FFCP PHASE1:Hg19::chr12:1704640..1704649,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:1704640..1704649,+ | |||
|coexpression_cluster_id=C646 | |coexpression_cluster_id=C646 | ||
|description=CAGE_peak_at_chr12:1704640..1704649,+ | |description=CAGE_peak_at_chr12:1704640..1704649,+ | ||
|id=chr12:1704640..1704649,+ | |id=chr12:1704640..1704649,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.36e-46!42;CL:0000860!8.40e-43!45;CL:0000839!6.01e-32!70;CL:0000557!2.13e-31!71;CL:0000766!2.34e-31!76;CL:0002194!4.62e-28!63;CL:0000576!4.62e-28!63;CL:0000040!4.62e-28!63;CL:0000559!4.62e-28!63;CL:0002009!5.26e-27!65;CL:0000763!1.96e-20!112;CL:0000049!1.96e-20!112;CL:0002031!6.01e-15!124;CL:0000738!1.15e-13!140;CL:0002087!6.42e-12!119;CL:0002032!1.80e-11!165;CL:0000837!1.80e-11!165;CL:0000037!1.04e-10!172;CL:0000566!1.04e-10!172;CL:0000988!1.00e-09!182;CL:0002274!4.15e-07!5;CL:0000457!4.15e-07!5;CL:0002191!4.15e-07!5;CL:0000097!4.15e-07!5;CL:0000831!4.15e-07!5;CL:0002028!4.15e-07!5 | |ontology_enrichment_celltype=CL:0002057!2.36e-46!42;CL:0000860!8.40e-43!45;CL:0000839!6.01e-32!70;CL:0000557!2.13e-31!71;CL:0000766!2.34e-31!76;CL:0002194!4.62e-28!63;CL:0000576!4.62e-28!63;CL:0000040!4.62e-28!63;CL:0000559!4.62e-28!63;CL:0002009!5.26e-27!65;CL:0000763!1.96e-20!112;CL:0000049!1.96e-20!112;CL:0002031!6.01e-15!124;CL:0000738!1.15e-13!140;CL:0002087!6.42e-12!119;CL:0002032!1.80e-11!165;CL:0000837!1.80e-11!165;CL:0000037!1.04e-10!172;CL:0000566!1.04e-10!172;CL:0000988!1.00e-09!182;CL:0002274!4.15e-07!5;CL:0000457!4.15e-07!5;CL:0002191!4.15e-07!5;CL:0000097!4.15e-07!5;CL:0000831!4.15e-07!5;CL:0002028!4.15e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.81e-61;33!CL:0002057;3.81e-61;33!CL:0000473;4.31e-44;39!CL:0000234;4.31e-44;39!CL:0000576;8.72e-28;48!CL:0000766;2.72e-22;69!CL:0000097;1.61e-18;5!CL:0000763;6.27e-11;100!CL:0000163;1.50e-10;9!CL:0002087;1.53e-07;104!CL:0000738;5.65e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.91e-51,42;CL:0002057,5.91e-51,42;CL:0000766,1.23e-46,72;CL:0000839,1.73e-45,66;CL:0000557,8.75e-45,67;CL:0000473,2.51e-44,48;CL:0000234,2.51e-44,48;CL:0002194,4.89e-35,59;CL:0000576,4.89e-35,59;CL:0000040,4.89e-35,59;CL:0000559,4.89e-35,59;CL:0002009,7.73e-34,61;CL:0000763,1.98e-30,108;CL:0000049,1.98e-30,108;CL:0002031,4.19e-24,120;CL:0000738,1.07e-23,136;CL:0002032,1.22e-19,161;CL:0000837,1.22e-19,161;CL:0000037,1.02e-18,168;CL:0000097,1.88e-18,5;CL:0002028,1.88e-18,5;CL:0000988,1.22e-17,177;CL:0002087,4.75e-17,115;CL:0000163,1.63e-10,9;CL:0000134,1.85e-07,354;CL:0002320,2.94e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.38e-34;42!CL:0000049;7.55e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.55e-27!80;UBERON:0001474!1.10e-24!86;UBERON:0002390!5.71e-23!102;UBERON:0003061!5.71e-23!102;UBERON:0004765!1.23e-21!101;UBERON:0001434!1.23e-21!101;UBERON:0002193!3.06e-20!112;UBERON:0002405!1.63e-19!115;UBERON:0001896!1.83e-10!3;UBERON:0005290!1.83e-10!3;UBERON:0010096!1.83e-10!3;UBERON:0002204!3.05e-10!167;UBERON:0003081!1.91e-08!216;UBERON:0007023!3.76e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!4.55e-27!80;UBERON:0001474!1.10e-24!86;UBERON:0002390!5.71e-23!102;UBERON:0003061!5.71e-23!102;UBERON:0004765!1.23e-21!101;UBERON:0001434!1.23e-21!101;UBERON:0002193!3.06e-20!112;UBERON:0002405!1.63e-19!115;UBERON:0001896!1.83e-10!3;UBERON:0005290!1.83e-10!3;UBERON:0010096!1.83e-10!3;UBERON:0002204!3.05e-10!167;UBERON:0003081!1.91e-08!216;UBERON:0007023!3.76e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;4.01e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.84e-39,76;UBERON:0001474,2.91e-36,82;UBERON:0004765,7.32e-33,90;UBERON:0002405,9.78e-32,93;UBERON:0002390,5.21e-30,98;UBERON:0003061,5.21e-30,98;UBERON:0001434,2.29e-29,100;UBERON:0002193,4.96e-27,108;UBERON:0002204,1.20e-16,167;UBERON:0003081,3.03e-13,203;UBERON:0000996,2.68e-11,1;UBERON:0000926,1.04e-08,315;UBERON:0004120,1.04e-08,315;UBERON:0006603,1.04e-08,315;UBERON:0002384,5.53e-07,371 | |||
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| ||
|short_description=p@chr12:1704640..1704649,+ | |short_description=p@chr12:1704640..1704649,+ | ||
}} | }} |
Latest revision as of 07:18, 24 July 2015
Short description: | p@chr12:1704640..1704649, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:1704640..1704649, + |
Coexpression cluster: | C646_CD14_Mast_vagina_thymus_MCF7_immature_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.91e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.91e-51 | 42 |
myeloid leukocyte | 1.23e-46 | 72 |
myeloid lineage restricted progenitor cell | 1.73e-45 | 66 |
granulocyte monocyte progenitor cell | 8.75e-45 | 67 |
defensive cell | 2.51e-44 | 48 |
phagocyte | 2.51e-44 | 48 |
monopoietic cell | 4.89e-35 | 59 |
monocyte | 4.89e-35 | 59 |
monoblast | 4.89e-35 | 59 |
promonocyte | 4.89e-35 | 59 |
macrophage dendritic cell progenitor | 7.73e-34 | 61 |
myeloid cell | 1.98e-30 | 108 |
common myeloid progenitor | 1.98e-30 | 108 |
hematopoietic lineage restricted progenitor cell | 4.19e-24 | 120 |
leukocyte | 1.07e-23 | 136 |
hematopoietic oligopotent progenitor cell | 1.22e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-19 | 161 |
hematopoietic stem cell | 1.02e-18 | 168 |
mast cell | 1.88e-18 | 5 |
basophil mast progenitor cell | 1.88e-18 | 5 |
hematopoietic cell | 1.22e-17 | 177 |
nongranular leukocyte | 4.75e-17 | 115 |
endocrine cell | 1.63e-10 | 9 |
mesenchymal cell | 1.85e-07 | 354 |
connective tissue cell | 2.94e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.84e-39 | 76 |
bone element | 2.91e-36 | 82 |
skeletal element | 7.32e-33 | 90 |
immune system | 9.78e-32 | 93 |
hematopoietic system | 5.21e-30 | 98 |
blood island | 5.21e-30 | 98 |
skeletal system | 2.29e-29 | 100 |
hemolymphoid system | 4.96e-27 | 108 |
musculoskeletal system | 1.20e-16 | 167 |
lateral plate mesoderm | 3.03e-13 | 203 |
vagina | 2.68e-11 | 1 |
mesoderm | 1.04e-08 | 315 |
mesoderm-derived structure | 1.04e-08 | 315 |
presumptive mesoderm | 1.04e-08 | 315 |
connective tissue | 5.53e-07 | 371 |