FFCP PHASE1:Hg19::chr11:110166030..110166034,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:110166030..110166034,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr11:110166030..110166034,- | |||
|id=chr11:110166030..110166034,- | |||
|ontology_enrichment_celltype=CL:0000860!1.26e-20!45;CL:0002057!8.12e-19!42;CL:0000839!2.68e-18!70;CL:0002194!6.48e-17!63;CL:0000576!6.48e-17!63;CL:0000040!6.48e-17!63;CL:0000559!6.48e-17!63;CL:0002009!6.84e-17!65;CL:0000557!6.98e-17!71;CL:0000766!2.21e-15!76;CL:0000763!2.39e-14!112;CL:0000049!2.39e-14!112;CL:0002031!2.60e-12!124;CL:0002087!3.94e-12!119;CL:0002032!1.38e-11!165;CL:0000837!1.38e-11!165;CL:0000738!2.01e-11!140;CL:0000037!2.21e-11!172;CL:0000566!2.21e-11!172;CL:0000988!6.57e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-44;33!CL:0002057;1.27e-44;33!CL:0000473;3.03e-34;39!CL:0000234;3.03e-34;39!CL:0000576;5.59e-28;48!CL:0000766;1.59e-18;69!CL:0002393;1.56e-11;6!CL:0002397;1.56e-11;6!CL:0002087;3.25e-09;104!CL:0002591;4.10e-08;1!CL:0000763;5.14e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.66e-56,42;CL:0002057,1.66e-56,42;CL:0000473,5.39e-49,48;CL:0000234,5.39e-49,48;CL:0002194,1.80e-38,59;CL:0000576,1.80e-38,59;CL:0000040,1.80e-38,59;CL:0000559,1.80e-38,59;CL:0002009,4.12e-37,61;CL:0000839,4.54e-34,66;CL:0000557,1.63e-33,67;CL:0000766,5.73e-31,72;CL:0000763,1.61e-19,108;CL:0000049,1.61e-19,108;CL:0002087,4.08e-18,115;CL:0002031,3.26e-17,120;CL:0000738,9.10e-15,136;CL:0002032,6.51e-12,161;CL:0000837,6.51e-12,161;CL:0000037,2.90e-11,168;CL:0000988,1.66e-10,177;CL:0002591,6.24e-08,1;CL:0002393,7.74e-08,9;CL:0002397,7.74e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-42;42!UBERON:0005425;1.75e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!4.86e-15!86;UBERON:0002371!9.86e-14!80;UBERON:0002390!9.93e-13!102;UBERON:0003061!9.93e-13!102;UBERON:0004765!8.69e-12!101;UBERON:0001434!8.69e-12!101;UBERON:0002193!3.76e-11!112;UBERON:0002405!7.93e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.75e-08;1!UBERON:0001785;1.75e-08;1!UBERON:0002464;1.75e-08;1!UBERON:0004904;1.75e-08;1!UBERON:0001021;1.75e-08;1!UBERON:0002134;4.10e-08;1!UBERON:0007195;4.10e-08;1!UBERON:0005208;4.10e-08;1!UBERON:0004145;4.10e-08;1!UBERON:0005946;4.10e-08;1!UBERON:0005965;4.10e-08;1!UBERON:0002078;4.10e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.98e-32,76;UBERON:0001474,8.27e-30,82;UBERON:0004765,7.51e-27,90;UBERON:0002405,7.17e-26,93;UBERON:0002390,2.27e-24,98;UBERON:0003061,2.27e-24,98;UBERON:0001434,8.24e-24,100;UBERON:0002193,8.85e-22,108;UBERON:0002204,2.84e-14,167;UBERON:0003081,2.31e-12,203;UBERON:0004145,5.94e-10,3;UBERON:0000941,1.41e-08,1;UBERON:0001785,1.41e-08,1;UBERON:0002464,1.41e-08,1;UBERON:0004904,1.41e-08,1;UBERON:0001021,1.41e-08,1;UBERON:0003902,1.41e-08,1;UBERON:0005425,1.41e-08,1;UBERON:0002134,3.10e-08,1;UBERON:0005208,3.10e-08,1;UBERON:0005946,3.10e-08,1;UBERON:0005965,3.10e-08,1;UBERON:0002078,3.10e-08,1;UBERON:0007195,7.16e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0,0.410623275218653,0.251085279189606,0.305653622991805,0.0821005894499457,0.236132343941038,0,0.767658796194425,0.309632246632152,0,0,0,0,0,0,9.97191735357379,5.41470008169383,3.68918480216948,0,0.971680998056939,0,0.436194716338694,0,0.485168122375632,1.16214518452842,2.05583944010913,2.16794459626573,1.1507695692886,0.512321413058201,0.945928919554341,7.92915065694223,2.5819387343353,6.77132432971709,0.752969358170419,0,0.224723484445085,1.83650335422542,0.641858054152187,2.55734850319616,1.64925650093358,0.199463657621632,0,1.7412554317715,1.13477044938228,2.4912889959823,0.502497330513487,0.521482918420201,0.65156653411535,1.21079900526674,2.20966581592539,1.89877432464531,0.422510572623884,0.425208599930087,0.628975936525128,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.493313713811028,0.276350017785848,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.189069634328136,0,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0,0.775250277507987,0,0,0,0,0,0,0,0.446498641420399,0.673588117878509,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0.570762456703795,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0,0,0,0.215627574859517,0.128343036279748,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0.343143423810856,0.206768026122887,0.647142602455851,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0.384417447767103,0,0,0,0.308419387605311,0,0.328508624055237,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0.522870902049801,0.256450125116389,0,0,0,0.183138929636687,0.330037999682352,0,0,0,0.193341436584244,0.154048617114644,0.460511024178389,0,0.214840489736547,0.290033387828457,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0.557409525377156,0.144269212976445,0,0,0.199579371432817,0,0.635020748171649,0,0,0.228234679033192,0.313359791546046,0,0.169291777801603,0.1605880751037,0.80719882876419,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0.334330152832435,0,0,0,0,0.994147647766298,0.281338832821026,0,0.16480387422676,0.422250816255987,0,0.276283915531148,0.251932747854276,0,0.123084805461069,0,0,0.537063524026827,0,0,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0,0,0,1.37897349296586,0.583209226766509,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0.46112780877612,0.269272933229316,0,0,0.0915975934018623,0,0,0,0.332423363800313,0.451191321234361,0,0.167821586975843,0.189753732724185,0,0,0,0.282706142867882,0.216388639742091,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0.134802265961354,0,0,0.182454789215666,0.19566461893209,0,0,1.20990716048664,0.61214552326098,0.126373159256976,0.150323419414493,0.414752765588989,0.664653872707185,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0.774050650312681,0.365446585430928,0.410577285266046,0.0969890164884194,0.176512253383001,0,0,0.596143835108969,0,0.195551382734803,0.240476460754601,0,0,0.144090417154106,0.343609788497747,0.857974989309823,0.14405479798815,0.248505071130865,0.235694034616795,0.135904206073614,0,0.203996435272644,0.288950589901519,0,0.273810757783986,0,0,0.262887354279314,0.279282401272254,0,1.43574604915363,0.199679000498991,0.429226048136571,0.446342914883745,0.201550417460179,0,0,0.236349546921671,0.164831716762333,0,0,0.0846733320657845,0,0.272406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| |||
|short_description=p@chr11:110166030..110166034,- | |||
}} |
Latest revision as of 18:00, 23 July 2015
Short description: | p@chr11:110166030..110166034, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:110166030..110166034, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.66e-56 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-56 | 42 |
defensive cell | 5.39e-49 | 48 |
phagocyte | 5.39e-49 | 48 |
monopoietic cell | 1.80e-38 | 59 |
monocyte | 1.80e-38 | 59 |
monoblast | 1.80e-38 | 59 |
promonocyte | 1.80e-38 | 59 |
macrophage dendritic cell progenitor | 4.12e-37 | 61 |
myeloid lineage restricted progenitor cell | 4.54e-34 | 66 |
granulocyte monocyte progenitor cell | 1.63e-33 | 67 |
myeloid leukocyte | 5.73e-31 | 72 |
myeloid cell | 1.61e-19 | 108 |
common myeloid progenitor | 1.61e-19 | 108 |
nongranular leukocyte | 4.08e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 3.26e-17 | 120 |
leukocyte | 9.10e-15 | 136 |
hematopoietic oligopotent progenitor cell | 6.51e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.51e-12 | 161 |
hematopoietic stem cell | 2.90e-11 | 168 |
hematopoietic cell | 1.66e-10 | 177 |
smooth muscle cell of the pulmonary artery | 6.24e-08 | 1 |
intermediate monocyte | 7.74e-08 | 9 |
CD14-positive, CD16-positive monocyte | 7.74e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.98e-32 | 76 |
bone element | 8.27e-30 | 82 |
skeletal element | 7.51e-27 | 90 |
immune system | 7.17e-26 | 93 |
hematopoietic system | 2.27e-24 | 98 |
blood island | 2.27e-24 | 98 |
skeletal system | 8.24e-24 | 100 |
hemolymphoid system | 8.85e-22 | 108 |
musculoskeletal system | 2.84e-14 | 167 |
lateral plate mesoderm | 2.31e-12 | 203 |
outflow tract | 5.94e-10 | 3 |
cranial nerve II | 1.41e-08 | 1 |
cranial nerve | 1.41e-08 | 1 |
nerve trunk | 1.41e-08 | 1 |
nerve connecting eye with brain | 1.41e-08 | 1 |
nerve | 1.41e-08 | 1 |
retinal neural layer | 1.41e-08 | 1 |
presumptive neural retina | 1.41e-08 | 1 |
tricuspid valve | 3.10e-08 | 1 |
right atrium valve | 3.10e-08 | 1 |
outflow tract of atrium | 3.10e-08 | 1 |
outflow part of right atrium | 3.10e-08 | 1 |
right cardiac atrium | 3.10e-08 | 1 |
stroma of bone marrow | 7.16e-08 | 1 |