FFCP PHASE1:Hg19::chr17:39767356..39767365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39767356..39767365,+ | |||
|description=CAGE_peak_at_chr17:39767356..39767365,+ | |description=CAGE_peak_at_chr17:39767356..39767365,+ | ||
|id=chr17:39767356..39767365,+ | |id=chr17:39767356..39767365,+ | ||
|ontology_enrichment_celltype=CL:0002252;2.70e-40;1!CL:0000575;3.81e-21;2!CL:0002328;1.96e-14;3!CL:0000244;2.80e-11;4!CL:0000731;2.80e-11;4 | |ontology_enrichment_celltype=CL:0002328!4.98e-19!3;CL:0002076!1.26e-14!43;CL:0002368!1.96e-11!13;CL:0002202!5.75e-11!9;CL:0002632!5.75e-11!9;CL:0000223!4.15e-10!59;CL:0000349!4.60e-09!3;CL:0002577!4.60e-09!3;CL:0002623!1.34e-08!3;CL:0000066!1.45e-08!254;CL:0002077!6.52e-08!33;CL:0002159!1.42e-07!13;CL:0002327!4.09e-07!4;CL:0002566!7.40e-07!1;CL:0002251!9.01e-07!21 | ||
| | |ontology_enrichment_celltype_v019=CL:0002252;2.70e-40;1!CL:0000575;3.81e-21;2!CL:0002328;1.96e-14;3!CL:0000244;2.80e-11;4!CL:0000731;2.80e-11;4 | ||
|ontology_enrichment_disease=DOID:3151;9.91e-41;1!DOID:3149;9.91e-41;1!DOID:3451;3.81e-21;2!DOID:4159;3.81e-21;2!DOID:0060122;3.81e-21;2 | |ontology_enrichment_celltype_v019_2=CL:0002252,3.30e-40,1;CL:0000575,3.11e-21,2;CL:0002328,1.83e-14,3;CL:0000244,2.80e-11,4;CL:0000731,2.80e-11,4 | ||
|ontology_enrichment_uberon=UBERON:0001043;1.96e-14;3!UBERON:0004815;1.96e-14;3!UBERON:0002031;1.96e-14;3!UBERON:0000014;2.80e-11;4!UBERON:0000964;2.80e-11;4!UBERON:0010409;2.80e-11;4!UBERON:0000365;2.74e-09;5!UBERON:0002185;3.35e-09;5!UBERON:0005910;5.92e-08;6!UBERON:0000485;6.21e-07;7 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3151!1.12e-07!1;DOID:3149!1.12e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;9.91e-41;1!DOID:3149;9.91e-41;1!DOID:3451;3.81e-21;2!DOID:4159;3.81e-21;2!DOID:0060122;3.81e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.48e-40,1;DOID:3149,1.48e-40,1;DOID:3451,4.66e-21,2;DOID:4159,4.66e-21,2;DOID:0060122,4.66e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0004815!4.98e-19!3;UBERON:0002031!4.98e-19!3;UBERON:0002185!2.07e-14!4;UBERON:0007196!1.78e-10!14;UBERON:0001558!1.78e-10!14;UBERON:0000166!1.99e-09!21;UBERON:0001004!2.15e-09!72;UBERON:0001723!5.62e-09!3;UBERON:0001033!5.62e-09!3;UBERON:0010056!5.62e-09!3;UBERON:0004119!1.42e-08!169;UBERON:0000925!1.42e-08!169;UBERON:0006595!1.42e-08!169;UBERON:0000077!2.60e-08!130;UBERON:0000078!6.79e-08!18;UBERON:0005178!9.17e-08!34;UBERON:0002224!9.17e-08!34;UBERON:0001041!1.44e-07!98;UBERON:0000065!1.44e-07!53;UBERON:0005181!1.62e-07!35;UBERON:0000161!2.53e-07!35;UBERON:0001911!4.09e-07!4;UBERON:0005333!4.09e-07!4;UBERON:0008425!4.09e-07!4;UBERON:0005311!4.09e-07!4;UBERON:0000072!4.61e-07!46;UBERON:0001987!5.36e-07!4;UBERON:0004340!5.36e-07!4;UBERON:0003112!5.50e-07!1;UBERON:0000032!5.50e-07!1;UBERON:0005253!5.50e-07!1;UBERON:0003128!5.50e-07!1;UBERON:0002241!5.50e-07!1;UBERON:0001703!5.50e-07!1;UBERON:0004761!5.50e-07!1;UBERON:0009617!5.50e-07!1;UBERON:0001043!5.52e-07!4;UBERON:0009143!5.52e-07!4;UBERON:0000165!6.20e-07!28;UBERON:0000930!6.20e-07!28;UBERON:0002372!6.97e-07!1;UBERON:0001961!6.97e-07!1;UBERON:0001744!6.97e-07!1;UBERON:0001735!6.97e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001043;1.96e-14;3!UBERON:0004815;1.96e-14;3!UBERON:0002031;1.96e-14;3!UBERON:0000014;2.80e-11;4!UBERON:0000964;2.80e-11;4!UBERON:0010409;2.80e-11;4!UBERON:0000365;2.74e-09;5!UBERON:0002185;3.35e-09;5!UBERON:0005910;5.92e-08;6!UBERON:0000485;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.83e-14,3;UBERON:0002031,1.83e-14,3;UBERON:0001043,2.09e-14,3;UBERON:0009143,2.09e-14,3;UBERON:0000964,2.53e-11,4;UBERON:0010409,2.53e-11,4;UBERON:0004348,2.53e-11,4;UBERON:0005427,2.53e-11,4;UBERON:0000014,3.10e-11,4;UBERON:0000365,2.74e-09,5;UBERON:0002185,3.22e-09,5;UBERON:0005910,5.92e-08,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.626909658919938,0,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,2.66058092122005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0126081255956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.626909658919938,0,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,2.66058092122005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0126081255956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr17:39767356..39767365,+ | |short_description=p@chr17:39767356..39767365,+ | ||
}} | }} |
Latest revision as of 16:45, 25 July 2015
Short description: | p@chr17:39767356..39767365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39767356..39767365, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 3.30e-40 | 1 |
corneal epithelial cell | 3.11e-21 | 2 |
bronchial epithelial cell | 1.83e-14 | 3 |
transitional epithelial cell | 2.80e-11 | 4 |
urothelial cell | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.83e-14 | 3 |
epithelium of bronchus | 1.83e-14 | 3 |
esophagus | 2.09e-14 | 3 |
esophageal region | 2.09e-14 | 3 |
cornea | 2.53e-11 | 4 |
eye surface | 2.53e-11 | 4 |
optic eminence | 2.53e-11 | 4 |
corneal primordium | 2.53e-11 | 4 |
zone of skin | 3.10e-11 | 4 |
urothelium | 2.74e-09 | 5 |
bronchus | 3.22e-09 | 5 |
transitional epithelium | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.48e-40 | 1 |
keratoacanthoma | 1.48e-40 | 1 |
skin carcinoma | 4.66e-21 | 2 |
skin cancer | 4.66e-21 | 2 |
integumentary system cancer | 4.66e-21 | 2 |