latest revision as of 16:33, 23 July 2015
Short description: | p@chr10:90973626..90973639, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90973626..90973639, - |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 7.51e-34 | 5 |
common dendritic progenitor | 7.51e-34 | 5 |
macrophage | 1.47e-33 | 6 |
conventional dendritic cell | 7.49e-23 | 8 |
dendritic cell | 7.68e-19 | 10 |
monopoietic cell | 6.73e-18 | 59 |
monocyte | 6.73e-18 | 59 |
monoblast | 6.73e-18 | 59 |
promonocyte | 6.73e-18 | 59 |
macrophage dendritic cell progenitor | 2.55e-17 | 61 |
myeloid lineage restricted progenitor cell | 5.05e-16 | 66 |
granulocyte monocyte progenitor cell | 8.70e-16 | 67 |
myeloid leukocyte | 1.06e-14 | 72 |
myeloid cell | 8.43e-10 | 108 |
common myeloid progenitor | 8.43e-10 | 108 |
nongranular leukocyte | 3.38e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.27e-09 | 120 |
leukocyte | 9.40e-08 | 136 |
defensive cell | 1.03e-07 | 48 |
phagocyte | 1.03e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.28e-23 | 1 |
cranial nerve | 3.28e-23 | 1 |
nerve trunk | 3.28e-23 | 1 |
nerve connecting eye with brain | 3.28e-23 | 1 |
nerve | 3.28e-23 | 1 |
retinal neural layer | 3.28e-23 | 1 |
presumptive neural retina | 3.28e-23 | 1 |
bone marrow | 6.22e-14 | 76 |
bone element | 6.44e-13 | 82 |
neural tissue | 2.59e-12 | 2 |
multi cell component structure | 2.59e-12 | 2 |
neuron projection bundle | 2.59e-12 | 2 |
skeletal element | 9.03e-12 | 90 |
immune system | 2.17e-11 | 93 |
hematopoietic system | 8.29e-11 | 98 |
blood island | 8.29e-11 | 98 |
skeletal system | 1.37e-10 | 100 |
hemolymphoid system | 8.43e-10 | 108 |
layer of retina | 8.61e-07 | 4 |