FFCP PHASE1:Hg19::chr16:21652353..21652374,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:21652353..21652374,- | |||
|coexpression_cluster_id=C469 | |coexpression_cluster_id=C469 | ||
|description=CAGE_peak_at_chr16:21652353..21652374,- | |description=CAGE_peak_at_chr16:21652353..21652374,- | ||
|id=chr16:21652353..21652374,- | |id=chr16:21652353..21652374,- | ||
|ontology_enrichment_celltype=CL:0002009!1.31e-102!65;CL:0002194!3.60e-98!63;CL:0000576!3.60e-98!63;CL:0000040!3.60e-98!63;CL:0000559!3.60e-98!63;CL:0000557!8.22e-93!71;CL:0000766!5.77e-90!76;CL:0000839!4.75e-87!70;CL:0002057!9.49e-85!42;CL:0000860!2.56e-78!45;CL:0000763!3.10e-61!112;CL:0000049!3.10e-61!112;CL:0000738!7.63e-50!140;CL:0002087!1.19e-49!119;CL:0002031!3.78e-47!124;CL:0000037!9.81e-38!172;CL:0000566!9.81e-38!172;CL:0002032!8.62e-37!165;CL:0000837!8.62e-37!165;CL:0000988!8.01e-35!182;CL:0000134!2.07e-12!358;CL:0002393!6.04e-12!9;CL:0002397!6.04e-12!9;CL:0002320!6.96e-12!365;CL:0000840!8.77e-11!5;CL:0001029!8.77e-11!5;CL:0000219!4.87e-10!390;CL:0000235!1.71e-09!10;CL:0000775!7.95e-09!3;CL:0000048!7.25e-08!430;CL:0000723!1.46e-07!436;CL:0002619!1.60e-07!3;CL:0000034!3.60e-07!444;CL:0000990!4.86e-07!8 | |ontology_enrichment_celltype=CL:0002009!1.31e-102!65;CL:0002194!3.60e-98!63;CL:0000576!3.60e-98!63;CL:0000040!3.60e-98!63;CL:0000559!3.60e-98!63;CL:0000557!8.22e-93!71;CL:0000766!5.77e-90!76;CL:0000839!4.75e-87!70;CL:0002057!9.49e-85!42;CL:0000860!2.56e-78!45;CL:0000763!3.10e-61!112;CL:0000049!3.10e-61!112;CL:0000738!7.63e-50!140;CL:0002087!1.19e-49!119;CL:0002031!3.78e-47!124;CL:0000037!9.81e-38!172;CL:0000566!9.81e-38!172;CL:0002032!8.62e-37!165;CL:0000837!8.62e-37!165;CL:0000988!8.01e-35!182;CL:0000134!2.07e-12!358;CL:0002393!6.04e-12!9;CL:0002397!6.04e-12!9;CL:0002320!6.96e-12!365;CL:0000840!8.77e-11!5;CL:0001029!8.77e-11!5;CL:0000219!4.87e-10!390;CL:0000235!1.71e-09!10;CL:0000775!7.95e-09!3;CL:0000048!7.25e-08!430;CL:0000723!1.46e-07!436;CL:0002619!1.60e-07!3;CL:0000034!3.60e-07!444;CL:0000990!4.86e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.86e-81;39!CL:0000234;3.86e-81;39!CL:0000860;2.71e-73;33!CL:0002057;2.71e-73;33!CL:0000576;1.97e-35;48!CL:0000766;7.54e-31;69!CL:0000235;3.31e-25;6!CL:0000763;1.89e-17;100!CL:0002087;2.55e-10;104!CL:0000738;3.98e-10;136!CL:0000775;3.62e-09;3!CL:0000219;1.30e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.42e-91,48;CL:0000234,4.42e-91,48;CL:0002194,2.99e-83,59;CL:0000576,2.99e-83,59;CL:0000040,2.99e-83,59;CL:0000559,2.99e-83,59;CL:0002009,2.16e-80,61;CL:0000766,1.19e-77,72;CL:0000839,5.44e-74,66;CL:0000557,8.00e-73,67;CL:0000860,4.05e-69,42;CL:0002057,4.05e-69,42;CL:0000763,3.53e-50,108;CL:0000049,3.53e-50,108;CL:0002087,1.99e-40,115;CL:0000738,8.93e-39,136;CL:0002031,1.58e-38,120;CL:0002032,6.46e-32,161;CL:0000837,6.46e-32,161;CL:0000037,2.34e-30,168;CL:0000988,1.56e-28,177;CL:0000235,2.34e-25,6;CL:0000134,2.23e-11,354;CL:0002320,4.85e-11,361;CL:0000219,7.44e-10,386;CL:0000775,3.08e-09,3;CL:0000048,2.12e-08,427;CL:0000723,3.36e-08,433;CL:0000034,6.12e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.85e-52;42!CL:0000049;5.57e-19;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.75e-81!80;UBERON:0002390!3.67e-79!102;UBERON:0003061!3.67e-79!102;UBERON:0001474!3.12e-74!86;UBERON:0002193!9.72e-71!112;UBERON:0004765!4.00e-61!101;UBERON:0001434!4.00e-61!101;UBERON:0002405!2.38e-56!115;UBERON:0003081!3.97e-33!216;UBERON:0002204!2.50e-31!167;UBERON:0002384!3.62e-11!375;UBERON:0000926!1.40e-09!448;UBERON:0004120!1.40e-09!448;UBERON:0006603!1.40e-09!448;UBERON:0000062!3.90e-07!511;UBERON:0000923!9.11e-07!604;UBERON:0005291!9.11e-07!604;UBERON:0006598!9.11e-07!604;UBERON:0002532!9.11e-07!604;UBERON:0002050!9.98e-07!605;UBERON:0005423!9.98e-07!605 | |ontology_enrichment_uberon=UBERON:0002371!7.75e-81!80;UBERON:0002390!3.67e-79!102;UBERON:0003061!3.67e-79!102;UBERON:0001474!3.12e-74!86;UBERON:0002193!9.72e-71!112;UBERON:0004765!4.00e-61!101;UBERON:0001434!4.00e-61!101;UBERON:0002405!2.38e-56!115;UBERON:0003081!3.97e-33!216;UBERON:0002204!2.50e-31!167;UBERON:0002384!3.62e-11!375;UBERON:0000926!1.40e-09!448;UBERON:0004120!1.40e-09!448;UBERON:0006603!1.40e-09!448;UBERON:0000062!3.90e-07!511;UBERON:0000923!9.11e-07!604;UBERON:0005291!9.11e-07!604;UBERON:0006598!9.11e-07!604;UBERON:0002532!9.11e-07!604;UBERON:0002050!9.98e-07!605;UBERON:0005423!9.98e-07!605 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-63,76;UBERON:0001474,1.11e-58,82;UBERON:0002390,1.78e-55,98;UBERON:0003061,1.78e-55,98;UBERON:0004765,4.81e-53,90;UBERON:0002405,3.55e-51,93;UBERON:0002193,7.08e-50,108;UBERON:0001434,3.00e-47,100;UBERON:0002204,3.47e-26,167;UBERON:0003081,5.29e-24,203;UBERON:0000926,2.04e-13,315;UBERON:0004120,2.04e-13,315;UBERON:0006603,2.04e-13,315;UBERON:0002384,1.40e-10,371 | |||
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| ||
|short_description=p@chr16:21652353..21652374,- | |short_description=p@chr16:21652353..21652374,- | ||
}} | }} |
Latest revision as of 07:06, 25 July 2015
Short description: | p@chr16:21652353..21652374, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:21652353..21652374, - |
Coexpression cluster: | C469_Neutrophils_Monocytederived_CD14_CD19_Eosinophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.42e-91 | 48 |
phagocyte | 4.42e-91 | 48 |
monopoietic cell | 2.99e-83 | 59 |
monocyte | 2.99e-83 | 59 |
monoblast | 2.99e-83 | 59 |
promonocyte | 2.99e-83 | 59 |
macrophage dendritic cell progenitor | 2.16e-80 | 61 |
myeloid leukocyte | 1.19e-77 | 72 |
myeloid lineage restricted progenitor cell | 5.44e-74 | 66 |
granulocyte monocyte progenitor cell | 8.00e-73 | 67 |
classical monocyte | 4.05e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.05e-69 | 42 |
myeloid cell | 3.53e-50 | 108 |
common myeloid progenitor | 3.53e-50 | 108 |
nongranular leukocyte | 1.99e-40 | 115 |
leukocyte | 8.93e-39 | 136 |
hematopoietic lineage restricted progenitor cell | 1.58e-38 | 120 |
hematopoietic oligopotent progenitor cell | 6.46e-32 | 161 |
hematopoietic multipotent progenitor cell | 6.46e-32 | 161 |
hematopoietic stem cell | 2.34e-30 | 168 |
hematopoietic cell | 1.56e-28 | 177 |
macrophage | 2.34e-25 | 6 |
mesenchymal cell | 2.23e-11 | 354 |
connective tissue cell | 4.85e-11 | 361 |
motile cell | 7.44e-10 | 386 |
neutrophil | 3.08e-09 | 3 |
multi fate stem cell | 2.12e-08 | 427 |
somatic stem cell | 3.36e-08 | 433 |
stem cell | 6.12e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-63 | 76 |
bone element | 1.11e-58 | 82 |
hematopoietic system | 1.78e-55 | 98 |
blood island | 1.78e-55 | 98 |
skeletal element | 4.81e-53 | 90 |
immune system | 3.55e-51 | 93 |
hemolymphoid system | 7.08e-50 | 108 |
skeletal system | 3.00e-47 | 100 |
musculoskeletal system | 3.47e-26 | 167 |
lateral plate mesoderm | 5.29e-24 | 203 |
mesoderm | 2.04e-13 | 315 |
mesoderm-derived structure | 2.04e-13 | 315 |
presumptive mesoderm | 2.04e-13 | 315 |
connective tissue | 1.40e-10 | 371 |