FFCP PHASE1:Hg19::chr11:129954441..129954466,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:129954441..129954466,+
|short_description=p@chr11:129954441..129954466,+
|description=CAGE_peak_at_chr11:129954441..129954466,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:129954441..129954466,+ | |||
|description=CAGE_peak_at_chr11:129954441..129954466,+ | |||
|id=chr11:129954441..129954466,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.51e-20!42;CL:0000860!4.14e-18!45;CL:0002009!2.05e-14!65;CL:0002194!3.22e-13!63;CL:0000576!3.22e-13!63;CL:0000040!3.22e-13!63;CL:0000559!3.22e-13!63;CL:0000839!2.76e-12!70;CL:0000766!2.95e-12!76;CL:0000557!4.43e-12!71;CL:0000763!1.96e-09!112;CL:0000049!1.96e-09!112;CL:0000738!2.28e-09!140;CL:0002031!3.08e-09!124;CL:0002087!4.04e-09!119;CL:0002393!4.92e-09!9;CL:0002397!4.92e-09!9;CL:0000037!7.02e-08!172;CL:0000566!7.02e-08!172;CL:0002032!2.13e-07!165;CL:0000837!2.13e-07!165;CL:0000988!6.28e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0002393;9.41e-20;6!CL:0002397;9.41e-20;6!CL:0000775;6.79e-18;3!CL:0000576;5.10e-14;48!CL:0000860;3.55e-12;33!CL:0002057;3.55e-12;33!CL:0000473;2.02e-11;39!CL:0000234;2.02e-11;39!CL:0000766;1.29e-09;69!CL:0000094;2.82e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.08e-23,42;CL:0002057,5.08e-23,42;CL:0000473,5.00e-20,48;CL:0000234,5.00e-20,48;CL:0000766,2.20e-19,72;CL:0000775,5.99e-18,3;CL:0002194,7.87e-16,59;CL:0000576,7.87e-16,59;CL:0000040,7.87e-16,59;CL:0000559,7.87e-16,59;CL:0002009,2.74e-15,61;CL:0000839,4.50e-14,66;CL:0000557,7.49e-14,67;CL:0002393,2.18e-13,9;CL:0002397,2.18e-13,9;CL:0000763,1.54e-12,108;CL:0000049,1.54e-12,108;CL:0000738,1.09e-09,136;CL:0002032,5.72e-08,161;CL:0000837,5.72e-08,161;CL:0002087,1.10e-07,115;CL:0000037,1.41e-07,168;CL:0002031,2.52e-07,120;CL:0000094,2.69e-07,8;CL:0000988,4.04e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.97e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;1.87e-07;2!DOID:4905;1.87e-07;2!DOID:3498;1.87e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.54e-07,2;DOID:4905,1.54e-07,2;DOID:3498,1.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.53e-09!80;UBERON:0002405!1.82e-08!115;UBERON:0001474!1.94e-08!86;UBERON:0002193!3.06e-07!112;UBERON:0002390!4.35e-07!102;UBERON:0003061!4.35e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.23e-07;2!UBERON:0002757;1.23e-07;2!UBERON:0010134;1.23e-07;2!UBERON:0005408;1.23e-07;2!UBERON:0001899;1.23e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.09e-12,76;UBERON:0001474,3.65e-11,82;UBERON:0004765,4.31e-10,90;UBERON:0002405,9.78e-10,93;UBERON:0002390,3.43e-09,98;UBERON:0003061,3.43e-09,98;UBERON:0001434,5.48e-09,100;UBERON:0002193,3.00e-08,108;UBERON:0001905,1.36e-07,2;UBERON:0002757,1.36e-07,2;UBERON:0010134,1.36e-07,2;UBERON:0005408,1.36e-07,2;UBERON:0001899,1.36e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.85870796139317,0,0.125542639594803,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.232401601740905,0,0,2.21598163412751,4.8130667392834,4.77423915574874,0,0,0,0.145398238779565,0.377875943688809,0,0.929716147622738,0,0,0,0,0.236482229888585,0,1.29096936716765,1.35426486594342,0.941211697713023,0.272906150057846,0.224723484445085,1.22433556948361,0.641858054152187,0.639337125799041,0.329851300186716,0,0.426224750532694,2.03146467040009,0,0.622822248995575,0.251248665256743,1.5644487552606,0.434377689410233,0,0.736555271975129,0.316462387440884,0.422510572623884,0.425208599930087,0.209658645508376,1.12328631146495,0.450530678524519,0.32145117339416,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0,0,0,0,0,0,0,0,0.541607727530031,0.128091319725675,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.130979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0.882926198829301,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0.646882724578552,0.513372145118994,0,0,0,0,0,3.74503511973591,2.99161459204025,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0.403599414382095,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,0.63337622438398,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0.227586896570999,0,0.236387681767936,0,0,0.173624994933292,0,0.482385754501632,0,0.884634079449797,0.886642856860642,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.391329237864179,1.45668227720456,0,0,0,0,0,0.103688191397247,0.664653872707185,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0.17472666824203,0.51595809741485,0,0,0,0,0,0,0,0.19871461170299,0.126621591911757,0.195551382734803,0,0,0.19980960958213,0.576361668616424,0.229073192331831,0.857974989309823,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0,0,0.817220436669454,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0.751145584238999,0,0.110929051536852,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.358177682162975,0,0,0,0,0.168942440653073,0,0,0,0.829550616910385,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0.169732529954025,0.425149840203366,0.247871528518004,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0.798169295285756,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0,0.327543835020193,0,0.270150338473579,0,0.413373593002368,0.19024743058172,0.546974809018219,0,0,0.351742488719241,0.127762427639595,0,2.01770233331294,0,0.455324382702595,0,0,0,0.135939465953663,0.197318320688547,0.236387681767936,0.444925607568277,0,0.314231179832004,0.560544326627578,0,0.215927591218621,0,0.142953088353313,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0.236664001461131,0,0,0,0,0,0.447421727191169,0.098150233615243,0,0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| ||
|short_description=p@chr11:129954441..129954466,+ | |||
}} | }} |
Latest revision as of 19:58, 23 July 2015
Short description: | p@chr11:129954441..129954466, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:129954441..129954466, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.08e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.08e-23 | 42 |
defensive cell | 5.00e-20 | 48 |
phagocyte | 5.00e-20 | 48 |
myeloid leukocyte | 2.20e-19 | 72 |
neutrophil | 5.99e-18 | 3 |
monopoietic cell | 7.87e-16 | 59 |
monocyte | 7.87e-16 | 59 |
monoblast | 7.87e-16 | 59 |
promonocyte | 7.87e-16 | 59 |
macrophage dendritic cell progenitor | 2.74e-15 | 61 |
myeloid lineage restricted progenitor cell | 4.50e-14 | 66 |
granulocyte monocyte progenitor cell | 7.49e-14 | 67 |
intermediate monocyte | 2.18e-13 | 9 |
CD14-positive, CD16-positive monocyte | 2.18e-13 | 9 |
myeloid cell | 1.54e-12 | 108 |
common myeloid progenitor | 1.54e-12 | 108 |
leukocyte | 1.09e-09 | 136 |
hematopoietic oligopotent progenitor cell | 5.72e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.72e-08 | 161 |
nongranular leukocyte | 1.10e-07 | 115 |
hematopoietic stem cell | 1.41e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 2.52e-07 | 120 |
granulocyte | 2.69e-07 | 8 |
hematopoietic cell | 4.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.09e-12 | 76 |
bone element | 3.65e-11 | 82 |
skeletal element | 4.31e-10 | 90 |
immune system | 9.78e-10 | 93 |
hematopoietic system | 3.43e-09 | 98 |
blood island | 3.43e-09 | 98 |
skeletal system | 5.48e-09 | 100 |
hemolymphoid system | 3.00e-08 | 108 |
pineal body | 1.36e-07 | 2 |
regional part of epithalamus | 1.36e-07 | 2 |
secretory circumventricular organ | 1.36e-07 | 2 |
circumventricular organ | 1.36e-07 | 2 |
epithalamus | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.54e-07 | 2 |
pancreatic carcinoma | 1.54e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.54e-07 | 2 |