FFCP PHASE1:Hg19::chr15:80842696..80842711,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:80842696..80842711,- to FFCP PHASE1:Hg19::chr15:80842696..80842711,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:80842696..80842711,- | |||
|coexpression_cluster_id=C3522 | |||
|description=CAGE_peak_at_chr15:80842696..80842711,- | |||
|id=chr15:80842696..80842711,- | |||
|ontology_enrichment_celltype=CL:0000055!1.18e-41!180;CL:0000057!2.60e-37!75;CL:0002620!1.46e-19!23;CL:0000680!6.51e-19!57;CL:0000056!6.51e-19!57;CL:0000355!6.51e-19!57;CL:0000183!2.91e-18!59;CL:0000187!4.58e-18!54;CL:0000192!8.41e-18!42;CL:0000514!8.41e-18!42;CL:0000393!3.73e-15!60;CL:0000211!3.73e-15!60;CL:0000048!2.39e-14!430;CL:0000723!1.10e-13!436;CL:0000359!3.62e-13!32;CL:0000034!7.75e-13!444;CL:0000222!2.18e-11!119;CL:0002556!2.93e-08!6;CL:0000144!7.83e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.37e-20;23!CL:0000708;1.73e-13;3!CL:0000057;4.55e-13;73!CL:0002556;2.43e-11;6!CL:1000306;1.29e-10;4!CL:0002547;1.29e-10;4!CL:0002596;3.66e-09;2!CL:0000327;6.79e-07;15!CL:0000346;9.58e-07;3!CL:1000428;9.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.39e-26,76;CL:0002620,2.59e-20,23;CL:0000708,1.02e-13,3;CL:0002556,1.51e-11,6;CL:1000306,2.04e-10,4;CL:0002547,2.04e-10,4;CL:0002596,1.27e-09,2;CL:0000327,6.55e-07,15;CL:0000346,7.11e-07,3;CL:1000428,7.11e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.48e-07!5;DOID:450!1.48e-07!5;DOID:66!1.48e-07!5;DOID:423!1.48e-07!5;DOID:0080000!1.48e-07!5;DOID:11722!1.48e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.02e-13;5!DOID:450;1.02e-13;5!DOID:66;1.02e-13;5!DOID:423;1.02e-13;5!DOID:0080000;1.02e-13;5!DOID:11722;1.02e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.72e-13,5;DOID:450,1.72e-13,5;DOID:66,1.72e-13,5;DOID:423,1.72e-13,5;DOID:0080000,1.72e-13,5;DOID:11722,1.72e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.72e-22!83;UBERON:0002329!3.72e-22!83;UBERON:0003077!3.72e-22!83;UBERON:0003059!3.72e-22!83;UBERON:0007282!3.72e-22!83;UBERON:0009618!3.72e-22!83;UBERON:0007285!3.72e-22!83;UBERON:0004290!2.59e-20!70;UBERON:0001134!6.68e-17!61;UBERON:0002036!6.68e-17!61;UBERON:0003082!6.68e-17!61;UBERON:0000486!2.42e-16!82;UBERON:0002385!5.35e-16!63;UBERON:0001015!5.35e-16!63;UBERON:0000383!5.35e-16!63;UBERON:0005256!1.76e-14!143;UBERON:0000475!2.27e-13!365;UBERON:0002097!2.18e-12!40;UBERON:0002199!3.98e-11!45;UBERON:0002416!3.98e-11!45;UBERON:0003102!1.57e-10!95;UBERON:0001637!4.71e-10!42;UBERON:0003509!4.71e-10!42;UBERON:0004572!4.71e-10!42;UBERON:0004573!2.16e-09!33;UBERON:0004571!2.16e-09!33;UBERON:0002100!3.54e-09!216;UBERON:0001758!2.93e-08!6;UBERON:0003672!2.93e-08!6;UBERON:0000119!1.19e-07!312;UBERON:0004872!1.35e-07!84;UBERON:0002049!2.63e-07!79;UBERON:0007798!2.63e-07!79;UBERON:0001981!4.03e-07!60;UBERON:0007500!4.03e-07!60;UBERON:0004537!4.03e-07!60;UBERON:0006965!4.03e-07!60;UBERON:0000490!4.32e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.37e-13;41!UBERON:0003210;1.73e-13;3!UBERON:0001758;2.43e-11;6!UBERON:0003672;2.43e-11;6!UBERON:0004797;1.29e-10;4!UBERON:0000415;1.29e-10;4!UBERON:0007240;1.29e-10;4!UBERON:0005742;1.29e-10;4!UBERON:0005734;1.29e-10;4!UBERON:0004664;1.29e-10;4!UBERON:0004663;1.29e-10;4!UBERON:0002199;1.94e-10;46!UBERON:0002416;1.94e-10;46!UBERON:0003129;9.86e-10;7!UBERON:0003102;3.37e-09;50!UBERON:0005396;3.66e-09;2!UBERON:0000412;9.58e-07;3!UBERON:0001992;9.58e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.78e-17,41;UBERON:0002199,3.14e-15,46;UBERON:0002416,3.14e-15,46;UBERON:0003210,1.02e-13,3;UBERON:0003102,1.62e-12,99;UBERON:0001758,1.51e-11,6;UBERON:0003672,1.51e-11,6;UBERON:0000415,2.04e-10,4;UBERON:0007240,2.04e-10,4;UBERON:0005742,2.04e-10,4;UBERON:0005734,2.04e-10,4;UBERON:0004664,2.04e-10,4;UBERON:0004663,2.04e-10,4;UBERON:0003129,6.58e-10,7;UBERON:0005396,1.27e-09,2;UBERON:0000412,7.11e-07,3;UBERON:0001992,7.11e-07,3;UBERON:0002384,8.33e-07,371 | |||
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| ||
|short_description=p@chr15:80842696..80842711,- | |||
}} | }} |
Latest revision as of 04:47, 25 July 2015
Short description: | p@chr15:80842696..80842711, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:80842696..80842711, - |
Coexpression cluster: | C3522_Fibroblast_Smooth_basal_mesenchymal_Meningeal_Ewing_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.39e-26 | 76 |
skin fibroblast | 2.59e-20 | 23 |
leptomeningeal cell | 1.02e-13 | 3 |
fibroblast of periodontium | 1.51e-11 | 6 |
fibroblast of tunica adventitia of artery | 2.04e-10 | 4 |
fibroblast of the aortic adventitia | 2.04e-10 | 4 |
smooth muscle cell of the carotid artery | 1.27e-09 | 2 |
extracellular matrix secreting cell | 6.55e-07 | 15 |
hair follicle dermal papilla cell | 7.11e-07 | 3 |
stem cell of epidermis | 7.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.78e-17 | 41 |
integument | 3.14e-15 | 46 |
integumental system | 3.14e-15 | 46 |
blood-cerebrospinal fluid barrier | 1.02e-13 | 3 |
surface structure | 1.62e-12 | 99 |
periodontium | 1.51e-11 | 6 |
dentition | 1.51e-11 | 6 |
artery wall | 2.04e-10 | 4 |
tunica adventitia of artery | 2.04e-10 | 4 |
adventitia | 2.04e-10 | 4 |
tunica adventitia of blood vessel | 2.04e-10 | 4 |
aorta tunica adventitia | 2.04e-10 | 4 |
aorta wall | 2.04e-10 | 4 |
skull | 6.58e-10 | 7 |
carotid artery segment | 1.27e-09 | 2 |
dermal papilla | 7.11e-07 | 3 |
papillary layer of dermis | 7.11e-07 | 3 |
connective tissue | 8.33e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.72e-13 | 5 |
myotonic disease | 1.72e-13 | 5 |
muscle tissue disease | 1.72e-13 | 5 |
myopathy | 1.72e-13 | 5 |
muscular disease | 1.72e-13 | 5 |
myotonic dystrophy | 1.72e-13 | 5 |