FFCP PHASE1:Hg19::chr17:39767356..39767365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39767356..39767365,+ | |||
|description=CAGE_peak_at_chr17:39767356..39767365,+ | |description=CAGE_peak_at_chr17:39767356..39767365,+ | ||
|id=chr17:39767356..39767365,+ | |id=chr17:39767356..39767365,+ | ||
|ontology_enrichment_celltype=CL:0002328!4.98e-19!3;CL:0002076!1.26e-14!43;CL:0002368!1.96e-11!13;CL:0002202!5.75e-11!9;CL:0002632!5.75e-11!9;CL:0000223!4.15e-10!59;CL:0000349!4.60e-09!3;CL:0002577!4.60e-09!3;CL:0002623!1.34e-08!3;CL:0000066!1.45e-08!254;CL:0002077!6.52e-08!33;CL:0002159!1.42e-07!13;CL:0002327!4.09e-07!4;CL:0002566!7.40e-07!1;CL:0002251!9.01e-07!21 | |ontology_enrichment_celltype=CL:0002328!4.98e-19!3;CL:0002076!1.26e-14!43;CL:0002368!1.96e-11!13;CL:0002202!5.75e-11!9;CL:0002632!5.75e-11!9;CL:0000223!4.15e-10!59;CL:0000349!4.60e-09!3;CL:0002577!4.60e-09!3;CL:0002623!1.34e-08!3;CL:0000066!1.45e-08!254;CL:0002077!6.52e-08!33;CL:0002159!1.42e-07!13;CL:0002327!4.09e-07!4;CL:0002566!7.40e-07!1;CL:0002251!9.01e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002252;2.70e-40;1!CL:0000575;3.81e-21;2!CL:0002328;1.96e-14;3!CL:0000244;2.80e-11;4!CL:0000731;2.80e-11;4 | |ontology_enrichment_celltype_v019=CL:0002252;2.70e-40;1!CL:0000575;3.81e-21;2!CL:0002328;1.96e-14;3!CL:0000244;2.80e-11;4!CL:0000731;2.80e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002252,3.30e-40,1;CL:0000575,3.11e-21,2;CL:0002328,1.83e-14,3;CL:0000244,2.80e-11,4;CL:0000731,2.80e-11,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3151!1.12e-07!1;DOID:3149!1.12e-07!1 | |ontology_enrichment_disease=DOID:3151!1.12e-07!1;DOID:3149!1.12e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;9.91e-41;1!DOID:3149;9.91e-41;1!DOID:3451;3.81e-21;2!DOID:4159;3.81e-21;2!DOID:0060122;3.81e-21;2 | |ontology_enrichment_disease_v019=DOID:3151;9.91e-41;1!DOID:3149;9.91e-41;1!DOID:3451;3.81e-21;2!DOID:4159;3.81e-21;2!DOID:0060122;3.81e-21;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.48e-40,1;DOID:3149,1.48e-40,1;DOID:3451,4.66e-21,2;DOID:4159,4.66e-21,2;DOID:0060122,4.66e-21,2 | |||
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|short_description=p@chr17:39767356..39767365,+ | |short_description=p@chr17:39767356..39767365,+ | ||
}} | }} |
Latest revision as of 16:45, 25 July 2015
Short description: | p@chr17:39767356..39767365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39767356..39767365, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 3.30e-40 | 1 |
corneal epithelial cell | 3.11e-21 | 2 |
bronchial epithelial cell | 1.83e-14 | 3 |
transitional epithelial cell | 2.80e-11 | 4 |
urothelial cell | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.83e-14 | 3 |
epithelium of bronchus | 1.83e-14 | 3 |
esophagus | 2.09e-14 | 3 |
esophageal region | 2.09e-14 | 3 |
cornea | 2.53e-11 | 4 |
eye surface | 2.53e-11 | 4 |
optic eminence | 2.53e-11 | 4 |
corneal primordium | 2.53e-11 | 4 |
zone of skin | 3.10e-11 | 4 |
urothelium | 2.74e-09 | 5 |
bronchus | 3.22e-09 | 5 |
transitional epithelium | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.48e-40 | 1 |
keratoacanthoma | 1.48e-40 | 1 |
skin carcinoma | 4.66e-21 | 2 |
skin cancer | 4.66e-21 | 2 |
integumentary system cancer | 4.66e-21 | 2 |