FFCP PHASE1:Hg19::chr12:52913881..52913889,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52913881..52913889,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52913881..52913889,+ | |||
|id=chr12:52913881..52913889,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.70e-25!43;CL:0002159!1.78e-23!13;CL:0000066!2.70e-21!254;CL:0002368!1.45e-18!13;CL:0000223!6.06e-17!59;CL:0000244!3.30e-16!4;CL:0000731!3.30e-16!4;CL:0002202!5.34e-16!9;CL:0002632!5.34e-16!9;CL:0002328!2.93e-13!3;CL:0000068!7.65e-13!3;CL:0000069!7.65e-13!3;CL:0000307!7.65e-13!3;CL:0000377!7.65e-13!3;CL:0000349!9.32e-13!3;CL:0002577!9.32e-13!3;CL:0002621!2.20e-12!3;CL:0002077!3.41e-12!33;CL:0002166!4.94e-12!3;CL:0000240!3.67e-11!6;CL:0000311!3.67e-11!6;CL:0000079!3.67e-11!6;CL:0000237!3.67e-11!6;CL:0000036!3.67e-11!6;CL:0000357!3.67e-11!6;CL:0000114!3.67e-11!6;CL:0002251!1.97e-10!21;CL:0000575!2.59e-09!2;CL:0000362!2.02e-08!8;CL:0000312!4.56e-08!5;CL:0000076!1.05e-07!62;CL:0000622!1.54e-07!5;CL:0000220!5.42e-07!246;CL:0002321!6.95e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.07e-32;14!CL:0002328;1.22e-29;3!CL:0002577;2.16e-28;3!CL:0002202;9.83e-27;9!CL:0002632;9.83e-27;9!CL:0000575;3.85e-20;2!CL:0002368;1.68e-18;13!CL:0000312;8.11e-18;5!CL:0000362;4.04e-17;9!CL:0000240;5.97e-15;6!CL:0000311;5.97e-15;6!CL:0000079;5.97e-15;6!CL:0000237;5.97e-15;6!CL:0000307;7.66e-14;3!CL:0002077;9.64e-13;34!CL:0000244;1.13e-10;4!CL:0000731;1.13e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,9.51e-33,14;CL:0002328,1.34e-29,3;CL:0002577,2.17e-28,3;CL:0002202,1.01e-26,9;CL:0002632,1.01e-26,9;CL:0000575,4.04e-20,2;CL:0002368,1.71e-18,13;CL:0000312,6.26e-18,5;CL:0000362,3.64e-17,9;CL:0000240,4.82e-15,6;CL:0000311,4.82e-15,6;CL:0000079,4.82e-15,6;CL:0000237,4.82e-15,6;CL:0000036,4.82e-15,6;CL:0000357,4.82e-15,6;CL:0000114,4.82e-15,6;CL:0000068,7.42e-14,3;CL:0000069,7.42e-14,3;CL:0000307,7.42e-14,3;CL:0000377,7.42e-14,3;CL:0002077,4.17e-13,34;CL:0000066,3.37e-12,253;CL:0000244,1.05e-10,4;CL:0000731,1.05e-10,4;CL:0002076,8.40e-08,42 | |||
|ontology_enrichment_development_v019=CL:0000357;5.97e-15;6!CL:0000114;5.97e-15;6!CL:0000377;7.66e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.21e-10;1!DOID:3149;1.21e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.97e-11,1;DOID:3149,9.97e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000365!2.86e-19!5;UBERON:0005910!5.13e-16!6;UBERON:0004815!2.93e-13!3;UBERON:0002031!2.93e-13!3;UBERON:0007196!3.08e-13!14;UBERON:0001558!3.08e-13!14;UBERON:0001949!2.20e-12!3;UBERON:0004119!5.17e-12!169;UBERON:0000925!5.17e-12!169;UBERON:0006595!5.17e-12!169;UBERON:0002185!4.80e-10!4;UBERON:0001004!5.75e-10!72;UBERON:0001987!1.13e-09!4;UBERON:0004340!1.13e-09!4;UBERON:0003126!3.51e-09!7;UBERON:0001005!3.51e-09!7;UBERON:0001708!3.88e-09!4;UBERON:0001704!3.88e-09!4;UBERON:0003102!7.16e-09!95;UBERON:0000161!1.03e-08!35;UBERON:0000166!7.06e-08!21;UBERON:0005178!7.30e-08!34;UBERON:0002224!7.30e-08!34;UBERON:0005181!1.36e-07!35;UBERON:0000165!2.18e-07!28;UBERON:0000930!2.18e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.22e-29;3!UBERON:0002031;1.22e-29;3!UBERON:0001987;1.79e-21;4!UBERON:0002185;4.69e-18;5!UBERON:0007196;5.03e-16;15!UBERON:0001558;5.03e-16;15!UBERON:0000485;4.58e-13;7!UBERON:0000964;1.50e-10;4!UBERON:0010409;1.50e-10;4!UBERON:0001003;2.31e-10;15!UBERON:0007376;2.31e-10;15!UBERON:0000365;1.03e-08;5!UBERON:0005911;2.34e-08;36!UBERON:0000486;9.75e-08;12!UBERON:0005910;2.12e-07;6!UBERON:0010371;2.94e-07;31!UBERON:0005178;3.19e-07;34!UBERON:0002224;3.19e-07;34!UBERON:0004807;3.49e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.34e-29,3;UBERON:0002031,1.34e-29,3;UBERON:0001987,1.80e-21,4;UBERON:0004340,1.80e-21,4;UBERON:0002185,4.98e-18,5;UBERON:0007196,5.11e-16,15;UBERON:0001558,5.11e-16,15;UBERON:0003124,1.54e-12,7;UBERON:0000964,1.54e-10,4;UBERON:0010409,1.54e-10,4;UBERON:0004348,1.54e-10,4;UBERON:0005427,1.54e-10,4;UBERON:0001003,2.17e-10,15;UBERON:0007376,2.17e-10,15;UBERON:0007383,2.17e-10,15;UBERON:0000485,2.87e-10,9;UBERON:0000365,9.73e-09,5;UBERON:0005910,2.02e-07,6;UBERON:0005178,5.52e-07,34;UBERON:0002224,5.52e-07,34;UBERON:0005157,6.09e-07,47;UBERON:0005181,8.85e-07,35 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.43594857135249,3.31326510656075,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,5.19098219898201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86575485194663,3.37205259772859,4.2222168412885,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62403003920662,0.16798212819886,0.141775097242386,0.53735113621709,0,3.06706143332169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81876542867756,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,2.68120910214315,4.3556393944529,0,0.43050537267123,3.36942951335251,4.43430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.387956065953678,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67717343799633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.85359238546975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:52913881..52913889,+ | |||
}} | }} |
Latest revision as of 09:38, 24 July 2015
Short description: | p@chr12:52913881..52913889, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52913881..52913889, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 9.51e-33 | 14 |
bronchial epithelial cell | 1.34e-29 | 3 |
placental epithelial cell | 2.17e-28 | 3 |
epithelial cell of tracheobronchial tree | 1.01e-26 | 9 |
epithelial cell of lower respiratory tract | 1.01e-26 | 9 |
corneal epithelial cell | 4.04e-20 | 2 |
respiratory epithelial cell | 1.71e-18 | 13 |
keratinocyte | 6.26e-18 | 5 |
epidermal cell | 3.64e-17 | 9 |
stratified squamous epithelial cell | 4.82e-15 | 6 |
keratin accumulating cell | 4.82e-15 | 6 |
stratified epithelial cell | 4.82e-15 | 6 |
keratinizing barrier epithelial cell | 4.82e-15 | 6 |
epithelial fate stem cell | 4.82e-15 | 6 |
stratified epithelial stem cell | 4.82e-15 | 6 |
surface ectodermal cell | 4.82e-15 | 6 |
duct epithelial cell | 7.42e-14 | 3 |
branched duct epithelial cell | 7.42e-14 | 3 |
tracheal epithelial cell | 7.42e-14 | 3 |
tracheoblast | 7.42e-14 | 3 |
ecto-epithelial cell | 4.17e-13 | 34 |
epithelial cell | 3.37e-12 | 253 |
transitional epithelial cell | 1.05e-10 | 4 |
urothelial cell | 1.05e-10 | 4 |
endo-epithelial cell | 8.40e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.34e-29 | 3 |
epithelium of bronchus | 1.34e-29 | 3 |
placenta | 1.80e-21 | 4 |
allantois | 1.80e-21 | 4 |
bronchus | 4.98e-18 | 5 |
tracheobronchial tree | 5.11e-16 | 15 |
lower respiratory tract | 5.11e-16 | 15 |
chorion | 1.54e-12 | 7 |
cornea | 1.54e-10 | 4 |
eye surface | 1.54e-10 | 4 |
optic eminence | 1.54e-10 | 4 |
corneal primordium | 1.54e-10 | 4 |
skin epidermis | 2.17e-10 | 15 |
outer epithelium | 2.17e-10 | 15 |
enveloping layer of ectoderm | 2.17e-10 | 15 |
simple columnar epithelium | 2.87e-10 | 9 |
urothelium | 9.73e-09 | 5 |
transitional epithelium | 2.02e-07 | 6 |
thoracic cavity element | 5.52e-07 | 34 |
thoracic cavity | 5.52e-07 | 34 |
epithelial fold | 6.09e-07 | 47 |
thoracic segment organ | 8.85e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.97e-11 | 1 |
keratoacanthoma | 9.97e-11 | 1 |