FFCP PHASE1:Hg19::chr11:121990452..121990455,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:121990452..121990455,- | |||
|description=CAGE_peak_at_chr11:121990452..121990455,- | |description=CAGE_peak_at_chr11:121990452..121990455,- | ||
|id=chr11:121990452..121990455,- | |id=chr11:121990452..121990455,- | ||
|ontology_enrichment_celltype=CL:0000055!5.29e-19!180;CL:0000057!3.77e-15!75;CL:0002620!8.40e-07!23 | |ontology_enrichment_celltype=CL:0000055!5.29e-19!180;CL:0000057!3.77e-15!75;CL:0002620!8.40e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002556;1.19e-10;6!CL:0000515;4.27e-10;3!CL:0002379;6.40e-08;1!CL:0000056;8.85e-08;4!CL:0000057;1.03e-07;73 | |ontology_enrichment_celltype_v019=CL:0002556;1.19e-10;6!CL:0000515;4.27e-10;3!CL:0002379;6.40e-08;1!CL:0000056;8.85e-08;4!CL:0000057;1.03e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.72e-12,76;CL:0002556,1.14e-10,6;CL:0002379,7.59e-08,1;CL:0000515,9.97e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.43e-08;1!CL:0000515;8.85e-08;4!UBERON:0005062;1.03e-07;4!UBERON:0007284;1.03e-07;4 | |ontology_enrichment_development_v019=UBERON:0005425;2.43e-08;1!CL:0000515;8.85e-08;4!UBERON:0005062;1.03e-07;4!UBERON:0007284;1.03e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;1.46e-14;2!DOID:3620;6.40e-08;1!DOID:3565;6.40e-08;1!DOID:3571;6.40e-08;1 | |ontology_enrichment_disease_v019=DOID:3307;1.46e-14;2!DOID:3620;6.40e-08;1!DOID:3565;6.40e-08;1!DOID:3571;6.40e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3307,7.40e-15,2;DOID:3571,4.71e-08,1;DOID:3620,7.59e-08,1;DOID:3565,7.59e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.46e-14;2!UBERON:0001758;1.19e-10;6!UBERON:0003672;1.19e-10;6!UBERON:0003978;5.23e-10;3!UBERON:0000946;5.23e-10;3!UBERON:0003129;3.38e-09;7!UBERON:0002134;2.43e-08;1!UBERON:0000941;2.43e-08;1!UBERON:0001785;2.43e-08;1!UBERON:0002464;2.43e-08;1!UBERON:0004904;2.43e-08;1!UBERON:0001021;2.43e-08;1!UBERON:0005208;2.43e-08;1!UBERON:0004145;2.43e-08;1!UBERON:0005946;2.43e-08;1!UBERON:0005965;2.43e-08;1!UBERON:0002078;2.43e-08;1!UBERON:0002135;6.40e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0002133;1.46e-14;2!UBERON:0001758;1.19e-10;6!UBERON:0003672;1.19e-10;6!UBERON:0003978;5.23e-10;3!UBERON:0000946;5.23e-10;3!UBERON:0003129;3.38e-09;7!UBERON:0002134;2.43e-08;1!UBERON:0000941;2.43e-08;1!UBERON:0001785;2.43e-08;1!UBERON:0002464;2.43e-08;1!UBERON:0004904;2.43e-08;1!UBERON:0001021;2.43e-08;1!UBERON:0005208;2.43e-08;1!UBERON:0004145;2.43e-08;1!UBERON:0005946;2.43e-08;1!UBERON:0005965;2.43e-08;1!UBERON:0002078;2.43e-08;1!UBERON:0002135;6.40e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,2.53e-14,2;UBERON:0001758,1.14e-10,6;UBERON:0003672,1.14e-10,6;UBERON:0003978,7.51e-10,3;UBERON:0009751,7.51e-10,3;UBERON:0000946,7.51e-10,3;UBERON:0002523,7.51e-10,3;UBERON:0005983,7.51e-10,3;UBERON:0002165,7.51e-10,3;UBERON:0002062,7.51e-10,3;UBERON:0007280,7.51e-10,3;UBERON:0003129,3.25e-09,7;UBERON:0004797,3.34e-09,7;UBERON:0000941,2.04e-08,1;UBERON:0001785,2.04e-08,1;UBERON:0002464,2.04e-08,1;UBERON:0004904,2.04e-08,1;UBERON:0001021,2.04e-08,1;UBERON:0003902,2.04e-08,1;UBERON:0005425,2.04e-08,1;UBERON:0002134,2.71e-08,1;UBERON:0005208,2.71e-08,1;UBERON:0005946,2.71e-08,1;UBERON:0005965,2.71e-08,1;UBERON:0002078,2.71e-08,1;UBERON:0002135,9.94e-08,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0.486634870302636,0.756278537312543,0.443458794925128,0.43917392846563,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.357198913136319,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,1.85372853138506,0.573673241497627,0,0.560677600142307,2.1349799145941,0,0.311211035399766,0.269421344139376,0.326923806226917,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0,1.05691048779388,0.971237666208789,1.12360645361799,2.85815839756851,2.08818339430006,0.929932030581889,0,0.494533858557114,0,0,2.35670559535693,1.37630371859161,0,0.438977620880838,1.22595118319608,0.300476117813194,0,0,0,0,0.600182192168805,0.515262646192195,0.772921620136887,0,0.337552664482532,0.0974370051611986,1.7670364197088,0.920498986422993,0.161646056818812,1.06502877754984,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0.239624855491583,0,0,1.15825045334063,3.6985738059069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0,0.434418072340414,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0,0,0,0.546273504020151,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.193341436584244,0.770243085573222,0.15350367472613,1.51620229732984,0.859361958946189,0.290033387828457,0.852266274161009,0,0,0,0.510450849978337,0,0,0,0,0,0.532306030317022,0,0,0.715624433709956,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0.589062011728432,0,0,0,0.48763373908959,0.731140468893853,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0.563391205064483,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,1.26675244876796,0.19924798825107,0.276283915531148,0,0.306806047506464,0,0.622079175323615,0.539210106883961,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0.202203398942031,0,0.702793337176017,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.687944129886466,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0.451961481561065,1.09633539717401,0.596143835108969,0.126621591911757,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0.745515213392595,0,0.271808412147228,0.104602846312333,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,1.11712960508902,0.458320848023367,2.15361907373044,0,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0.236417121897595,0,2.85120908602398,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0.124980407962107,0,0,1.17632909849086,0,0,0.447764408660622,0,0.554805861502613,0,0,1.77962244319307,0.228840068396924,0.756154618816195,0,0,0.318593534327405,0,0.310525913752519,1.24411862352257,0.53168342911599,0,0.450772826991655,0.380805212168795,0,0,0.322231671127465,1.39210127963548,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0.895444205407437,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0.954013051960256,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,2.85538840518309,0,0.11796972334774,0,0,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.475788130837822,0,0,0.889851215136553,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0.173858272302579,2.40513409419076,0,0,0,0,0.828324005113957,0.766920642832419,0,0,0,0,0,0,0,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| ||
|short_description=p@chr11:121990452..121990455,- | |short_description=p@chr11:121990452..121990455,- | ||
}} | }} |
Latest revision as of 19:16, 23 July 2015
Short description: | p@chr11:121990452..121990455, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121990452..121990455, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.72e-12 | 76 |
fibroblast of periodontium | 1.14e-10 | 6 |
meningothelial cell | 7.59e-08 | 1 |
skeletal muscle myoblast | 9.97e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 2.53e-14 | 2 |
periodontium | 1.14e-10 | 6 |
dentition | 1.14e-10 | 6 |
valve | 7.51e-10 | 3 |
cardiac mesenchyme | 7.51e-10 | 3 |
cardial valve | 7.51e-10 | 3 |
tunica intima | 7.51e-10 | 3 |
heart layer | 7.51e-10 | 3 |
endocardium | 7.51e-10 | 3 |
endocardial cushion | 7.51e-10 | 3 |
presumptive endocardium | 7.51e-10 | 3 |
skull | 3.25e-09 | 7 |
blood vessel layer | 3.34e-09 | 7 |
cranial nerve II | 2.04e-08 | 1 |
cranial nerve | 2.04e-08 | 1 |
nerve trunk | 2.04e-08 | 1 |
nerve connecting eye with brain | 2.04e-08 | 1 |
nerve | 2.04e-08 | 1 |
retinal neural layer | 2.04e-08 | 1 |
presumptive neural retina | 2.04e-08 | 1 |
tricuspid valve | 2.71e-08 | 1 |
right atrium valve | 2.71e-08 | 1 |
outflow tract of atrium | 2.71e-08 | 1 |
outflow part of right atrium | 2.71e-08 | 1 |
right cardiac atrium | 2.71e-08 | 1 |
mitral valve | 9.94e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
teratoma | 7.40e-15 | 2 |
liver cancer | 4.71e-08 | 1 |
central nervous system cancer | 7.59e-08 | 1 |
meningioma | 7.59e-08 | 1 |