FFCP PHASE1:Hg19::chr16:82104491..82104507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:82104491..82104507,+ | |||
|description=CAGE_peak_at_chr16:82104491..82104507,+ | |description=CAGE_peak_at_chr16:82104491..82104507,+ | ||
|id=chr16:82104491..82104507,+ | |id=chr16:82104491..82104507,+ | ||
|ontology_enrichment_celltype=CL:0002076!5.62e-29!43;CL:0002368!1.32e-26!13;CL:0000223!1.06e-19!59;CL:0002159!5.17e-17!13;CL:0000066!4.27e-16!254;CL:0002202!5.83e-14!9;CL:0002632!5.83e-14!9;CL:0002621!1.37e-12!3;CL:0002166!2.89e-12!3;CL:0002328!1.49e-11!3;CL:0000068!1.84e-11!3;CL:0000069!1.84e-11!3;CL:0000307!1.84e-11!3;CL:0000377!1.84e-11!3;CL:0002251!8.17e-10!21;CL:0000317!1.39e-08!2;CL:1000448!1.39e-08!2;CL:0002308!1.39e-08!2;CL:0002140!1.39e-08!2;CL:0002077!2.04e-07!33;CL:0000362!2.42e-07!8;CL:0000622!4.73e-07!5 | |ontology_enrichment_celltype=CL:0002076!5.62e-29!43;CL:0002368!1.32e-26!13;CL:0000223!1.06e-19!59;CL:0002159!5.17e-17!13;CL:0000066!4.27e-16!254;CL:0002202!5.83e-14!9;CL:0002632!5.83e-14!9;CL:0002621!1.37e-12!3;CL:0002166!2.89e-12!3;CL:0002328!1.49e-11!3;CL:0000068!1.84e-11!3;CL:0000069!1.84e-11!3;CL:0000307!1.84e-11!3;CL:0000377!1.84e-11!3;CL:0002251!8.17e-10!21;CL:0000317!1.39e-08!2;CL:1000448!1.39e-08!2;CL:0002308!1.39e-08!2;CL:0002140!1.39e-08!2;CL:0002077!2.04e-07!33;CL:0000362!2.42e-07!8;CL:0000622!4.73e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002621;3.66e-33;3!CL:0002166;3.48e-32;3!CL:0002368;2.04e-28;13!CL:0002159;1.56e-26;14!CL:0000317;8.24e-22;2!CL:1000448;8.24e-22;2!CL:0002308;8.24e-22;2!CL:0002140;8.24e-22;2!CL:0002076;8.68e-21;42!CL:0002077;1.99e-09;34!CL:0000622;2.68e-09;5!CL:0000154;6.83e-08;6 | |ontology_enrichment_celltype_v019=CL:0002621;3.66e-33;3!CL:0002166;3.48e-32;3!CL:0002368;2.04e-28;13!CL:0002159;1.56e-26;14!CL:0000317;8.24e-22;2!CL:1000448;8.24e-22;2!CL:0002308;8.24e-22;2!CL:0002140;8.24e-22;2!CL:0002076;8.68e-21;42!CL:0002077;1.99e-09;34!CL:0000622;2.68e-09;5!CL:0000154;6.83e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.49e-33,3;CL:0002166,2.98e-32,3;CL:0002368,1.54e-28,13;CL:0002159,2.09e-26,14;CL:0002076,1.09e-23,42;CL:0000317,1.14e-21,2;CL:1000448,1.14e-21,2;CL:0002308,1.14e-21,2;CL:0002140,1.14e-21,2;CL:0000223,8.65e-17,58;CL:0000066,5.10e-11,253;CL:0002077,1.12e-10,34;CL:0000622,3.04e-09,5;CL:0002321,2.43e-08,250;CL:0000154,7.58e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000223;1.92e-08;58 | |ontology_enrichment_development_v019=CL:0000223;1.92e-08;58 | ||
|ontology_enrichment_disease=DOID:1749!1.37e-08!14 | |ontology_enrichment_disease=DOID:1749!1.37e-08!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!9.09e-19!72;UBERON:0001949!1.37e-12!3;UBERON:0004119!1.94e-12!169;UBERON:0000925!1.94e-12!169;UBERON:0006595!1.94e-12!169;UBERON:0007196!7.10e-12!14;UBERON:0001558!7.10e-12!14;UBERON:0000065!9.42e-12!53;UBERON:0004815!1.49e-11!3;UBERON:0002031!1.49e-11!3;UBERON:0005178!1.65e-10!34;UBERON:0002224!1.65e-10!34;UBERON:0005181!3.84e-10!35;UBERON:0000161!4.04e-10!35;UBERON:0000166!8.27e-10!21;UBERON:0001007!9.07e-10!155;UBERON:0001555!9.07e-10!155;UBERON:0007026!9.07e-10!155;UBERON:0001708!2.71e-09!4;UBERON:0001704!2.71e-09!4;UBERON:0000165!8.14e-09!28;UBERON:0000930!8.14e-09!28;UBERON:0002185!9.10e-09!4;UBERON:0002419!1.39e-08!2;UBERON:0007771!1.39e-08!2;UBERON:0003297!1.39e-08!2;UBERON:0001821!1.39e-08!2;UBERON:0003487!1.39e-08!2;UBERON:0001820!1.39e-08!2;UBERON:0005089!1.39e-08!2;UBERON:0005088!1.39e-08!2;UBERON:0003126!1.40e-08!7;UBERON:0001005!1.40e-08!7;UBERON:0001444!3.60e-08!48;UBERON:0003102!8.02e-08!95;UBERON:0004807!4.31e-07!28;UBERON:0004921!8.90e-07!129;UBERON:0004185!8.90e-07!129;UBERON:0000077!9.45e-07!130 | |ontology_enrichment_uberon=UBERON:0001004!9.09e-19!72;UBERON:0001949!1.37e-12!3;UBERON:0004119!1.94e-12!169;UBERON:0000925!1.94e-12!169;UBERON:0006595!1.94e-12!169;UBERON:0007196!7.10e-12!14;UBERON:0001558!7.10e-12!14;UBERON:0000065!9.42e-12!53;UBERON:0004815!1.49e-11!3;UBERON:0002031!1.49e-11!3;UBERON:0005178!1.65e-10!34;UBERON:0002224!1.65e-10!34;UBERON:0005181!3.84e-10!35;UBERON:0000161!4.04e-10!35;UBERON:0000166!8.27e-10!21;UBERON:0001007!9.07e-10!155;UBERON:0001555!9.07e-10!155;UBERON:0007026!9.07e-10!155;UBERON:0001708!2.71e-09!4;UBERON:0001704!2.71e-09!4;UBERON:0000165!8.14e-09!28;UBERON:0000930!8.14e-09!28;UBERON:0002185!9.10e-09!4;UBERON:0002419!1.39e-08!2;UBERON:0007771!1.39e-08!2;UBERON:0003297!1.39e-08!2;UBERON:0001821!1.39e-08!2;UBERON:0003487!1.39e-08!2;UBERON:0001820!1.39e-08!2;UBERON:0005089!1.39e-08!2;UBERON:0005088!1.39e-08!2;UBERON:0003126!1.40e-08!7;UBERON:0001005!1.40e-08!7;UBERON:0001444!3.60e-08!48;UBERON:0003102!8.02e-08!95;UBERON:0004807!4.31e-07!28;UBERON:0004921!8.90e-07!129;UBERON:0004185!8.90e-07!129;UBERON:0000077!9.45e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.66e-33;3!UBERON:0001708;2.53e-24;4!UBERON:0008895;2.53e-24;4!UBERON:0002419;8.24e-22;2!UBERON:0007771;8.24e-22;2!UBERON:0003297;8.24e-22;2!UBERON:0001821;8.24e-22;2!UBERON:0003487;8.24e-22;2!UBERON:0001820;8.24e-22;2!UBERON:0011159;1.35e-19;5!UBERON:0003929;1.37e-14;7!UBERON:0003350;7.74e-13;8!UBERON:0001828;7.74e-13;8!UBERON:0011137;3.19e-09;11!UBERON:0010323;3.19e-09;11!UBERON:0000486;9.87e-09;12!UBERON:0010371;1.56e-08;31!UBERON:0003729;4.26e-08;13!UBERON:0004807;4.74e-08;22!UBERON:0000065;1.80e-07;44!UBERON:0003126;6.98e-07;7!UBERON:0001005;6.98e-07;7!UBERON:0007196;8.12e-07;15!UBERON:0001558;8.12e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0001949;3.66e-33;3!UBERON:0001708;2.53e-24;4!UBERON:0008895;2.53e-24;4!UBERON:0002419;8.24e-22;2!UBERON:0007771;8.24e-22;2!UBERON:0003297;8.24e-22;2!UBERON:0001821;8.24e-22;2!UBERON:0003487;8.24e-22;2!UBERON:0001820;8.24e-22;2!UBERON:0011159;1.35e-19;5!UBERON:0003929;1.37e-14;7!UBERON:0003350;7.74e-13;8!UBERON:0001828;7.74e-13;8!UBERON:0011137;3.19e-09;11!UBERON:0010323;3.19e-09;11!UBERON:0000486;9.87e-09;12!UBERON:0010371;1.56e-08;31!UBERON:0003729;4.26e-08;13!UBERON:0004807;4.74e-08;22!UBERON:0000065;1.80e-07;44!UBERON:0003126;6.98e-07;7!UBERON:0001005;6.98e-07;7!UBERON:0007196;8.12e-07;15!UBERON:0001558;8.12e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.49e-33,3;UBERON:0001708,2.26e-24,4;UBERON:0008895,2.26e-24,4;UBERON:0002419,1.14e-21,2;UBERON:0007771,1.14e-21,2;UBERON:0003297,1.14e-21,2;UBERON:0001821,1.14e-21,2;UBERON:0003487,1.14e-21,2;UBERON:0001820,1.14e-21,2;UBERON:0005089,1.14e-21,2;UBERON:0005088,1.14e-21,2;UBERON:0011159,1.23e-19,5;UBERON:0010188,1.80e-16,6;UBERON:0002539,1.80e-16,6;UBERON:0008816,1.80e-16,6;UBERON:0001004,6.17e-13,74;UBERON:0003350,7.60e-13,8;UBERON:0001828,7.60e-13,8;UBERON:0003102,3.02e-09,99;UBERON:0010323,3.07e-09,11;UBERON:0000065,7.37e-09,54;UBERON:0000033,1.20e-08,56;UBERON:0003729,4.21e-08,13;UBERON:0000153,9.67e-08,62;UBERON:0007811,9.67e-08,62;UBERON:0011137,2.30e-07,14;UBERON:0003126,7.19e-07,7;UBERON:0001005,7.19e-07,7;UBERON:0007196,7.65e-07,15;UBERON:0001558,7.65e-07,15 | |||
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|short_description=p@chr16:82104491..82104507,+ | |short_description=p@chr16:82104491..82104507,+ | ||
}} | }} |
Latest revision as of 12:46, 25 July 2015
Short description: | p@chr16:82104491..82104507, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:82104491..82104507, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.49e-33 | 3 |
epithelial cell of Malassez | 2.98e-32 | 3 |
respiratory epithelial cell | 1.54e-28 | 13 |
general ecto-epithelial cell | 2.09e-26 | 14 |
endo-epithelial cell | 1.09e-23 | 42 |
sebum secreting cell | 1.14e-21 | 2 |
epithelial cell of sweat gland | 1.14e-21 | 2 |
epithelial cell of skin gland | 1.14e-21 | 2 |
acinar cell of sebaceous gland | 1.14e-21 | 2 |
endodermal cell | 8.65e-17 | 58 |
epithelial cell | 5.10e-11 | 253 |
ecto-epithelial cell | 1.12e-10 | 34 |
acinar cell | 3.04e-09 | 5 |
embryonic cell | 2.43e-08 | 250 |
protein secreting cell | 7.58e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.49e-33 | 3 |
jaw skeleton | 2.26e-24 | 4 |
splanchnocranium | 2.26e-24 | 4 |
skin gland | 1.14e-21 | 2 |
epidermis gland | 1.14e-21 | 2 |
gland of integumental system | 1.14e-21 | 2 |
sebaceous gland | 1.14e-21 | 2 |
skin sebaceous gland | 1.14e-21 | 2 |
sweat gland | 1.14e-21 | 2 |
sweat gland placode | 1.14e-21 | 2 |
sebaceous gland placode | 1.14e-21 | 2 |
primary subdivision of cranial skeletal system | 1.23e-19 | 5 |
protuberance | 1.80e-16 | 6 |
pharyngeal arch | 1.80e-16 | 6 |
embryonic head | 1.80e-16 | 6 |
respiratory system | 6.17e-13 | 74 |
epithelium of mucosa | 7.60e-13 | 8 |
gingiva | 7.60e-13 | 8 |
surface structure | 3.02e-09 | 99 |
cranial skeletal system | 3.07e-09 | 11 |
respiratory tract | 7.37e-09 | 54 |
head | 1.20e-08 | 56 |
mouth mucosa | 4.21e-08 | 13 |
anterior region of body | 9.67e-08 | 62 |
craniocervical region | 9.67e-08 | 62 |
axial skeletal system | 2.30e-07 | 14 |
trachea | 7.19e-07 | 7 |
respiratory airway | 7.19e-07 | 7 |
tracheobronchial tree | 7.65e-07 | 15 |
lower respiratory tract | 7.65e-07 | 15 |