FFCP PHASE1:Hg19::chr10:98476465..98476484,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:98476465..98476484,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:98476465..98476484,+ | |description=CAGE_peak_at_chr10:98476465..98476484,+ | ||
|id=chr10:98476465..98476484,+ | |id=chr10:98476465..98476484,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.98e-86!42;CL:0000860!3.78e-80!45;CL:0002194!9.03e-55!63;CL:0000576!9.03e-55!63;CL:0000040!9.03e-55!63;CL:0000559!9.03e-55!63;CL:0002009!6.00e-53!65;CL:0000839!7.68e-49!70;CL:0000557!4.35e-48!71;CL:0000766!1.29e-44!76;CL:0002087!2.70e-39!119;CL:0000738!1.49e-32!140;CL:0002031!2.72e-32!124;CL:0000763!1.13e-28!112;CL:0000049!1.13e-28!112;CL:0000037!2.03e-25!172;CL:0000566!2.03e-25!172;CL:0000988!1.06e-23!182;CL:0002032!7.09e-23!165;CL:0000837!7.09e-23!165;CL:0000134!4.64e-09!358;CL:0002320!9.09e-09!365;CL:0000842!2.51e-08!3;CL:0000623!5.42e-08!3;CL:0000825!5.42e-08!3;CL:0000219!9.79e-08!390;CL:0000034!8.20e-07!444 | |ontology_enrichment_celltype=CL:0002057!2.98e-86!42;CL:0000860!3.78e-80!45;CL:0002194!9.03e-55!63;CL:0000576!9.03e-55!63;CL:0000040!9.03e-55!63;CL:0000559!9.03e-55!63;CL:0002009!6.00e-53!65;CL:0000839!7.68e-49!70;CL:0000557!4.35e-48!71;CL:0000766!1.29e-44!76;CL:0002087!2.70e-39!119;CL:0000738!1.49e-32!140;CL:0002031!2.72e-32!124;CL:0000763!1.13e-28!112;CL:0000049!1.13e-28!112;CL:0000037!2.03e-25!172;CL:0000566!2.03e-25!172;CL:0000988!1.06e-23!182;CL:0002032!7.09e-23!165;CL:0000837!7.09e-23!165;CL:0000134!4.64e-09!358;CL:0002320!9.09e-09!365;CL:0000842!2.51e-08!3;CL:0000623!5.42e-08!3;CL:0000825!5.42e-08!3;CL:0000219!9.79e-08!390;CL:0000034!8.20e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.57e-69;33!CL:0002057;7.57e-69;33!CL:0000473;3.32e-47;39!CL:0000234;3.32e-47;39!CL:0000576;4.74e-40;48!CL:0000766;3.30e-28;69!CL:0002087;1.62e-17;104!CL:0002393;6.55e-14;6!CL:0002397;6.55e-14;6!CL:0000763;3.18e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.43e-80,42;CL:0002057,9.43e-80,42;CL:0000473,2.01e-69,48;CL:0000234,2.01e-69,48;CL:0002194,5.89e-55,59;CL:0000576,5.89e-55,59;CL:0000040,5.89e-55,59;CL:0000559,5.89e-55,59;CL:0002009,4.34e-53,61;CL:0000839,6.61e-49,66;CL:0000557,3.83e-48,67;CL:0000766,1.22e-44,72;CL:0002087,6.32e-30,115;CL:0000763,6.82e-29,108;CL:0000049,6.82e-29,108;CL:0002031,1.02e-25,120;CL:0000738,7.47e-25,136;CL:0000037,1.55e-19,168;CL:0002032,2.07e-18,161;CL:0000837,2.07e-18,161;CL:0000988,2.20e-18,177;CL:0002393,1.87e-09,9;CL:0002397,1.87e-09,9;CL:0000134,1.62e-07,354;CL:0002320,2.66e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-56;42!UBERON:0005425;1.07e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.81e-42!80;UBERON:0001474!7.25e-39!86;UBERON:0002390!1.28e-37!102;UBERON:0003061!1.28e-37!102;UBERON:0002193!8.70e-34!112;UBERON:0004765!2.36e-32!101;UBERON:0001434!2.36e-32!101;UBERON:0002405!8.61e-28!115;UBERON:0002204!1.69e-17!167;UBERON:0003081!7.69e-15!216;UBERON:0002384!2.28e-08!375;UBERON:0000941!7.57e-07!1;UBERON:0004904!7.57e-07!1;UBERON:0002464!7.57e-07!1;UBERON:0001021!7.57e-07!1;UBERON:0001785!7.57e-07!1 | |ontology_enrichment_uberon=UBERON:0002371!3.81e-42!80;UBERON:0001474!7.25e-39!86;UBERON:0002390!1.28e-37!102;UBERON:0003061!1.28e-37!102;UBERON:0002193!8.70e-34!112;UBERON:0004765!2.36e-32!101;UBERON:0001434!2.36e-32!101;UBERON:0002405!8.61e-28!115;UBERON:0002204!1.69e-17!167;UBERON:0003081!7.69e-15!216;UBERON:0002384!2.28e-08!375;UBERON:0000941!7.57e-07!1;UBERON:0004904!7.57e-07!1;UBERON:0002464!7.57e-07!1;UBERON:0001021!7.57e-07!1;UBERON:0001785!7.57e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.07e-09;1!UBERON:0001785;1.07e-09;1!UBERON:0002464;1.07e-09;1!UBERON:0004904;1.07e-09;1!UBERON:0001021;1.07e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.63e-42,76;UBERON:0001474,6.69e-39,82;UBERON:0002390,1.34e-35,98;UBERON:0003061,1.34e-35,98;UBERON:0004765,3.25e-35,90;UBERON:0002405,5.40e-34,93;UBERON:0002193,4.76e-32,108;UBERON:0001434,2.00e-31,100;UBERON:0002204,1.23e-17,167;UBERON:0003081,1.27e-15,203;UBERON:0000941,1.17e-09,1;UBERON:0001785,1.17e-09,1;UBERON:0002464,1.17e-09,1;UBERON:0004904,1.17e-09,1;UBERON:0001021,1.17e-09,1;UBERON:0003902,1.17e-09,1;UBERON:0005425,1.17e-09,1;UBERON:0000926,7.06e-09,315;UBERON:0004120,7.06e-09,315;UBERON:0006603,7.06e-09,315;UBERON:0002384,5.21e-07,371 | |||
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|short_description=p@chr10:98476465..98476484,+ | |short_description=p@chr10:98476465..98476484,+ | ||
}} | }} |
Latest revision as of 17:10, 23 July 2015
Short description: | p@chr10:98476465..98476484, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:98476465..98476484, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.43e-80 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.43e-80 | 42 |
defensive cell | 2.01e-69 | 48 |
phagocyte | 2.01e-69 | 48 |
monopoietic cell | 5.89e-55 | 59 |
monocyte | 5.89e-55 | 59 |
monoblast | 5.89e-55 | 59 |
promonocyte | 5.89e-55 | 59 |
macrophage dendritic cell progenitor | 4.34e-53 | 61 |
myeloid lineage restricted progenitor cell | 6.61e-49 | 66 |
granulocyte monocyte progenitor cell | 3.83e-48 | 67 |
myeloid leukocyte | 1.22e-44 | 72 |
nongranular leukocyte | 6.32e-30 | 115 |
myeloid cell | 6.82e-29 | 108 |
common myeloid progenitor | 6.82e-29 | 108 |
hematopoietic lineage restricted progenitor cell | 1.02e-25 | 120 |
leukocyte | 7.47e-25 | 136 |
hematopoietic stem cell | 1.55e-19 | 168 |
hematopoietic oligopotent progenitor cell | 2.07e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-18 | 161 |
hematopoietic cell | 2.20e-18 | 177 |
intermediate monocyte | 1.87e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.87e-09 | 9 |
mesenchymal cell | 1.62e-07 | 354 |
connective tissue cell | 2.66e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.63e-42 | 76 |
bone element | 6.69e-39 | 82 |
hematopoietic system | 1.34e-35 | 98 |
blood island | 1.34e-35 | 98 |
skeletal element | 3.25e-35 | 90 |
immune system | 5.40e-34 | 93 |
hemolymphoid system | 4.76e-32 | 108 |
skeletal system | 2.00e-31 | 100 |
musculoskeletal system | 1.23e-17 | 167 |
lateral plate mesoderm | 1.27e-15 | 203 |
cranial nerve II | 1.17e-09 | 1 |
cranial nerve | 1.17e-09 | 1 |
nerve trunk | 1.17e-09 | 1 |
nerve connecting eye with brain | 1.17e-09 | 1 |
nerve | 1.17e-09 | 1 |
retinal neural layer | 1.17e-09 | 1 |
presumptive neural retina | 1.17e-09 | 1 |
mesoderm | 7.06e-09 | 315 |
mesoderm-derived structure | 7.06e-09 | 315 |
presumptive mesoderm | 7.06e-09 | 315 |
connective tissue | 5.21e-07 | 371 |