FFCP PHASE1:Hg19::chr11:117883022..117883036,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:117883022..117883036,- | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr11:117883022..117883036,- | |description=CAGE_peak_at_chr11:117883022..117883036,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000738!4.22e-90!140;CL:0002057!2.62e-84!42;CL:0000766!6.23e-81!76;CL:0000860!8.15e-78!45;CL:0000037!1.27e-71!172;CL:0000566!1.27e-71!172;CL:0000557!3.54e-67!71;CL:0000988!1.36e-66!182;CL:0002009!8.93e-66!65;CL:0002032!1.96e-64!165;CL:0000837!1.96e-64!165;CL:0002031!1.41e-63!124;CL:0002087!4.67e-63!119;CL:0000839!4.33e-62!70;CL:0002194!9.66e-62!63;CL:0000576!9.66e-62!63;CL:0000040!9.66e-62!63;CL:0000559!9.66e-62!63;CL:0000763!8.44e-61!112;CL:0000049!8.44e-61!112;CL:0000134!6.09e-24!358;CL:0002320!4.29e-23!365;CL:0002393!2.91e-21!9;CL:0002397!2.91e-21!9;CL:0000219!4.14e-20!390;CL:0000094!8.26e-19!8;CL:0000048!1.51e-16!430;CL:0000034!4.08e-16!444;CL:0000723!4.83e-16!436;CL:0000081!3.35e-13!11;CL:0000451!2.54e-11!10;CL:0000842!2.84e-08!3;CL:0000775!3.94e-08!3;CL:0000990!3.99e-08!8;CL:0000767!9.22e-08!3;CL:0000063!1.02e-07!578;CL:0000875!1.32e-07!3;CL:0002396!1.32e-07!3;CL:0000453!2.55e-07!5;CL:0000784!3.96e-07!3;CL:0002371!5.05e-07!591;CL:0000838!6.60e-07!52;CL:0000623!7.34e-07!3;CL:0000825!7.34e-07!3 | |ontology_enrichment_celltype=CL:0000738!4.22e-90!140;CL:0002057!2.62e-84!42;CL:0000766!6.23e-81!76;CL:0000860!8.15e-78!45;CL:0000037!1.27e-71!172;CL:0000566!1.27e-71!172;CL:0000557!3.54e-67!71;CL:0000988!1.36e-66!182;CL:0002009!8.93e-66!65;CL:0002032!1.96e-64!165;CL:0000837!1.96e-64!165;CL:0002031!1.41e-63!124;CL:0002087!4.67e-63!119;CL:0000839!4.33e-62!70;CL:0002194!9.66e-62!63;CL:0000576!9.66e-62!63;CL:0000040!9.66e-62!63;CL:0000559!9.66e-62!63;CL:0000763!8.44e-61!112;CL:0000049!8.44e-61!112;CL:0000134!6.09e-24!358;CL:0002320!4.29e-23!365;CL:0002393!2.91e-21!9;CL:0002397!2.91e-21!9;CL:0000219!4.14e-20!390;CL:0000094!8.26e-19!8;CL:0000048!1.51e-16!430;CL:0000034!4.08e-16!444;CL:0000723!4.83e-16!436;CL:0000081!3.35e-13!11;CL:0000451!2.54e-11!10;CL:0000842!2.84e-08!3;CL:0000775!3.94e-08!3;CL:0000990!3.99e-08!8;CL:0000767!9.22e-08!3;CL:0000063!1.02e-07!578;CL:0000875!1.32e-07!3;CL:0002396!1.32e-07!3;CL:0000453!2.55e-07!5;CL:0000784!3.96e-07!3;CL:0002371!5.05e-07!591;CL:0000838!6.60e-07!52;CL:0000623!7.34e-07!3;CL:0000825!7.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.56e-75;33!CL:0002057;9.56e-75;33!CL:0000576;2.52e-60;48!CL:0000473;2.35e-51;39!CL:0000234;2.35e-51;39!CL:0000766;1.39e-44;69!CL:0000094;7.12e-29;8!CL:0002393;2.00e-23;6!CL:0002397;2.00e-23;6!CL:0000081;1.30e-20;11!CL:0000763;6.71e-20;100!CL:0002087;3.89e-18;104!CL:0000738;1.08e-15;136!CL:0000226;3.41e-12;3!CL:0000842;3.41e-12;3!CL:0000775;6.38e-12;3!CL:0000767;2.04e-11;3!CL:0000875;3.41e-11;3!CL:0002396;3.41e-11;3!CL:0000988;2.36e-09;177!CL:0000771;5.12e-09;2!CL:0001014;2.16e-08;2!CL:0001016;2.16e-08;2!CL:0000219;2.71e-07;193 | |ontology_enrichment_celltype_v019=CL:0000860;9.56e-75;33!CL:0002057;9.56e-75;33!CL:0000576;2.52e-60;48!CL:0000473;2.35e-51;39!CL:0000234;2.35e-51;39!CL:0000766;1.39e-44;69!CL:0000094;7.12e-29;8!CL:0002393;2.00e-23;6!CL:0002397;2.00e-23;6!CL:0000081;1.30e-20;11!CL:0000763;6.71e-20;100!CL:0002087;3.89e-18;104!CL:0000738;1.08e-15;136!CL:0000226;3.41e-12;3!CL:0000842;3.41e-12;3!CL:0000775;6.38e-12;3!CL:0000767;2.04e-11;3!CL:0000875;3.41e-11;3!CL:0002396;3.41e-11;3!CL:0000988;2.36e-09;177!CL:0000771;5.12e-09;2!CL:0001014;2.16e-08;2!CL:0001016;2.16e-08;2!CL:0000219;2.71e-07;193 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.02e-115,42;CL:0002057,6.02e-115,42;CL:0000766,1.44e-99,72;CL:0000473,2.07e-99,48;CL:0000234,2.07e-99,48;CL:0002009,3.47e-88,61;CL:0002194,5.46e-82,59;CL:0000576,5.46e-82,59;CL:0000040,5.46e-82,59;CL:0000559,5.46e-82,59;CL:0000557,1.54e-79,67;CL:0000839,1.98e-72,66;CL:0000763,1.65e-69,108;CL:0000049,1.65e-69,108;CL:0000738,3.14e-69,136;CL:0000037,5.07e-54,168;CL:0000988,9.99e-51,177;CL:0002087,4.67e-50,115;CL:0002032,2.29e-47,161;CL:0000837,2.29e-47,161;CL:0002031,6.71e-45,120;CL:0002393,9.19e-33,9;CL:0002397,9.19e-33,9;CL:0000094,7.26e-29,8;CL:0000081,1.31e-20,11;CL:0000134,8.34e-20,354;CL:0002320,3.35e-19,361;CL:0000219,4.51e-17,386;CL:0000048,1.82e-14,427;CL:0000723,4.16e-14,433;CL:0000034,1.21e-13,441;CL:0000226,3.54e-12,3;CL:0000842,3.54e-12,3;CL:0000775,5.94e-12,3;CL:0000767,2.27e-11,3;CL:0000875,4.00e-11,3;CL:0002396,4.00e-11,3;CL:0000771,5.02e-09,2;CL:0001014,2.25e-08,2;CL:0001016,2.25e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.90e-82;42!CL:0000049;3.45e-18;108 | |ontology_enrichment_development_v019=CL:0002057;2.90e-82;42!CL:0000049;3.45e-18;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.79e-60!102;UBERON:0003061!3.79e-60!102;UBERON:0002371!4.86e-58!80;UBERON:0002193!2.41e-53!112;UBERON:0001474!5.28e-53!86;UBERON:0004765!5.07e-43!101;UBERON:0001434!5.07e-43!101;UBERON:0002405!2.30e-39!115;UBERON:0002384!6.13e-22!375;UBERON:0002204!1.75e-20!167;UBERON:0003081!5.11e-20!216 | |ontology_enrichment_uberon=UBERON:0002390!3.79e-60!102;UBERON:0003061!3.79e-60!102;UBERON:0002371!4.86e-58!80;UBERON:0002193!2.41e-53!112;UBERON:0001474!5.28e-53!86;UBERON:0004765!5.07e-43!101;UBERON:0001434!5.07e-43!101;UBERON:0002405!2.30e-39!115;UBERON:0002384!6.13e-22!375;UBERON:0002204!1.75e-20!167;UBERON:0003081!5.11e-20!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.29e-69,76;UBERON:0002390,8.41e-67,98;UBERON:0003061,8.41e-67,98;UBERON:0001474,2.18e-63,82;UBERON:0002193,1.03e-59,108;UBERON:0004765,5.95e-57,90;UBERON:0002405,8.06e-55,93;UBERON:0001434,2.44e-50,100;UBERON:0003081,5.19e-27,203;UBERON:0002204,2.38e-26,167;UBERON:0002384,2.24e-18,371;UBERON:0000926,1.01e-13,315;UBERON:0004120,1.01e-13,315;UBERON:0006603,1.01e-13,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,6.68719270643137,3.0706351847777,4.4896675761662,0,0,0,0,0,0,45.427623499614,36.6996338870359,32.5516306073778,0,0.32389366601898,0,2.76256653681173,1.51150377475524,2.18325655069035,3.48643555358527,2.46700732813095,2.78735733805593,3.16461631554365,1.7931249457037,3.78371567821736,3.7922024881028,3.87290810150296,0,5.64727018627814,3.547779950752,7.86532195557796,8.26426509401437,7.06043859567406,4.47535988059329,1.31940520074686,0.997318288108159,0.852449501065388,7.83564944297177,1.70215567407342,9.34233373493363,0.75374599577023,3.65038042894141,3.04064382587163,3.63239701580021,5.89244217580104,13.9243450473989,12.0415513197807,17.4335525971336,13.4181533125361,13.8164216310189,10.0618518203809,5.46466994770072,4.27519115611873,3.58050018958362,3.10529061399878,0,0,0.889509253863555,0.426730222566507,1.20118796110804,0,0.661044872784862,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,2.8618874916641,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8985168820977,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,0.215627574859517,0.898401253958239,0,0,0,0,0,4.49404214368309,11.966458368161,8.28831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.09779314940704,15.747136659759,7.25747393063422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0,0,0,1.62009431171434,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52424285499351,6.1904156364636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0.490696182767533,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,6.68719270643137,3.0706351847777,4.4896675761662,0,0,0,0,0,0,45.427623499614,36.6996338870359,32.5516306073778,0,0.32389366601898,0,2.76256653681173,1.51150377475524,2.18325655069035,3.48643555358527,2.46700732813095,2.78735733805593,3.16461631554365,1.7931249457037,3.78371567821736,3.7922024881028,3.87290810150296,0,5.64727018627814,3.547779950752,7.86532195557796,8.26426509401437,7.06043859567406,4.47535988059329,1.31940520074686,0.997318288108159,0.852449501065388,7.83564944297177,1.70215567407342,9.34233373493363,0.75374599577023,3.65038042894141,3.04064382587163,3.63239701580021,5.89244217580104,13.9243450473989,12.0415513197807,17.4335525971336,13.4181533125361,13.8164216310189,10.0618518203809,5.46466994770072,4.27519115611873,3.58050018958362,3.10529061399878,0,0,0.889509253863555,0.426730222566507,1.20118796110804,0,0.661044872784862,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,2.8618874916641,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8985168820977,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,0.215627574859517,0.898401253958239,0,0,0,0,0,4.49404214368309,11.966458368161,8.28831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.09779314940704,15.747136659759,7.25747393063422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0,0,0,1.62009431171434,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52424285499351,6.1904156364636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0.490696182767533,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr11:117883022..117883036,- | |short_description=p@chr11:117883022..117883036,- | ||
}} | }} |
Latest revision as of 18:42, 23 July 2015
Short description: | p@chr11:117883022..117883036, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117883022..117883036, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.29e-69 | 76 |
hematopoietic system | 8.41e-67 | 98 |
blood island | 8.41e-67 | 98 |
bone element | 2.18e-63 | 82 |
hemolymphoid system | 1.03e-59 | 108 |
skeletal element | 5.95e-57 | 90 |
immune system | 8.06e-55 | 93 |
skeletal system | 2.44e-50 | 100 |
lateral plate mesoderm | 5.19e-27 | 203 |
musculoskeletal system | 2.38e-26 | 167 |
connective tissue | 2.24e-18 | 371 |
mesoderm | 1.01e-13 | 315 |
mesoderm-derived structure | 1.01e-13 | 315 |
presumptive mesoderm | 1.01e-13 | 315 |