FFCP PHASE1:Hg19::chr12:125399495..125399515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:125399495..125399515,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr12:125399495..125399515,+ | |description=CAGE_peak_at_chr12:125399495..125399515,+ | ||
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|ontology_enrichment_celltype=CL:0000860!5.75e-38!45;CL:0002057!3.63e-35!42;CL:0000839!1.16e-24!70;CL:0000766!3.72e-24!76;CL:0000557!5.91e-23!71;CL:0002009!3.35e-22!65;CL:0002194!5.78e-22!63;CL:0000576!5.78e-22!63;CL:0000040!5.78e-22!63;CL:0000559!5.78e-22!63;CL:0000763!2.51e-17!112;CL:0000049!2.51e-17!112;CL:0002031!4.94e-14!124;CL:0000738!7.82e-14!140;CL:0002032!2.92e-11!165;CL:0000837!2.92e-11!165;CL:0002087!9.57e-11!119;CL:0000037!4.44e-10!172;CL:0000566!4.44e-10!172;CL:0000988!4.44e-09!182 | |ontology_enrichment_celltype=CL:0000860!5.75e-38!45;CL:0002057!3.63e-35!42;CL:0000839!1.16e-24!70;CL:0000766!3.72e-24!76;CL:0000557!5.91e-23!71;CL:0002009!3.35e-22!65;CL:0002194!5.78e-22!63;CL:0000576!5.78e-22!63;CL:0000040!5.78e-22!63;CL:0000559!5.78e-22!63;CL:0000763!2.51e-17!112;CL:0000049!2.51e-17!112;CL:0002031!4.94e-14!124;CL:0000738!7.82e-14!140;CL:0002032!2.92e-11!165;CL:0000837!2.92e-11!165;CL:0002087!9.57e-11!119;CL:0000037!4.44e-10!172;CL:0000566!4.44e-10!172;CL:0000988!4.44e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.94e-97;33!CL:0002057;8.94e-97;33!CL:0000473;2.39e-65;39!CL:0000234;2.39e-65;39!CL:0000576;1.42e-43;48!CL:0000766;1.30e-24;69!CL:0000763;6.20e-12;100!CL:0002087;8.65e-12;104!CL:0000228;8.18e-07;1!CL:0002372;8.18e-07;1!CL:0000738;9.83e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;8.94e-97;33!CL:0002057;8.94e-97;33!CL:0000473;2.39e-65;39!CL:0000234;2.39e-65;39!CL:0000576;1.42e-43;48!CL:0000766;1.30e-24;69!CL:0000763;6.20e-12;100!CL:0002087;8.65e-12;104!CL:0000228;8.18e-07;1!CL:0002372;8.18e-07;1!CL:0000738;9.83e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.06e-82,42;CL:0002057,6.06e-82,42;CL:0000473,4.55e-71,48;CL:0000234,4.55e-71,48;CL:0002194,7.76e-56,59;CL:0000576,7.76e-56,59;CL:0000040,7.76e-56,59;CL:0000559,7.76e-56,59;CL:0002009,7.18e-54,61;CL:0000839,1.81e-49,66;CL:0000557,1.15e-48,67;CL:0000766,5.58e-45,72;CL:0000763,2.05e-28,108;CL:0000049,2.05e-28,108;CL:0002087,2.19e-26,115;CL:0002031,4.42e-25,120;CL:0000738,1.52e-21,136;CL:0002032,2.06e-17,161;CL:0000837,2.06e-17,161;CL:0000037,1.79e-16,168;CL:0000988,2.23e-15,177;CL:0000228,7.73e-07,1;CL:0002372,7.73e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;4.24e-62;42!CL:0000049;5.73e-09;108 | |ontology_enrichment_development_v019=CL:0002057;4.24e-62;42!CL:0000049;5.73e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.07e-20!80;UBERON:0001474!2.77e-19!86;UBERON:0002390!2.09e-17!102;UBERON:0003061!2.09e-17!102;UBERON:0002193!1.03e-16!112;UBERON:0002405!1.97e-14!115;UBERON:0004765!4.50e-14!101;UBERON:0001434!4.50e-14!101;UBERON:0003081!1.87e-08!216;UBERON:0002204!4.91e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!1.07e-20!80;UBERON:0001474!2.77e-19!86;UBERON:0002390!2.09e-17!102;UBERON:0003061!2.09e-17!102;UBERON:0002193!1.03e-16!112;UBERON:0002405!1.97e-14!115;UBERON:0004765!4.50e-14!101;UBERON:0001434!4.50e-14!101;UBERON:0003081!1.87e-08!216;UBERON:0002204!4.91e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;8.18e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000996;8.18e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.24e-42,76;UBERON:0001474,6.11e-39,82;UBERON:0002390,1.41e-37,98;UBERON:0003061,1.41e-37,98;UBERON:0004765,4.61e-35,90;UBERON:0002405,8.88e-34,93;UBERON:0002193,1.25e-33,108;UBERON:0001434,4.45e-31,100;UBERON:0002204,3.42e-18,167;UBERON:0003081,7.81e-17,203;UBERON:0000926,9.94e-11,315;UBERON:0004120,9.94e-11,315;UBERON:0006603,9.94e-11,315;UBERON:0000996,8.67e-07,1 | |||
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| ||
|short_description=p@chr12:125399495..125399515,+ | |short_description=p@chr12:125399495..125399515,+ | ||
}} | }} |
Latest revision as of 06:29, 24 July 2015
Short description: | p@chr12:125399495..125399515, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:125399495..125399515, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.06e-82 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.06e-82 | 42 |
defensive cell | 4.55e-71 | 48 |
phagocyte | 4.55e-71 | 48 |
monopoietic cell | 7.76e-56 | 59 |
monocyte | 7.76e-56 | 59 |
monoblast | 7.76e-56 | 59 |
promonocyte | 7.76e-56 | 59 |
macrophage dendritic cell progenitor | 7.18e-54 | 61 |
myeloid lineage restricted progenitor cell | 1.81e-49 | 66 |
granulocyte monocyte progenitor cell | 1.15e-48 | 67 |
myeloid leukocyte | 5.58e-45 | 72 |
myeloid cell | 2.05e-28 | 108 |
common myeloid progenitor | 2.05e-28 | 108 |
nongranular leukocyte | 2.19e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 4.42e-25 | 120 |
leukocyte | 1.52e-21 | 136 |
hematopoietic oligopotent progenitor cell | 2.06e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-17 | 161 |
hematopoietic stem cell | 1.79e-16 | 168 |
hematopoietic cell | 2.23e-15 | 177 |
multinucleate cell | 7.73e-07 | 1 |
myotube | 7.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.24e-42 | 76 |
bone element | 6.11e-39 | 82 |
hematopoietic system | 1.41e-37 | 98 |
blood island | 1.41e-37 | 98 |
skeletal element | 4.61e-35 | 90 |
immune system | 8.88e-34 | 93 |
hemolymphoid system | 1.25e-33 | 108 |
skeletal system | 4.45e-31 | 100 |
musculoskeletal system | 3.42e-18 | 167 |
lateral plate mesoderm | 7.81e-17 | 203 |
mesoderm | 9.94e-11 | 315 |
mesoderm-derived structure | 9.94e-11 | 315 |
presumptive mesoderm | 9.94e-11 | 315 |
vagina | 8.67e-07 | 1 |