FFCP PHASE1:Hg19::chr17:39912021..39912046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39912021..39912046,- | |||
|description=CAGE_peak_at_chr17:39912021..39912046,- | |description=CAGE_peak_at_chr17:39912021..39912046,- | ||
|id=chr17:39912021..39912046,- | |id=chr17:39912021..39912046,- | ||
|ontology_enrichment_celltype=CL:0000066!1.77e-24!254;CL:0002076!1.42e-09!43;CL:0000223!1.36e-08!59 | |ontology_enrichment_celltype=CL:0000066!1.77e-24!254;CL:0002076!1.42e-09!43;CL:0000223!1.36e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002231;4.13e-12;3!CL:0002159;9.72e-10;14!CL:0000244;1.23e-09;4!CL:0000731;1.23e-09;4!CL:1000746;1.82e-09;7!CL:1000612;1.82e-09;7!CL:0000575;4.00e-09;2!CL:0002536;2.13e-08;2!CL:0002188;4.43e-08;5!CL:0000622;5.41e-08;5 | |ontology_enrichment_celltype_v019=CL:0002231;4.13e-12;3!CL:0002159;9.72e-10;14!CL:0000244;1.23e-09;4!CL:0000731;1.23e-09;4!CL:1000746;1.82e-09;7!CL:1000612;1.82e-09;7!CL:0000575;4.00e-09;2!CL:0002536;2.13e-08;2!CL:0002188;4.43e-08;5!CL:0000622;5.41e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.81e-12,3;CL:0000066,2.55e-12,253;CL:0000244,8.94e-10,4;CL:0000731,8.94e-10,4;CL:0002159,1.18e-09,14;CL:1000746,2.43e-09,7;CL:1000612,2.43e-09,7;CL:0000575,3.57e-09,2;CL:0002188,4.15e-08,5;CL:0002536,5.07e-08,2;CL:0000622,5.76e-08,5;CL:0000223,4.62e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000074;1.82e-09;7!UBERON:0001229;1.82e-09;7!UBERON:0005631;4.30e-09;10!UBERON:0000158;4.30e-09;10!UBERON:0000305;1.14e-08;7!UBERON:0000365;8.70e-08;5!UBERON:0006554;3.22e-07;30!UBERON:0001008;3.22e-07;30 | |ontology_enrichment_uberon_v019=UBERON:0000074;1.82e-09;7!UBERON:0001229;1.82e-09;7!UBERON:0005631;4.30e-09;10!UBERON:0000158;4.30e-09;10!UBERON:0000305;1.14e-08;7!UBERON:0000365;8.70e-08;5!UBERON:0006554;3.22e-07;30!UBERON:0001008;3.22e-07;30 | ||
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|short_description=p@chr17:39912021..39912046,- | |short_description=p@chr17:39912021..39912046,- | ||
}} | }} |
Latest revision as of 16:49, 25 July 2015
Short description: | p@chr17:39912021..39912046, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39912021..39912046, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.81e-12 | 3 |
epithelial cell | 2.55e-12 | 253 |
transitional epithelial cell | 8.94e-10 | 4 |
urothelial cell | 8.94e-10 | 4 |
general ecto-epithelial cell | 1.18e-09 | 14 |
glomerular cell | 2.43e-09 | 7 |
kidney corpuscule cell | 2.43e-09 | 7 |
corneal epithelial cell | 3.57e-09 | 2 |
glomerular endothelial cell | 4.15e-08 | 5 |
amniotic epithelial cell | 5.07e-08 | 2 |
acinar cell | 5.76e-08 | 5 |
endodermal cell | 4.62e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 1.57e-09 | 47 |
primitive nephron | 2.43e-09 | 7 |
renal glomerulus | 2.43e-09 | 7 |
renal corpuscle | 2.43e-09 | 7 |
glomerular capsule | 2.43e-09 | 7 |
metanephric mesenchyme | 2.43e-09 | 7 |
glomerular tuft | 2.43e-09 | 7 |
S-shaped body | 2.43e-09 | 7 |
renal vesicle | 2.43e-09 | 7 |
comma-shaped body | 2.43e-09 | 7 |
renal system | 2.80e-09 | 48 |
extraembryonic membrane | 4.05e-09 | 14 |
membranous layer | 4.05e-09 | 14 |
amnion | 1.07e-08 | 7 |
mesonephric epithelium | 3.57e-08 | 8 |
mesonephric tubule | 3.57e-08 | 8 |
nephric duct | 3.57e-08 | 8 |
renal duct | 3.57e-08 | 8 |
mesonephric duct | 3.57e-08 | 8 |
pronephric duct | 3.57e-08 | 8 |
urothelium | 6.78e-08 | 5 |
somatic layer of lateral plate mesoderm | 1.29e-07 | 8 |
mesonephros | 2.89e-07 | 9 |
pronephros | 2.89e-07 | 9 |
nephrogenic cord | 2.89e-07 | 9 |
pronephric mesoderm | 2.89e-07 | 9 |
rostral part of nephrogenic cord | 2.89e-07 | 9 |
presumptive pronephric mesoderm | 2.89e-07 | 9 |
endoderm-derived structure | 3.45e-07 | 160 |
endoderm | 3.45e-07 | 160 |
presumptive endoderm | 3.45e-07 | 160 |
duct | 6.02e-07 | 19 |